RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 KIF13BQ9NQT8 1826 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 TMEM232C9JQI7 657 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 SFPQP23246 707 aaKnown RBP eCLIP17.98■□□□□ 0.47
USH1C-204ENST00000526313 SLC16A2P36021 539 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 BAG6P46379 1132 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 TMX1Q9H3N1 280 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 SYNPO2Q9UMS6 1093 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 ATF5Q9Y2D1 282 aaPredicted RBP17.98■□□□□ 0.47
USH1C-204ENST00000526313 SYNRGQ9UMZ2 1314 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 COL4A5P29400 1685 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 A0A1B0GTH6 734 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 SPDYE2BA6NHP3 402 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 SPDYE6P0CI01 402 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 DPEP1P16444 411 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 CDK11BP21127 795 aaKnown RBP17.98■□□□□ 0.47
USH1C-204ENST00000526313 FXR2P51116 673 aaKnown RBP eCLIP17.98■□□□□ 0.47
USH1C-204ENST00000526313 MRPL12P52815 198 aaKnown RBP17.98■□□□□ 0.47
USH1C-204ENST00000526313 ABCB5Q2M3G0 1257 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 PPP4R3AQ6IN85 833 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 CABP7Q86V35 215 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 SMYD4Q8IYR2 804 aaPredicted RBP17.98■□□□□ 0.47
USH1C-204ENST00000526313 GMCL1Q96IK5 515 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 MMTAG2Q9BU76 263 aaKnown RBP17.98■□□□□ 0.47
USH1C-204ENST00000526313 TRIM34Q9BYJ4 488 aa17.98■□□□□ 0.47
USH1C-204ENST00000526313 KLRC4O43908 158 aa17.97■□□□□ 0.47
USH1C-204ENST00000526313 SLC1A4P43007 532 aa17.97■□□□□ 0.47
USH1C-204ENST00000526313 ICA1Q05084 483 aa17.97■□□□□ 0.47
USH1C-204ENST00000526313 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
USH1C-204ENST00000526313 CUL5Q93034 780 aa17.97■□□□□ 0.47
USH1C-204ENST00000526313 GLT8D2Q9H1C3 349 aa17.97■□□□□ 0.47
USH1C-204ENST00000526313 RWDD2AQ9UIY3 292 aa17.97■□□□□ 0.47
USH1C-204ENST00000526313 JAG1P78504 1218 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 RRP1BQ14684 758 aaKnown RBP17.96■□□□□ 0.47
USH1C-204ENST00000526313 MYRIPQ8NFW9 859 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 HERC5Q9UII4 1024 aaKnown RBP17.96■□□□□ 0.47
USH1C-204ENST00000526313 ARFGEF1Q9Y6D6 1849 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 F5H6K3 240 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 PSMD14O00487 310 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 PLCG1P19174 1290 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 KLRC3Q07444 240 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 PDIA5Q14554 519 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 QRICH1Q2TAL8 776 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 KLHL10Q6JEL2 608 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 DEFB132Q7Z7B7 95 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 CCAR2Q8N163 923 aaKnown RBP17.96■□□□□ 0.47
USH1C-204ENST00000526313 PSTPIP2Q9H939 334 aa17.96■□□□□ 0.47
USH1C-204ENST00000526313 LRRC10BA6NIK2 292 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 RHOBTB3O94955 611 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 TECP42680 631 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 CALCRLQ16602 461 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 NYAP1Q6ZVC0 841 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 MTMR14Q8NCE2 650 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 UQCRHLA0A096LP55 91 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 SLC37A4O43826 429 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 TDP2O95551 362 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 UQCRHP07919 91 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 GTF2F1P35269 517 aaKnown RBP eCLIP17.95■□□□□ 0.46
USH1C-204ENST00000526313 STX17P56962 302 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 HSP90AA4PQ58FG1 418 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 RBM26Q5T8P6 1007 aaKnown RBP17.95■□□□□ 0.46
USH1C-204ENST00000526313 FKBP1CQ5VVH2 108 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 BTNL9Q6UXG8 535 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 LARGE2Q8N3Y3 721 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 CCDC112Q8NEF3 446 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 FAM151AQ8WW52 585 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 CSRNP1Q96S65 589 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 C7orf25Q9BPX7 421 aa17.95■□□□□ 0.46
USH1C-204ENST00000526313 ADD3Q9UEY8 706 aaKnown RBP17.95■□□□□ 0.46
USH1C-204ENST00000526313 USP27XA6NNY8 438 aa17.94■□□□□ 0.46
USH1C-204ENST00000526313 GDF11O95390 407 aa17.94■□□□□ 0.46
USH1C-204ENST00000526313 UBE2SQ16763 222 aa17.94■□□□□ 0.46
USH1C-204ENST00000526313 TPD52L1Q16890 204 aaPredicted RBP17.94■□□□□ 0.46
USH1C-204ENST00000526313 E4F1Q66K89 784 aaPredicted RBP17.94■□□□□ 0.46
USH1C-204ENST00000526313 SPECC1LQ69YQ0 1117 aa17.94■□□□□ 0.46
USH1C-204ENST00000526313 ADSSL1Q8N142 457 aa17.94■□□□□ 0.46
USH1C-204ENST00000526313 ZNF277Q9NRM2 450 aaPredicted RBP17.94■□□□□ 0.46
USH1C-204ENST00000526313 ZNF70Q9UC06 446 aaPredicted RBP17.94■□□□□ 0.46
USH1C-204ENST00000526313 PSDA5PKW4 1024 aaPredicted RBP17.93■□□□□ 0.46
USH1C-204ENST00000526313 RAD17O75943 681 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 NDUFB10O96000 172 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 PBX1P40424 430 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 PRCPP42785 496 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 PAK1Q13153 545 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 SF3B2Q13435 895 aaKnown RBP17.93■□□□□ 0.46
USH1C-204ENST00000526313 SPDYE2Q495Y8 402 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 KMT5BQ4FZB7 885 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 GIMAP8Q8ND71 665 aaPredicted RBP17.93■□□□□ 0.46
USH1C-204ENST00000526313 CTAGE1Q96RT6 745 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 HDAC9Q9UKV0 1011 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 CTNND2Q9UQB3 1225 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 CNTNAP1P78357 1384 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 GH2P01242 217 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 GCFC2P16383 781 aaKnown RBP17.93■□□□□ 0.46
USH1C-204ENST00000526313 TXKP42681 527 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 TNNI2P48788 182 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 DLGAP5Q15398 846 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 CDC37Q16543 378 aaPredicted RBP17.93■□□□□ 0.46
USH1C-204ENST00000526313 RASSF8Q8NHQ8 419 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 TMOD2Q9NZR1 351 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 LIMA1Q9UHB6 759 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms