RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 TRIM60Q495X7 471 aa22.59■■□□□ 1.21
CAPN1-211ENST00000527739 LBHD1Q9BQE6 289 aaPredicted RBP22.59■■□□□ 1.21
CAPN1-211ENST00000527739 PRDM5Q9NQX1 630 aaPredicted RBP22.59■■□□□ 1.21
CAPN1-211ENST00000527739 CYP39A1Q9NYL5 469 aa22.59■■□□□ 1.21
CAPN1-211ENST00000527739 PHF24Q9UPV7 400 aa22.59■■□□□ 1.21
CAPN1-211ENST00000527739 RAD50Q92878 1312 aa22.58■■□□□ 1.21
CAPN1-211ENST00000527739 PTPDC1A2A3K4 754 aa22.58■■□□□ 1.21
CAPN1-211ENST00000527739 TRDNQ13061 729 aa22.58■■□□□ 1.21
CAPN1-211ENST00000527739 BAATQ14032 418 aaPredicted RBP22.58■■□□□ 1.21
CAPN1-211ENST00000527739 GPATCH4Q5T3I0 446 aaKnown RBP22.58■■□□□ 1.21
CAPN1-211ENST00000527739 SPC25Q9HBM1 224 aa22.58■■□□□ 1.21
CAPN1-211ENST00000527739 TNKSO95271 1327 aa22.57■■□□□ 1.2
CAPN1-211ENST00000527739 DUSP11O75319 330 aaKnown RBP22.57■■□□□ 1.2
CAPN1-211ENST00000527739 C6orf222P0C671 652 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-211ENST00000527739 SNHG28P0DPA3 235 aa22.57■■□□□ 1.2
CAPN1-211ENST00000527739 PTH1RQ03431 593 aa22.57■■□□□ 1.2
CAPN1-211ENST00000527739 EEPD1Q7L9B9 569 aa22.57■■□□□ 1.2
CAPN1-211ENST00000527739 ENAHQ8N8S7 591 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-211ENST00000527739 PURBQ96QR8 312 aaKnown RBP22.57■■□□□ 1.2
CAPN1-211ENST00000527739 CPVLQ9H3G5 476 aa22.57■■□□□ 1.2
CAPN1-211ENST00000527739 STXBP5LQ9Y2K9 1186 aa22.57■■□□□ 1.2
CAPN1-211ENST00000527739 DDX49Q9Y6V7 483 aaKnown RBP22.57■■□□□ 1.2
CAPN1-211ENST00000527739 SYNRGQ9UMZ2 1314 aa22.57■■□□□ 1.2
CAPN1-211ENST00000527739 NFIBO00712 420 aa22.56■■□□□ 1.2
CAPN1-211ENST00000527739 DHX16O60231 1041 aaKnown RBP22.56■■□□□ 1.2
CAPN1-211ENST00000527739 ADAMTS4O75173 837 aa22.56■■□□□ 1.2
CAPN1-211ENST00000527739 KCNA10Q16322 511 aa22.56■■□□□ 1.2
CAPN1-211ENST00000527739 VTI1AQ96AJ9 217 aa22.56■■□□□ 1.2
CAPN1-211ENST00000527739 PNMA2Q9UL42 364 aa22.56■■□□□ 1.2
CAPN1-211ENST00000527739 U3KPZ7 1027 aaPredicted RBP22.56■■□□□ 1.2
CAPN1-211ENST00000527739 A0A0C4DFX4 3053 aa22.56■■□□□ 1.2
CAPN1-211ENST00000527739 A0A1W2PQ45 241 aaPredicted RBP22.55■■□□□ 1.2
CAPN1-211ENST00000527739 A0A1W2PQY0 241 aa22.55■■□□□ 1.2
CAPN1-211ENST00000527739 CALML3P27482 149 aa22.55■■□□□ 1.2
CAPN1-211ENST00000527739 ACLYP53396 1101 aa22.55■■□□□ 1.2
CAPN1-211ENST00000527739 IRX5P78411 483 aaPredicted RBP22.55■■□□□ 1.2
CAPN1-211ENST00000527739 TNFAIP2Q03169 654 aa22.55■■□□□ 1.2
CAPN1-211ENST00000527739 USH1GQ495M9 461 aa22.55■■□□□ 1.2
CAPN1-211ENST00000527739 IFIT1BQ5T764 474 aaKnown RBP22.55■■□□□ 1.2
CAPN1-211ENST00000527739 ANKS1AQ92625 1134 aa22.55■■□□□ 1.2
CAPN1-211ENST00000527739 TSEN34Q9BSV6 310 aaKnown RBP22.55■■□□□ 1.2
CAPN1-211ENST00000527739 VAT1LQ9HCJ6 419 aa22.55■■□□□ 1.2
CAPN1-211ENST00000527739 LTBP2Q14767 1821 aa22.54■■□□□ 1.2
CAPN1-211ENST00000527739 MYADML2A6NDP7 307 aa22.54■■□□□ 1.2
CAPN1-211ENST00000527739 TLE2Q04725 743 aa22.54■■□□□ 1.2
CAPN1-211ENST00000527739 GNASQ5JWF2 1037 aa22.54■■□□□ 1.2
CAPN1-211ENST00000527739 NUP133Q8WUM0 1156 aa22.54■■□□□ 1.2
CAPN1-211ENST00000527739 STARD7Q9NQZ5 370 aa22.54■■□□□ 1.2
CAPN1-211ENST00000527739 PLXNA1Q9UIW2 1896 aa22.54■■□□□ 1.2
CAPN1-211ENST00000527739 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.53■■□□□ 1.2
CAPN1-211ENST00000527739 ADCY6O43306 1168 aa22.53■■□□□ 1.2
CAPN1-211ENST00000527739 PARP1P09874 1014 aaKnown RBP22.53■■□□□ 1.2
CAPN1-211ENST00000527739 RNF207Q6ZRF8 634 aa22.53■■□□□ 1.2
CAPN1-211ENST00000527739 CYB5R4Q7L1T6 521 aa22.53■■□□□ 1.2
CAPN1-211ENST00000527739 FBXO16Q8IX29 292 aaPredicted RBP22.53■■□□□ 1.2
CAPN1-211ENST00000527739 KLHDC9Q8NEP7 349 aa22.53■■□□□ 1.2
CAPN1-211ENST00000527739 KATNBL1Q9H079 304 aa22.53■■□□□ 1.2
CAPN1-211ENST00000527739 ADD3Q9UEY8 706 aaKnown RBP22.53■■□□□ 1.2
CAPN1-211ENST00000527739 LAMA2P24043 3122 aaKnown RBP22.53■■□□□ 1.2
CAPN1-211ENST00000527739 MOXD2PA6NHM9 499 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 SGSM2O43147 1006 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 PQBP1O60828 265 aaKnown RBP22.52■■□□□ 1.2
CAPN1-211ENST00000527739 CYP21A2P08686 494 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 SNX17Q15036 470 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 ASPRV1Q53RT3 343 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 SLC30A10Q6XR72 485 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 KIAA1211Q6ZU35 1233 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 RALYLQ86SE5 291 aaKnown RBP22.52■■□□□ 1.2
CAPN1-211ENST00000527739 ADGRF4Q8IZF3 695 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 PCSK9Q8NBP7 692 aaKnown RBP22.52■■□□□ 1.2
CAPN1-211ENST00000527739 CLEC4DQ8WXI8 215 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 AP5M1Q9H0R1 490 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 PDGFCQ9NRA1 345 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 ASTN1O14525 1302 aa22.52■■□□□ 1.2
CAPN1-211ENST00000527739 SMCHD1A6NHR9 2005 aa22.52■■□□□ 1.19
CAPN1-211ENST00000527739 ERICH2A1L162 156 aa22.51■■□□□ 1.19
CAPN1-211ENST00000527739 GJA9P57773 515 aa22.51■■□□□ 1.19
CAPN1-211ENST00000527739 CDC37Q16543 378 aaPredicted RBP22.51■■□□□ 1.19
CAPN1-211ENST00000527739 C1orf53Q5VUE5 145 aa22.51■■□□□ 1.19
CAPN1-211ENST00000527739 GLT1D1Q96MS3 346 aa22.51■■□□□ 1.19
CAPN1-211ENST00000527739 FAM161BQ96MY7 647 aa22.51■■□□□ 1.19
CAPN1-211ENST00000527739 GUCD1Q96NT3 240 aa22.51■■□□□ 1.19
CAPN1-211ENST00000527739 WDR19Q8NEZ3 1342 aa22.51■■□□□ 1.19
CAPN1-211ENST00000527739 IFIT3O14879 490 aaKnown RBP22.5■■□□□ 1.19
CAPN1-211ENST00000527739 DYNC1LI2O43237 492 aaPredicted RBP22.5■■□□□ 1.19
CAPN1-211ENST00000527739 ASGR1P07306 291 aa22.5■■□□□ 1.19
CAPN1-211ENST00000527739 ALDH5A1P51649 535 aaPredicted RBP22.5■■□□□ 1.19
CAPN1-211ENST00000527739 BEX3Q00994 111 aa22.5■■□□□ 1.19
CAPN1-211ENST00000527739 IQSEC1Q6DN90 963 aa22.5■■□□□ 1.19
CAPN1-211ENST00000527739 SH3RF1Q7Z6J0 888 aa22.5■■□□□ 1.19
CAPN1-211ENST00000527739 UPF3AQ9H1J1 476 aaKnown RBP22.5■■□□□ 1.19
CAPN1-211ENST00000527739 PDLIM7Q9NR12 457 aa22.5■■□□□ 1.19
CAPN1-211ENST00000527739 TRIM43BA6NCK2 446 aa22.49■■□□□ 1.19
CAPN1-211ENST00000527739 E7EWF7 191 aa22.49■■□□□ 1.19
CAPN1-211ENST00000527739 SMPD1P17405 629 aa22.49■■□□□ 1.19
CAPN1-211ENST00000527739 RPS6P62753 249 aaKnown RBP22.49■■□□□ 1.19
CAPN1-211ENST00000527739 C9orf50Q5SZB4 431 aa22.49■■□□□ 1.19
CAPN1-211ENST00000527739 CCSAPQ6IQ19 270 aaPredicted RBP22.49■■□□□ 1.19
CAPN1-211ENST00000527739 CHST3Q7LGC8 479 aa22.49■■□□□ 1.19
CAPN1-211ENST00000527739 TLK2Q86UE8 772 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms