RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 TRPA1O75762 1119 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 PLEKHA8P1O95397 391 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 CYP2C8P10632 490 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 BCRP11274 1271 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 ALAS1P13196 640 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 ADCY7P51828 1080 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 NLRP5P59047 1200 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 NTRK3Q16288 839 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 KIAA1755Q5JYT7 1200 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 TTBK2Q6IQ55 1244 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 C17orf99Q6UX52 265 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 ANKRD35Q8N283 1001 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 CCDC82Q8N4S0 544 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 MSL3Q8N5Y2 521 aaKnown RBP9.11□□□□□ -0.95
SSBP3-211ENST00000528787 JMYQ8N9B5 988 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 NSUN7Q8NE18 718 aaKnown RBP9.11□□□□□ -0.95
SSBP3-211ENST00000528787 DNERQ8NFT8 737 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 SMARCC2Q8TAQ2 1214 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 DDX11Q96FC9 970 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 C8orf76Q96K31 380 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 TRERF1Q96PN7 1200 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 PSTPIP2Q9H939 334 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 NCOA5Q9HCD5 579 aaKnown RBP9.11□□□□□ -0.95
SSBP3-211ENST00000528787 RNF146Q9NTX7 359 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 FAM217BQ9NTX9 383 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-211ENST00000528787 FBXO28Q9NVF7 368 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 ZNF214Q9UL59 606 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-211ENST00000528787 DIS3Q9Y2L1 958 aaKnown RBP9.11□□□□□ -0.95
SSBP3-211ENST00000528787 MGAMO43451 1857 aa9.11□□□□□ -0.95
SSBP3-211ENST00000528787 CASP8AP2Q9UKL3 1982 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 SLC15A5A6NIM6 579 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 SPDYE3A6NKU9 549 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 GCOM1H8Y6P7 765 aaPredicted RBP9.1□□□□□ -0.95
SSBP3-211ENST00000528787 PIK3CDO00329 1044 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 STAM2O75886 525 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 POLR2MP0CAP2 368 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 FUT2Q10981 343 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 IRF5Q13568 498 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 TMEM132BQ14DG7 1078 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 PKN2Q16513 984 aaKnown RBP9.1□□□□□ -0.95
SSBP3-211ENST00000528787 USH1GQ495M9 461 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 WDR78Q5VTH9 848 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 LARP1BQ659C4 914 aaKnown RBP9.1□□□□□ -0.95
SSBP3-211ENST00000528787 XRRA1Q6P2D8 792 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 RNF207Q6ZRF8 634 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 PLEKHH3Q7Z736 793 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 NBPF11Q86T75 865 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 NECAB1Q8N987 351 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 NKX2-3Q8TAU0 364 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 PHKBQ93100 1093 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 MMP19Q99542 508 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 NUDT12Q9BQG2 462 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 ALG1Q9BT22 464 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 ZMYND12Q9H0C1 365 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 RAVER2Q9HCJ3 691 aaKnown RBP9.1□□□□□ -0.95
SSBP3-211ENST00000528787 RIC8AQ9NPQ8 531 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 WBP1LQ9NX94 342 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 RBPJLQ9UBG7 517 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 ZNF236Q9UL36 1845 aa9.1□□□□□ -0.95
SSBP3-211ENST00000528787 ADGRA2Q96PE1 1338 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 SMCO2A6NFE2 343 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 ASB14A6NK59 587 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 GPR25O00155 361 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 CYTH3O43739 400 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 CAPN2P17655 700 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 ERCC3P19447 782 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 GJB2P29033 226 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 KRT2P35908 639 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 RGS2P41220 211 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 CTCFP49711 727 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-211ENST00000528787 NUCB2P80303 420 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 LACTBP83111 547 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-211ENST00000528787 GHRHRQ02643 423 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 KRT25Q7Z3Z0 450 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 ZNF467Q7Z7K2 595 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-211ENST00000528787 DPP9Q86TI2 863 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 RAB11FIP4Q86YS3 637 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 REXO1Q8N1G1 1221 aaKnown RBP9.09□□□□□ -0.95
SSBP3-211ENST00000528787 DNAJC5GQ8N7S2 189 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 DAGLBQ8NCG7 672 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 REPS2Q8NFH8 660 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 IWS1Q96ST2 819 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 LARP6Q9BRS8 491 aaKnown RBP9.09□□□□□ -0.95
SSBP3-211ENST00000528787 MOV10L1Q9BXT6 1211 aaKnown RBP9.09□□□□□ -0.95
SSBP3-211ENST00000528787 ZSCAN16Q9H4T2 348 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-211ENST00000528787 CPA4Q9UI42 421 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 NOL7Q9UMY1 257 aaKnown RBP9.09□□□□□ -0.95
SSBP3-211ENST00000528787 PCDHA4Q9UN74 947 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 PLXNB2O15031 1838 aa9.09□□□□□ -0.95
SSBP3-211ENST00000528787 ZNFX1Q9P2E3 1918 aaKnown RBP9.09□□□□□ -0.95
SSBP3-211ENST00000528787 CCDC194A0A1B0GVG4 234 aa9.08□□□□□ -0.96
SSBP3-211ENST00000528787 STXBP3O00186 592 aa9.08□□□□□ -0.96
SSBP3-211ENST00000528787 XRCC5P13010 732 aaKnown RBP9.08□□□□□ -0.96
SSBP3-211ENST00000528787 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
SSBP3-211ENST00000528787 ORC2Q13416 577 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-211ENST00000528787 DGKZQ13574 1117 aa9.08□□□□□ -0.96
SSBP3-211ENST00000528787 KCNV1Q6PIU1 500 aa9.08□□□□□ -0.96
SSBP3-211ENST00000528787 BRAPQ7Z569 592 aa9.08□□□□□ -0.96
SSBP3-211ENST00000528787 FBXO18Q8NFZ0 1043 aa9.08□□□□□ -0.96
SSBP3-211ENST00000528787 NSUN6Q8TEA1 469 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms