RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 CHST3Q7LGC8 479 aa19.67■□□□□ 0.74
NR1H3-229ENST00000527464 RGS22Q8NE09 1264 aa19.67■□□□□ 0.74
NR1H3-229ENST00000527464 DIS3LQ8TF46 1054 aaKnown RBP19.67■□□□□ 0.74
NR1H3-229ENST00000527464 MAP3K14Q99558 947 aa19.67■□□□□ 0.74
NR1H3-229ENST00000527464 ABHD16BQ9H3Z7 469 aa19.67■□□□□ 0.74
NR1H3-229ENST00000527464 C11orf49Q9H6J7 331 aa19.67■□□□□ 0.74
NR1H3-229ENST00000527464 MAD2L2Q9UI95 211 aa19.67■□□□□ 0.74
NR1H3-229ENST00000527464 DHX16O60231 1041 aaKnown RBP19.66■□□□□ 0.74
NR1H3-229ENST00000527464 AKR1A1P14550 325 aa19.66■□□□□ 0.74
NR1H3-229ENST00000527464 KRT32Q14532 448 aa19.66■□□□□ 0.74
NR1H3-229ENST00000527464 ARMCX2Q7L311 632 aa19.66■□□□□ 0.74
NR1H3-229ENST00000527464 STAG2Q8N3U4 1231 aa19.66■□□□□ 0.74
NR1H3-229ENST00000527464 CLEC4DQ8WXI8 215 aa19.66■□□□□ 0.74
NR1H3-229ENST00000527464 DPF3Q92784 378 aa19.66■□□□□ 0.74
NR1H3-229ENST00000527464 CPVLQ9H3G5 476 aa19.66■□□□□ 0.74
NR1H3-229ENST00000527464 JMJD4Q9H9V9 463 aa19.66■□□□□ 0.74
NR1H3-229ENST00000527464 LY9Q9HBG7 655 aa19.66■□□□□ 0.74
NR1H3-229ENST00000527464 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.66■□□□□ 0.74
NR1H3-229ENST00000527464 ABCB11O95342 1321 aa19.66■□□□□ 0.74
NR1H3-229ENST00000527464 SOWAHBA6NEL2 793 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 DNM1LO00429 736 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 EPB41L2O43491 1005 aaKnown RBP19.65■□□□□ 0.74
NR1H3-229ENST00000527464 DDAH1O94760 285 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 REC8O95072 547 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 RARBP10826 455 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 COL6A1P12109 1028 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 LIFRP42702 1097 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 TRAF1Q13077 416 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 MTMR8Q96EF0 704 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 SENP2Q9HC62 589 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 ADD3Q9UEY8 706 aaKnown RBP19.65■□□□□ 0.74
NR1H3-229ENST00000527464 FAM184BQ9ULE4 1060 aa19.65■□□□□ 0.74
NR1H3-229ENST00000527464 BAZ2BQ9UIF8 2168 aaKnown RBP19.65■□□□□ 0.74
NR1H3-229ENST00000527464 NFIBO00712 420 aa19.64■□□□□ 0.73
NR1H3-229ENST00000527464 SH2B2O14492 632 aaPredicted RBP19.64■□□□□ 0.73
NR1H3-229ENST00000527464 TAL1P17542 331 aaPredicted RBP19.64■□□□□ 0.73
NR1H3-229ENST00000527464 ACVR2BQ13705 512 aa19.64■□□□□ 0.73
NR1H3-229ENST00000527464 BAATQ14032 418 aaPredicted RBP19.64■□□□□ 0.73
NR1H3-229ENST00000527464 QRICH1Q2TAL8 776 aa19.64■□□□□ 0.73
NR1H3-229ENST00000527464 FBXO11Q86XK2 927 aa19.64■□□□□ 0.73
NR1H3-229ENST00000527464 CCDC144CPQ8IYA2 1237 aa19.64■□□□□ 0.73
NR1H3-229ENST00000527464 NEK1Q96PY6 1258 aa19.64■□□□□ 0.73
NR1H3-229ENST00000527464 RIOX1Q9H6W3 641 aa19.64■□□□□ 0.73
NR1H3-229ENST00000527464 VAT1LQ9HCJ6 419 aa19.64■□□□□ 0.73
NR1H3-229ENST00000527464 NR2E3Q9Y5X4 410 aa19.64■□□□□ 0.73
NR1H3-229ENST00000527464 PTPDC1A2A3K4 754 aa19.63■□□□□ 0.73
NR1H3-229ENST00000527464 KIF5BP33176 963 aa19.63■□□□□ 0.73
NR1H3-229ENST00000527464 USH1GQ495M9 461 aa19.63■□□□□ 0.73
NR1H3-229ENST00000527464 RNF207Q6ZRF8 634 aa19.63■□□□□ 0.73
NR1H3-229ENST00000527464 MCF2L2Q86YR7 1114 aa19.63■□□□□ 0.73
NR1H3-229ENST00000527464 ZNF654Q8IZM8 581 aa19.63■□□□□ 0.73
NR1H3-229ENST00000527464 MORC4Q8TE76 937 aa19.63■□□□□ 0.73
NR1H3-229ENST00000527464 KCNB2Q92953 911 aa19.63■□□□□ 0.73
NR1H3-229ENST00000527464 AMNQ9BXJ7 453 aa19.63■□□□□ 0.73
NR1H3-229ENST00000527464 ZHX1Q9UKY1 873 aaPredicted RBP19.63■□□□□ 0.73
NR1H3-229ENST00000527464 MRPL11Q9Y3B7 192 aaKnown RBP19.63■□□□□ 0.73
NR1H3-229ENST00000527464 CCDC69A6NI79 296 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 ZBTB5O15062 677 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 EVI5O60447 810 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 HMGB1P09429 215 aaKnown RBP19.62■□□□□ 0.73
NR1H3-229ENST00000527464 CALM1P0DP23 149 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 CALM2P0DP24 149 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 CALM3P0DP25 149 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 SMARCA1P28370 1054 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 RPS6P62753 249 aaKnown RBP19.62■□□□□ 0.73
NR1H3-229ENST00000527464 NFXL1Q6ZNB6 911 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 RASEFQ8IZ41 740 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 DNERQ8NFT8 737 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 CTCFLQ8NI51 663 aaPredicted RBP19.62■□□□□ 0.73
NR1H3-229ENST00000527464 XPNPEP3Q9NQH7 507 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 LCTP09848 1927 aa19.62■□□□□ 0.73
NR1H3-229ENST00000527464 ASTN1O14525 1302 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 B4DLN1 442 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 KBTBD13C9JR72 458 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 DUSP11O75319 330 aaKnown RBP19.61■□□□□ 0.73
NR1H3-229ENST00000527464 HSPA4P34932 840 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 GNAQP50148 359 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 MRPL12P52815 198 aaKnown RBP19.61■□□□□ 0.73
NR1H3-229ENST00000527464 LRRC41Q15345 812 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 ANO1Q5XXA6 986 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 DHX32Q7L7V1 743 aaKnown RBP19.61■□□□□ 0.73
NR1H3-229ENST00000527464 RNF180Q86T96 592 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 SGMS1Q86VZ5 419 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 NUP133Q8WUM0 1156 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 MPHOSPH6Q99547 160 aaKnown RBP19.61■□□□□ 0.73
NR1H3-229ENST00000527464 LZTS2Q9BRK4 669 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 KATNBL1Q9H079 304 aa19.61■□□□□ 0.73
NR1H3-229ENST00000527464 GPHNQ9NQX3 736 aaPredicted RBP19.61■□□□□ 0.73
NR1H3-229ENST00000527464 CALML3P27482 149 aa19.6■□□□□ 0.73
NR1H3-229ENST00000527464 ALDH5A1P51649 535 aaPredicted RBP19.6■□□□□ 0.73
NR1H3-229ENST00000527464 EXOSC10Q01780 885 aaKnown RBP19.6■□□□□ 0.73
NR1H3-229ENST00000527464 CCDC144BQ3MJ40 725 aa19.6■□□□□ 0.73
NR1H3-229ENST00000527464 SLC30A10Q6XR72 485 aa19.6■□□□□ 0.73
NR1H3-229ENST00000527464 SAMD3Q8N6K7 520 aa19.6■□□□□ 0.73
NR1H3-229ENST00000527464 VTA1Q9NP79 307 aa19.6■□□□□ 0.73
NR1H3-229ENST00000527464 SLC12A7Q9Y666 1083 aa19.6■□□□□ 0.73
NR1H3-229ENST00000527464 ALPK3Q96L96 1907 aa19.6■□□□□ 0.73
NR1H3-229ENST00000527464 PNMA6FA0A0J9YX94 578 aa19.59■□□□□ 0.73
NR1H3-229ENST00000527464 COL9A3Q14050 684 aaPredicted RBP19.59■□□□□ 0.73
NR1H3-229ENST00000527464 GJC2Q5T442 439 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms