RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 F5H6K3 240 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 NEMFO60524 1076 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 ICA1Q05084 483 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 KLRC3Q07444 240 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 SF3B2Q13435 895 aaKnown RBP15.3■□□□□ 0.04
SEC16B-208ENST00000528461 UBE2SQ16763 222 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 CCDC96Q2M329 555 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 SPDYE2Q495Y8 402 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 MTMR14Q8NCE2 650 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 PKNOX2Q96KN3 472 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 CSRNP1Q96S65 589 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 P2RX7Q99572 595 aaKnown RBP15.3■□□□□ 0.04
SEC16B-208ENST00000528461 CLRN2A0PK11 232 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 GH2P01242 217 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 QRICH1Q2TAL8 776 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 GMCL1Q96IK5 515 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 TCP10L2B9ZVM9 353 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 KLRC4O43908 158 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 TDP2O95551 362 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 TPM4P67936 248 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 KIAA1755Q5JYT7 1200 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 FAM151AQ8WW52 585 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 ZNRF3Q9ULT6 936 aa15.3■□□□□ 0.04
SEC16B-208ENST00000528461 NDUFB10O96000 172 aa15.29■□□□□ 0.04
SEC16B-208ENST00000528461 SLC1A4P43007 532 aa15.29■□□□□ 0.04
SEC16B-208ENST00000528461 UBASH3AP57075 661 aa15.29■□□□□ 0.04
SEC16B-208ENST00000528461 FBXO41Q8TF61 875 aa15.29■□□□□ 0.04
SEC16B-208ENST00000528461 AK8Q96MA6 479 aa15.29■□□□□ 0.04
SEC16B-208ENST00000528461 NUP88Q99567 741 aaPredicted RBP15.29■□□□□ 0.04
SEC16B-208ENST00000528461 DACH1Q9UI36 760 aa15.29■□□□□ 0.04
SEC16B-208ENST00000528461 TMC6Q7Z403 805 aa15.29■□□□□ 0.04
SEC16B-208ENST00000528461 TGFB2P61812 414 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 CXCL9Q07325 125 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 HSP90AA4PQ58FG1 418 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 CDKAL1Q5VV42 579 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 VSTM4Q8IW00 320 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 HERC5Q9UII4 1024 aaKnown RBP15.28■□□□□ 0.04
SEC16B-208ENST00000528461 STAT6P42226 847 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 PTPN21Q16825 1174 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 CRYGNQ8WXF5 182 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 ZBTB7AO95365 584 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 TECP42680 631 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 DLGAP5Q15398 846 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 PPP4R3AQ6IN85 833 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 BTNL9Q6UXG8 535 aa15.28■□□□□ 0.04
SEC16B-208ENST00000528461 SHTN1A0MZ66 631 aa15.27■□□□□ 0.04
SEC16B-208ENST00000528461 RPN1P04843 607 aaKnown RBP15.27■□□□□ 0.04
SEC16B-208ENST00000528461 PLCG1P19174 1290 aa15.27■□□□□ 0.04
SEC16B-208ENST00000528461 FXR2P51116 673 aaKnown RBP eCLIP15.27■□□□□ 0.04
SEC16B-208ENST00000528461 TBX2Q13207 712 aaPredicted RBP15.27■□□□□ 0.04
SEC16B-208ENST00000528461 CDC37Q16543 378 aaPredicted RBP15.27■□□□□ 0.04
SEC16B-208ENST00000528461 SPATA1Q5VX52 437 aa15.27■□□□□ 0.04
SEC16B-208ENST00000528461 RRAGBQ5VZM2 374 aa15.27■□□□□ 0.04
SEC16B-208ENST00000528461 AGBL3Q8NEM8 1001 aa15.27■□□□□ 0.04
SEC16B-208ENST00000528461 HAS1Q92839 578 aa15.27■□□□□ 0.04
SEC16B-208ENST00000528461 CCDC34Q96HJ3 373 aa15.27■□□□□ 0.04
SEC16B-208ENST00000528461 PLIN2Q99541 437 aa15.27■□□□□ 0.04
SEC16B-208ENST00000528461 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.04
SEC16B-208ENST00000528461 MEIS2O14770 477 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 TERF1P54274 439 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 RBM26Q5T8P6 1007 aaKnown RBP15.27■□□□□ 0.03
SEC16B-208ENST00000528461 FKBP1CQ5VVH2 108 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 CUL5Q93034 780 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 PSTPIP2Q9H939 334 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 PIM2Q9P1W9 311 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 OPLAHO14841 1288 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 UBA7P41226 1012 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 ECE1P42892 770 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 GSDMDP57764 484 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 MAP3K10Q02779 954 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 ZNF658Q5TYW1 1059 aaPredicted RBP15.27■□□□□ 0.03
SEC16B-208ENST00000528461 CABP7Q86V35 215 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.27■□□□□ 0.03
SEC16B-208ENST00000528461 KCND1Q9NSA2 647 aa15.27■□□□□ 0.03
SEC16B-208ENST00000528461 USP17L15C9J2P7 530 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 USP17L13C9JLJ4 530 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 USP17L11C9JVI0 530 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 USP17L18D6R9N7 530 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 USP17L22D6RA61 530 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 USP17L17D6RBQ6 530 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 USP17L19D6RCP7 530 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 USP17L20D6RJB6 530 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 SERPINC1P01008 464 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 SKILP12757 684 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 TXLNAP40222 546 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 SNAP25P60880 206 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 USP17L24Q0WX57 530 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 NR1I3Q14994 352 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 USP17L6PQ6QN14 398 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 TRIM34Q9BYJ4 488 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 TMX1Q9H3N1 280 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 SYNPO2Q9UMS6 1093 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 USP27XA6NNY8 438 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 NFKBIEO00221 500 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 STX17P56962 302 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 GRB10Q13322 594 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 ACER1Q8TDN7 264 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 PNMA5Q96PV4 448 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 TMEM39BQ9GZU3 492 aa15.26■□□□□ 0.03
SEC16B-208ENST00000528461 GDAQ9Y2T3 454 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms