RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	PGK1	P00558	417 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	MYCN	P04198	464 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	NEFL	P07196	543 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	BAAT	Q14032	418 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	COL9A3	Q14050	684 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	CDC37	Q16543	378 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	SLC30A10	Q6XR72	485 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	CHST3	Q7LGC8	479 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	ADGRF4	Q8IZF3	695 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	STAG2	Q8N3U4	1231 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	ABHD16B	Q9H3Z7	469 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	PNMA2	Q9UL42	364 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	FAM184B	Q9ULE4	1060 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	COLQ	Q9Y215	455 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	ASB14	A6NK59	587 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	ADCY6	O43306	1168 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	ADAMTS4	O75173	837 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	CDC45	O75419	566 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	NECTIN1	Q15223	517 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	USH1G	Q495M9	461 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	CREB3L3	Q68CJ9	461 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	CHRDL2	Q6WN34	429 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	IGDCC4	Q8TDY8	1250 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	JMJD4	Q9H9V9	463 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	GPHN	Q9NQX3	736 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	MAD2L2	Q9UI95	211 aa		13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMC3-205	ENST00000528362	SYNRG	Q9UMZ2	1314 aa		13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	ERICH2	A1L162	156 aa		13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	PTPDC1	A2A3K4	754 aa		13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	PALM3	A6NDB9	673 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	ATN1	P54259	1190 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	WTAP	Q15007	396 aa		13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	SART3	Q15020	963 aa	Known RBP	13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	SLC35G1	Q2M3R5	365 aa		13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	QRICH1	Q2TAL8	776 aa		13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	CCDC144B	Q3MJ40	725 aa		13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	TMEM67	Q5HYA8	995 aa		13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	MORC4	Q8TE76	937 aa		13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	PRO3102	Q9H379	93 aa		13.72	□□□□□ -0.21
PSMC3-205	ENST00000528362	MYADML2	A6NDP7	307 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	KLRF2	D3W0D1	207 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	PRC1	O43663	620 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	DHX16	O60231	1041 aa	Known RBP	13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	DUSP11	O75319	330 aa	Known RBP	13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	CALML3	P27482	149 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	ADCYAP1R1	P41586	468 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	ALDH5A1	P51649	535 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	RPS6	P62753	249 aa	Known RBP	13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	TROAP	Q12815	778 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	GRM4	Q14833	912 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	RNF207	Q6ZRF8	634 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	RNF180	Q86T96	592 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	MTMR8	Q96EF0	704 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	LY9	Q9HBG7	655 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	VAT1L	Q9HCJ6	419 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	PHF24	Q9UPV7	400 aa		13.71	□□□□□ -0.21
PSMC3-205	ENST00000528362	ABCB11	O95342	1321 aa		13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	PPP1R11	O60927	126 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	SYN1	P17600	705 aa		13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	RTP1	P59025	263 aa		13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	IRX5	P78411	483 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	CASC1	Q6TDU7	716 aa		13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	FBXO16	Q8IX29	292 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	RGS22	Q8NE09	1264 aa		13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	KLHDC9	Q8NEP7	349 aa		13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	FERMT2	Q96AC1	680 aa		13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	UPF3A	Q9H1J1	476 aa	Known RBP	13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	RBM27	Q9P2N5	1060 aa	Known RBP	13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	ADD3	Q9UEY8	706 aa	Known RBP	13.7	□□□□□ -0.22
PSMC3-205	ENST00000528362	SH2B2	O14492	632 aa	Predicted RBP	13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	PTGS1	P23219	599 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	EDNRB	P24530	442 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	CST5	P28325	142 aa	Predicted RBP	13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	MCM5	P33992	734 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	FXR1	P51114	621 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	SNX17	Q15036	470 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	TAPT1	Q6NXT6	567 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	SLC39A5	Q6ZMH5	540 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	EEPD1	Q7L9B9	569 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	CATIP	Q7Z7H3	387 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	FBXO11	Q86XK2	927 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	TBC1D5	Q92609	795 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	MTA3	Q9BTC8	594 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	VTA1	Q9NP79	307 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	PDGFC	Q9NRA1	345 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	GNE	Q9Y223	722 aa	Known RBP	13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	LAMA3	Q16787	3333 aa		13.69	□□□□□ -0.22
PSMC3-205	ENST00000528362	LOC102724159	A0A0B4J2E5	919 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362		A0A1W2PQ45	241 aa	Predicted RBP	13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362		A0A1W2PQY0	241 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	OPLAH	O14841	1288 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	ZBTB5	O15062	677 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	CTAGE5	O15320	804 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	CYTH3	O43739	400 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	DDAH1	O94760	285 aa		13.68	□□□□□ -0.22
PSMC3-205	ENST00000528362	C6orf222	P0C671	652 aa	Predicted RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms