RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PLS1Q14651 629 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 SEPT2Q15019 361 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 ABCB5Q2M3G0 1257 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 LEXMQ3ZCV2 418 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 SIAH1Q8IUQ4 282 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 MB21D1Q8N884 522 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 SCLYQ96I15 445 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 TRIM34Q9BYJ4 488 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 TRPV6Q9H1D0 765 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 ALG13Q9NP73 1137 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 COPRSQ9NQ92 184 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 ADAMTS5Q9UNA0 930 aa10.91□□□□□ -0.66
TRAPPC9-212ENST00000521944 DCXO43602 365 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 C6orf222P0C671 652 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 ARID4AP29374 1257 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 GJA9P57773 515 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 DYNLL1P63167 89 aaKnown RBP10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 TFCP2Q12800 502 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 CSPP1Q1MSJ5 1256 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 CERKLQ49MI3 558 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 NYAP1Q6ZVC0 841 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 WDR63Q8IWG1 891 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 VTI1AQ96AJ9 217 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 MMP19Q99542 508 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 TANGO6Q9C0B7 1094 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 UBE2ZQ9H832 354 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 FAM184BQ9ULE4 1060 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 MYO7AQ13402 2215 aa10.9□□□□□ -0.66
TRAPPC9-212ENST00000521944 NCOR2Q9Y618 2525 aa10.9□□□□□ -0.67
TRAPPC9-212ENST00000521944 TET1Q8NFU7 2136 aa10.9□□□□□ -0.67
TRAPPC9-212ENST00000521944 ZBBXA8MT70 800 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 C3orf80F5H4A9 247 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 RBAK-RBAKDNI3L0D1 243 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 BAG3O95817 575 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 PTGS1P23219 599 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 SSTR3P32745 418 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 PLCD1P51178 756 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 NKX3-2P78367 333 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 MVPQ14764 893 aaKnown RBP10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 GNASQ5JWF2 1037 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 NAA16Q6N069 864 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 MAMDC4Q6UXC1 1216 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 PCSK9Q8NBP7 692 aaKnown RBP10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 EHD4Q9H223 541 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 LRP2BPQ9P2M1 347 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 SERPINB13Q9UIV8 391 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 CNPY2Q9Y2B0 182 aa10.89□□□□□ -0.67
TRAPPC9-212ENST00000521944 ASTN1O14525 1302 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 LCHNA4D1U4 455 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 TLR3O15455 904 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 B4GALT4O60513 344 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 SLC25A27O95847 323 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 HLA-DOAP06340 250 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 KCNA5P22460 613 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 BEX3Q00994 111 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 TCF15Q12870 199 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 CXCL17Q6UXB2 119 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 RIOX2Q8IUF8 465 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 REPS2Q8NFH8 660 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 FGD4Q96M96 766 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 SNRKQ9NRH2 765 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 TSR3Q9UJK0 312 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 SALL2Q9Y467 1007 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 DNAH14Q0VDD8 3507 aa10.88□□□□□ -0.67
TRAPPC9-212ENST00000521944 SCN5AQ14524 2016 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 MCM3APO60318 1980 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 COL11A1P12107 1806 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 DNAJC25-GNG10A0A024R161 153 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 FLOT1O75955 427 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 FECHP22830 423 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 PTPN5P54829 565 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 GABPAQ06546 454 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 ACVR2BQ13705 512 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 CCDC144BQ3MJ40 725 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 PTCRAQ6ISU1 281 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 METTL3Q86U44 580 aaKnown RBP10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 RPUSD2Q8IZ73 545 aaKnown RBP10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 SPICE1Q8N0Z3 855 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 MSL3Q8N5Y2 521 aaKnown RBP10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 GDPD5Q8WTR4 605 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 NEUROD6Q96NK8 337 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 KATNBL1Q9H079 304 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 SUGCTQ9HAC7 445 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 FBXO28Q9NVF7 368 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 LMCD1Q9NZU5 365 aa10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 ZHX1Q9UKY1 873 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 ZNF214Q9UL59 606 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 MYO5AQ9Y4I1 1855 aaKnown RBP10.87□□□□□ -0.67
TRAPPC9-212ENST00000521944 KMT2BQ9UMN6 2715 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 ZFHX4Q86UP3 3567 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 MYH1P12882 1939 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 COL4A4P53420 1690 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 RCCD1A6NED2 376 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 CYP2E1P05181 493 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 STAT3P40763 770 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 ZP2Q05996 745 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 ITGA7Q13683 1181 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 KCTD2Q14681 263 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 ATF7IPQ6VMQ6 1270 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms