RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 STOX1Q6ZVD7 989 aa38.61■■■■□ 3.77
SSSCA1-205ENST00000527920 PHF24Q9UPV7 400 aa38.61■■■■□ 3.77
SSSCA1-205ENST00000527920 ASTN1O14525 1302 aa38.61■■■■□ 3.77
SSSCA1-205ENST00000527920 ADAMTS4O75173 837 aa38.6■■■■□ 3.77
SSSCA1-205ENST00000527920 SART3Q15020 963 aaKnown RBP38.6■■■■□ 3.77
SSSCA1-205ENST00000527920 CCDC136Q96JN2 1154 aa38.6■■■■□ 3.77
SSSCA1-205ENST00000527920 PGK1P00558 417 aa38.59■■■■□ 3.77
SSSCA1-205ENST00000527920 RANBP2P49792 3224 aaKnown RBP38.59■■■■□ 3.77
SSSCA1-205ENST00000527920 CCDC144BQ3MJ40 725 aa38.59■■■■□ 3.77
SSSCA1-205ENST00000527920 SKAP1Q86WV1 359 aa38.59■■■■□ 3.77
SSSCA1-205ENST00000527920 ADGRF4Q8IZF3 695 aa38.59■■■■□ 3.77
SSSCA1-205ENST00000527920 MORC4Q8TE76 937 aa38.59■■■■□ 3.77
SSSCA1-205ENST00000527920 ADD3Q9UEY8 706 aaKnown RBP38.59■■■■□ 3.77
SSSCA1-205ENST00000527920 TRIOBPQ9H2D6 2365 aa38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 ERICH2A1L162 156 aa38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 IFIT3O14879 490 aaKnown RBP38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 SLC34A2O95436 690 aa38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 BAATQ14032 418 aaPredicted RBP38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 SNX17Q15036 470 aa38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 CDC37Q16543 378 aaPredicted RBP38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 RGS22Q8NE09 1264 aa38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 TSEN34Q9BSV6 310 aaKnown RBP38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 CPVLQ9H3G5 476 aa38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 SYNRGQ9UMZ2 1314 aa38.58■■■■□ 3.77
SSSCA1-205ENST00000527920 MYCNP04198 464 aaPredicted RBP38.57■■■■□ 3.76
SSSCA1-205ENST00000527920 C1orf53Q5VUE5 145 aa38.57■■■■□ 3.76
SSSCA1-205ENST00000527920 MB21D2Q8IYB1 491 aaPredicted RBP38.57■■■■□ 3.76
SSSCA1-205ENST00000527920 LENG1Q96BZ8 264 aaPredicted RBP38.57■■■■□ 3.76
SSSCA1-205ENST00000527920 MTA3Q9BTC8 594 aa38.57■■■■□ 3.76
SSSCA1-205ENST00000527920 RBM27Q9P2N5 1060 aaKnown RBP38.57■■■■□ 3.76
SSSCA1-205ENST00000527920 ZMYND8Q9ULU4 1186 aaPredicted RBP38.57■■■■□ 3.76
SSSCA1-205ENST00000527920 ADCYAP1R1P41586 468 aa38.56■■■■□ 3.76
SSSCA1-205ENST00000527920 KLHDC9Q8NEP7 349 aa38.56■■■■□ 3.76
SSSCA1-205ENST00000527920 MCM3APO60318 1980 aa38.56■■■■□ 3.76
SSSCA1-205ENST00000527920 CST5P28325 142 aaPredicted RBP38.55■■■■□ 3.76
SSSCA1-205ENST00000527920 ATN1P54259 1190 aaPredicted RBP38.55■■■■□ 3.76
SSSCA1-205ENST00000527920 SLC39A5Q6ZMH5 540 aa38.55■■■■□ 3.76
SSSCA1-205ENST00000527920 UPF3AQ9H1J1 476 aaKnown RBP38.55■■■■□ 3.76
SSSCA1-205ENST00000527920 A0A1W2PPC1 479 aa38.54■■■■□ 3.76
SSSCA1-205ENST00000527920 PTPDC1A2A3K4 754 aa38.54■■■■□ 3.76
SSSCA1-205ENST00000527920 WTAPQ15007 396 aa38.54■■■■□ 3.76
SSSCA1-205ENST00000527920 RNF207Q6ZRF8 634 aa38.54■■■■□ 3.76
SSSCA1-205ENST00000527920 GDF15Q99988 308 aa38.54■■■■□ 3.76
SSSCA1-205ENST00000527920 JMJD4Q9H9V9 463 aa38.54■■■■□ 3.76
SSSCA1-205ENST00000527920 ABCB11O95342 1321 aa38.54■■■■□ 3.76
SSSCA1-205ENST00000527920 PALM3A6NDB9 673 aaPredicted RBP38.53■■■■□ 3.76
SSSCA1-205ENST00000527920 ANTXR2P58335 489 aa38.53■■■■□ 3.76
SSSCA1-205ENST00000527920 RTP1P59025 263 aa38.53■■■■□ 3.76
SSSCA1-205ENST00000527920 ANO2Q9NQ90 1003 aa38.53■■■■□ 3.76
SSSCA1-205ENST00000527920 MAD2L2Q9UI95 211 aa38.53■■■■□ 3.76
SSSCA1-205ENST00000527920 LCTP09848 1927 aa38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 MOXD2PA6NHM9 499 aa38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 ADCY6O43306 1168 aa38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 ALDH5A1P51649 535 aaPredicted RBP38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 RPS6P62753 249 aaKnown RBP38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 NKX3-2P78367 333 aa38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 NECTIN1Q15223 517 aa38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 QRICH1Q2TAL8 776 aa38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 CCSAPQ6IQ19 270 aaPredicted RBP38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 SLC30A10Q6XR72 485 aa38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 STAG2Q8N3U4 1231 aa38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 SPC25Q9HBM1 224 aa38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 VTA1Q9NP79 307 aa38.52■■■■□ 3.76
SSSCA1-205ENST00000527920 KLRF2D3W0D1 207 aa38.51■■■■□ 3.76
SSSCA1-205ENST00000527920 SLC27A2O14975 620 aa38.51■■■■□ 3.76
SSSCA1-205ENST00000527920 BMP8BP34820 402 aa38.51■■■■□ 3.76
SSSCA1-205ENST00000527920 GJA9P57773 515 aa38.51■■■■□ 3.76
SSSCA1-205ENST00000527920 USH1GQ495M9 461 aa38.51■■■■□ 3.76
SSSCA1-205ENST00000527920 CASC1Q6TDU7 716 aa38.51■■■■□ 3.76
SSSCA1-205ENST00000527920 DNERQ8NFT8 737 aa38.51■■■■□ 3.76
SSSCA1-205ENST00000527920 IGDCC4Q8TDY8 1250 aa38.51■■■■□ 3.76
SSSCA1-205ENST00000527920 MTMR8Q96EF0 704 aa38.51■■■■□ 3.76
SSSCA1-205ENST00000527920 SYN1P17600 705 aa38.5■■■■□ 3.75
SSSCA1-205ENST00000527920 TROAPQ12815 778 aa38.5■■■■□ 3.75
SSSCA1-205ENST00000527920 GRM4Q14833 912 aa38.5■■■■□ 3.75
SSSCA1-205ENST00000527920 TMEM67Q5HYA8 995 aa38.5■■■■□ 3.75
SSSCA1-205ENST00000527920 FERMT2Q96AC1 680 aa38.5■■■■□ 3.75
SSSCA1-205ENST00000527920 PURBQ96QR8 312 aaKnown RBP38.5■■■■□ 3.75
SSSCA1-205ENST00000527920 LRRC37A2A6NM11 1700 aa38.49■■■■□ 3.75
SSSCA1-205ENST00000527920 DNAH12Q6ZR08 3092 aa38.49■■■■□ 3.75
SSSCA1-205ENST00000527920 DHX16O60231 1041 aaKnown RBP38.49■■■■□ 3.75
SSSCA1-205ENST00000527920 CDC45O75419 566 aa38.49■■■■□ 3.75
SSSCA1-205ENST00000527920 NEFLP07196 543 aa38.49■■■■□ 3.75
SSSCA1-205ENST00000527920 CALML3P27482 149 aa38.49■■■■□ 3.75
SSSCA1-205ENST00000527920 TNFAIP2Q03169 654 aa38.49■■■■□ 3.75
SSSCA1-205ENST00000527920 FBXO11Q86XK2 927 aa38.49■■■■□ 3.75
SSSCA1-205ENST00000527920 A0A1W2PQ45 241 aaPredicted RBP38.48■■■■□ 3.75
SSSCA1-205ENST00000527920 A0A1W2PQY0 241 aa38.48■■■■□ 3.75
SSSCA1-205ENST00000527920 ACLYP53396 1101 aa38.48■■■■□ 3.75
SSSCA1-205ENST00000527920 CREB3L3Q68CJ9 461 aa38.48■■■■□ 3.75
SSSCA1-205ENST00000527920 IQSEC1Q6DN90 963 aa38.48■■■■□ 3.75
SSSCA1-205ENST00000527920 CHST3Q7LGC8 479 aa38.48■■■■□ 3.75
SSSCA1-205ENST00000527920 PCSK9Q8NBP7 692 aaKnown RBP38.48■■■■□ 3.75
SSSCA1-205ENST00000527920 SENP2Q9HC62 589 aa38.48■■■■□ 3.75
SSSCA1-205ENST00000527920 C6orf222P0C671 652 aaPredicted RBP38.47■■■■□ 3.75
SSSCA1-205ENST00000527920 FXR1P51114 621 aaKnown RBP eCLIP38.47■■■■□ 3.75
SSSCA1-205ENST00000527920 TAPT1Q6NXT6 567 aa38.47■■■■□ 3.75
SSSCA1-205ENST00000527920 CATIPQ7Z7H3 387 aa38.47■■■■□ 3.75
SSSCA1-205ENST00000527920 MCF2L2Q86YR7 1114 aa38.47■■■■□ 3.75
SSSCA1-205ENST00000527920 NUP133Q8WUM0 1156 aa38.47■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms