RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 WDR19Q8NEZ3 1342 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 SYNRGQ9UMZ2 1314 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 ASB14A6NK59 587 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 ADAMTS4O75173 837 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 FXR1P51114 621 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 ASPRV1Q53RT3 343 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 SLC39A5Q6ZMH5 540 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 RNF180Q86T96 592 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 SKAP1Q86WV1 359 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 CLEC4DQ8WXI8 215 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 UBA5Q9GZZ9 404 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 NFIBO00712 420 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 SNX17Q15036 470 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 CCDC144BQ3MJ40 725 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 FERMT2Q96AC1 680 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 GDF15Q99988 308 aa13.07□□□□□ -0.32
TRAPPC4-204ENST00000524797 E7EWF7 191 aa13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 ADCY6O43306 1168 aa13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 DUSP11O75319 330 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 PARP1P09874 1014 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 TRDNQ13061 729 aa13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 IFIT1BQ5T764 474 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 STOX1Q6ZVD7 989 aa13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 KLHDC9Q8NEP7 349 aa13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 MAP4K1Q92918 833 aa13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 PURBQ96QR8 312 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 TSEN34Q9BSV6 310 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 UPF3AQ9H1J1 476 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 ATP11BQ9Y2G3 1177 aa13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 RBM8AQ9Y5S9 174 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-204ENST00000524797 BMP8BP34820 402 aa13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 MAGEA10P43363 369 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 CDC37Q16543 378 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 SLC30A10Q6XR72 485 aa13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 ADGRF4Q8IZF3 695 aa13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 MORC4Q8TE76 937 aa13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 ESYT1Q9BSJ8 1104 aa13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 A0A1W2PPC1 479 aa13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 MYADML2A6NDP7 307 aa13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 TRIM60Q495X7 471 aa13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 NCOA7Q8NI08 942 aa13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 LSG1Q9H089 658 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-204ENST00000524797 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 A0A1W2PQ45 241 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 A0A1W2PQY0 241 aa13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 PTPDC1A2A3K4 754 aa13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 CST5P28325 142 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 ALDH5A1P51649 535 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 ACLYP53396 1101 aa13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 GJA9P57773 515 aa13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 C1orf53Q5VUE5 145 aa13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 CCSAPQ6IQ19 270 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 RNF207Q6ZRF8 634 aa13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 KIAA1211Q6ZU35 1233 aa13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 RALYLQ86SE5 291 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 ADD3Q9UEY8 706 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 ABCB11O95342 1321 aa13.04□□□□□ -0.32
TRAPPC4-204ENST00000524797 LOC102724159A0A0B4J2E5 919 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 IFIT3O14879 490 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 CALML3P27482 149 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 IRX5P78411 483 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 TNFAIP2Q03169 654 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 GRM4Q14833 912 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 PWP2Q15269 919 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 KCNA10Q16322 511 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 QRICH1Q2TAL8 776 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 USH1GQ495M9 461 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 TAPT1Q6NXT6 567 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 FBXO16Q8IX29 292 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 MB21D2Q8IYB1 491 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 JMJD4Q9H9V9 463 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 SENP2Q9HC62 589 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 VTA1Q9NP79 307 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 KIAA1217Q5T5P2 1943 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 MOXD2PA6NHM9 499 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 C6orf222P0C671 652 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 ANTXR2P58335 489 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 NKX3-2P78367 333 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 WTAPQ15007 396 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 RGS22Q8NE09 1264 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 SPC25Q9HBM1 224 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 VAT1LQ9HCJ6 419 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 PDGFCQ9NRA1 345 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 MAD2L2Q9UI95 211 aa13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 BAZ2BQ9UIF8 2168 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-204ENST00000524797 PALM3A6NDB9 673 aaPredicted RBP13.02□□□□□ -0.32
TRAPPC4-204ENST00000524797 CTAGE5O15320 804 aa13.02□□□□□ -0.32
TRAPPC4-204ENST00000524797 DHX16O60231 1041 aaKnown RBP13.02□□□□□ -0.32
TRAPPC4-204ENST00000524797 RPS6P62753 249 aaKnown RBP13.02□□□□□ -0.32
TRAPPC4-204ENST00000524797 MDM2Q00987 491 aaPredicted RBP13.02□□□□□ -0.32
TRAPPC4-204ENST00000524797 EEPD1Q7L9B9 569 aa13.02□□□□□ -0.32
TRAPPC4-204ENST00000524797 CHST3Q7LGC8 479 aa13.02□□□□□ -0.32
TRAPPC4-204ENST00000524797 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.32
TRAPPC4-204ENST00000524797 ERICH2A1L162 156 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms