RNA–Protein interactions for RNA: ENST00000525750.1

IRF7-208, Transcript of interferon regulatory factor 7, human

TSL 1 (best)

Gene IRF7, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF7-208	ENST00000525750	UPF2	Q9HAU5	1272 aa	Known RBP	31.11	■■■□□ 2.57
IRF7-208	ENST00000525750	ZNFX1	Q9P2E3	1918 aa	Known RBP	31.11	■■■□□ 2.57
IRF7-208	ENST00000525750	PNMA6F	A0A0J9YX94	578 aa		31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	CCDC85C	A6NKD9	419 aa		31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	CYTH3	O43739	400 aa		31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	RTN1	Q16799	776 aa		31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	ZNF467	Q7Z7K2	595 aa	Predicted RBP	31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	MAML3	Q96JK9	1138 aa		31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	TMEM106C	Q9BVX2	250 aa		31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	UPF3B	Q9BZI7	483 aa	Known RBP	31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	A1CF	Q9NQ94	594 aa	Known RBP	31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	PDRG1	Q9NUG6	133 aa		31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	MRPL11	Q9Y3B7	192 aa	Known RBP	31.1	■■■□□ 2.57
IRF7-208	ENST00000525750	RXRA	P19793	462 aa		31.09	■■■□□ 2.57
IRF7-208	ENST00000525750	APOBR	Q0VD83	1088 aa		31.09	■■■□□ 2.57
IRF7-208	ENST00000525750	MUM1L1	Q5H9M0	696 aa		31.09	■■■□□ 2.57
IRF7-208	ENST00000525750	TMTC3	Q6ZXV5	915 aa		31.09	■■■□□ 2.57
IRF7-208	ENST00000525750	RRP36	Q96EU6	259 aa	Known RBP	31.09	■■■□□ 2.57
IRF7-208	ENST00000525750	GOLGA8A	A7E2F4	631 aa		31.08	■■■□□ 2.57
IRF7-208	ENST00000525750	GOLGA8B	A8MQT2	603 aa		31.08	■■■□□ 2.57
IRF7-208	ENST00000525750	PGK2	P07205	417 aa		31.08	■■■□□ 2.57
IRF7-208	ENST00000525750	CAPN2	P17655	700 aa		31.08	■■■□□ 2.57
IRF7-208	ENST00000525750	CCL14	Q16627	93 aa		31.08	■■■□□ 2.57
IRF7-208	ENST00000525750	USH1G	Q495M9	461 aa		31.08	■■■□□ 2.57
IRF7-208	ENST00000525750	MCF2L2	Q86YR7	1114 aa		31.08	■■■□□ 2.57
IRF7-208	ENST00000525750	CCDC144CP	Q8IYA2	1237 aa		31.08	■■■□□ 2.57
IRF7-208	ENST00000525750	PIGS	Q96S52	555 aa		31.08	■■■□□ 2.57
IRF7-208	ENST00000525750	HTT	P42858	3142 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	NID2	Q14112	1375 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	RPTOR	Q8N122	1335 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	POTEB2	H3BUK9	544 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	IGHA2	P01877	340 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	METAP2	P50579	478 aa	Known RBP eCLIP	31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	ANKRD1	Q15327	319 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	SLC35G1	Q2M3R5	365 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	MAP3K21	Q5TCX8	1036 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	HOMER1	Q86YM7	354 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	SRBD1	Q8N5C6	995 aa	Known RBP	31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	CLEC4D	Q8WXI8	215 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	CYP39A1	Q9NYL5	469 aa		31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	SEC63	Q9UGP8	760 aa	Known RBP	31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	NAP1L2	Q9ULW6	460 aa	Predicted RBP	31.07	■■■□□ 2.56
IRF7-208	ENST00000525750	PLEKHA8P1	O95397	391 aa		31.06	■■■□□ 2.56
IRF7-208	ENST00000525750	TOB2	Q14106	344 aa	Predicted RBP	31.06	■■■□□ 2.56
IRF7-208	ENST00000525750	NSMF	Q6X4W1	530 aa		31.06	■■■□□ 2.56
IRF7-208	ENST00000525750	SAMD3	Q8N6K7	520 aa		31.06	■■■□□ 2.56
IRF7-208	ENST00000525750	HMX1	Q9NP08	348 aa	Predicted RBP	31.06	■■■□□ 2.56
IRF7-208	ENST00000525750	FLRT1	Q9NZU1	646 aa		31.06	■■■□□ 2.56
IRF7-208	ENST00000525750	MYH6	P13533	1939 aa		31.06	■■■□□ 2.56
IRF7-208	ENST00000525750	RAB11FIP4	Q86YS3	637 aa		31.05	■■■□□ 2.56
IRF7-208	ENST00000525750	FAM133A	Q8N9E0	248 aa		31.05	■■■□□ 2.56
IRF7-208	ENST00000525750	ZNF274	Q96GC6	653 aa	Predicted RBP	31.05	■■■□□ 2.56
IRF7-208	ENST00000525750	C22orf23	Q9BZE7	217 aa		31.05	■■■□□ 2.56
IRF7-208	ENST00000525750	MAP3K20	Q9NYL2	800 aa	Known RBP	31.05	■■■□□ 2.56
IRF7-208	ENST00000525750	NRBP1	Q9UHY1	535 aa		31.05	■■■□□ 2.56
IRF7-208	ENST00000525750	PCDHA1	Q9Y5I3	950 aa		31.05	■■■□□ 2.56
IRF7-208	ENST00000525750	LOC102724159	A0A0B4J2E5	919 aa		31.04	■■■□□ 2.56
IRF7-208	ENST00000525750	NFIB	O00712	420 aa		31.04	■■■□□ 2.56
IRF7-208	ENST00000525750	CCL5	P13501	91 aa		31.04	■■■□□ 2.56
IRF7-208	ENST00000525750	PRKAR2A	P13861	404 aa	Known RBP	31.04	■■■□□ 2.56
IRF7-208	ENST00000525750	PWP2	Q15269	919 aa	Known RBP	31.04	■■■□□ 2.56
IRF7-208	ENST00000525750	MAMDC4	Q6UXC1	1216 aa		31.04	■■■□□ 2.56
IRF7-208	ENST00000525750	RNF207	Q6ZRF8	634 aa		31.04	■■■□□ 2.56
IRF7-208	ENST00000525750	TINF2	Q9BSI4	451 aa		31.04	■■■□□ 2.56
IRF7-208	ENST00000525750	RBM25	P49756	843 aa	Known RBP	31.03	■■■□□ 2.56
IRF7-208	ENST00000525750	CACNB2	Q08289	660 aa	Predicted RBP	31.03	■■■□□ 2.56
IRF7-208	ENST00000525750	MTFR1	Q15390	333 aa		31.03	■■■□□ 2.56
IRF7-208	ENST00000525750	IL27	Q8NEV9	243 aa		31.03	■■■□□ 2.56
IRF7-208	ENST00000525750	RNF208	Q9H0X6	261 aa		31.03	■■■□□ 2.56
IRF7-208	ENST00000525750	ADD3	Q9UEY8	706 aa	Known RBP	31.03	■■■□□ 2.56
IRF7-208	ENST00000525750	SMCHD1	A6NHR9	2005 aa		31.03	■■■□□ 2.56
IRF7-208	ENST00000525750	SYNGAP1	Q96PV0	1343 aa		31.02	■■■□□ 2.56
IRF7-208	ENST00000525750	PLXNA1	Q9UIW2	1896 aa		31.02	■■■□□ 2.56
IRF7-208	ENST00000525750	PDIA3	P30101	505 aa	Known RBP	31.02	■■■□□ 2.56
IRF7-208	ENST00000525750	BAAT	Q14032	418 aa	Predicted RBP	31.02	■■■□□ 2.56
IRF7-208	ENST00000525750	BAZ2B	Q9UIF8	2168 aa	Known RBP	31.02	■■■□□ 2.56
IRF7-208	ENST00000525750	PTPDC1	A2A3K4	754 aa		31.01	■■■□□ 2.55
IRF7-208	ENST00000525750	PPP1R11	O60927	126 aa	Predicted RBP	31.01	■■■□□ 2.55
IRF7-208	ENST00000525750	GJB1	P08034	283 aa		31.01	■■■□□ 2.55
IRF7-208	ENST00000525750	PAK6	Q9NQU5	681 aa	Predicted RBP	31.01	■■■□□ 2.55
IRF7-208	ENST00000525750	FAM217B	Q9NTX9	383 aa	Predicted RBP	31.01	■■■□□ 2.55
IRF7-208	ENST00000525750	RBM27	Q9P2N5	1060 aa	Known RBP	31.01	■■■□□ 2.55
IRF7-208	ENST00000525750	ASB14	A6NK59	587 aa		31	■■■□□ 2.55
IRF7-208	ENST00000525750	TAL1	P17542	331 aa	Predicted RBP	31	■■■□□ 2.55
IRF7-208	ENST00000525750	CDC27	P30260	824 aa		31	■■■□□ 2.55
IRF7-208	ENST00000525750	CYP2C19	P33261	490 aa		31	■■■□□ 2.55
IRF7-208	ENST00000525750	RPS6	P62753	249 aa	Known RBP	31	■■■□□ 2.55
IRF7-208	ENST00000525750	GHRHR	Q02643	423 aa		31	■■■□□ 2.55
IRF7-208	ENST00000525750	TRIM32	Q13049	653 aa		31	■■■□□ 2.55
IRF7-208	ENST00000525750	CMTR1	Q8N1G2	835 aa	Known RBP	31	■■■□□ 2.55
IRF7-208	ENST00000525750	MPHOSPH6	Q99547	160 aa	Known RBP	31	■■■□□ 2.55
IRF7-208	ENST00000525750	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	31	■■■□□ 2.55
IRF7-208	ENST00000525750	UNC93B1	Q9H1C4	597 aa		31	■■■□□ 2.55
IRF7-208	ENST00000525750	CCDC82	Q8N4S0	544 aa		30.99	■■■□□ 2.55
IRF7-208	ENST00000525750	DNER	Q8NFT8	737 aa		30.99	■■■□□ 2.55
IRF7-208	ENST00000525750	CNTNAP5	Q8WYK1	1306 aa		30.98	■■■□□ 2.55
IRF7-208	ENST00000525750	ADD1	P35611	737 aa	Known RBP	30.98	■■■□□ 2.55
IRF7-208	ENST00000525750	NEK4	P51957	841 aa		30.98	■■■□□ 2.55
IRF7-208	ENST00000525750	CNTN2	Q02246	1040 aa		30.98	■■■□□ 2.55
IRF7-208	ENST00000525750	FUT2	Q10981	343 aa		30.98	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms