RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 C1orf53Q5VUE5 145 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 NSMFQ6X4W1 530 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 CYB5R4Q7L1T6 521 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 CENPQQ7L2Z9 268 aaPredicted RBP19.97■□□□□ 0.79
SQLE-205ENST00000521232 KLHDC9Q8NEP7 349 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 MAP4K1Q92918 833 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 LENG1Q96BZ8 264 aaPredicted RBP19.97■□□□□ 0.79
SQLE-205ENST00000521232 TSEN34Q9BSV6 310 aaKnown RBP19.97■□□□□ 0.79
SQLE-205ENST00000521232 UBA5Q9GZZ9 404 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 ASTN1O14525 1302 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 WDR19Q8NEZ3 1342 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 RTP1P59025 263 aa19.96■□□□□ 0.79
SQLE-205ENST00000521232 CLEC4DQ8WXI8 215 aa19.96■□□□□ 0.79
SQLE-205ENST00000521232 FERMT2Q96AC1 680 aa19.96■□□□□ 0.79
SQLE-205ENST00000521232 SYNRGQ9UMZ2 1314 aa19.96■□□□□ 0.79
SQLE-205ENST00000521232 NFIBO00712 420 aa19.95■□□□□ 0.78
SQLE-205ENST00000521232 ADCY6O43306 1168 aa19.95■□□□□ 0.78
SQLE-205ENST00000521232 MAGEA10P43363 369 aaPredicted RBP19.95■□□□□ 0.78
SQLE-205ENST00000521232 BAATQ14032 418 aaPredicted RBP19.95■□□□□ 0.78
SQLE-205ENST00000521232 ASPRV1Q53RT3 343 aa19.95■□□□□ 0.78
SQLE-205ENST00000521232 IFIT1BQ5T764 474 aaKnown RBP19.95■□□□□ 0.78
SQLE-205ENST00000521232 CCSAPQ6IQ19 270 aaPredicted RBP19.95■□□□□ 0.78
SQLE-205ENST00000521232 MORC4Q8TE76 937 aa19.95■□□□□ 0.78
SQLE-205ENST00000521232 CPVLQ9H3G5 476 aa19.95■□□□□ 0.78
SQLE-205ENST00000521232 LCTP09848 1927 aa19.95■□□□□ 0.78
SQLE-205ENST00000521232 E7EWF7 191 aa19.94■□□□□ 0.78
SQLE-205ENST00000521232 PARP1P09874 1014 aaKnown RBP19.94■□□□□ 0.78
SQLE-205ENST00000521232 GJA9P57773 515 aa19.94■□□□□ 0.78
SQLE-205ENST00000521232 ADGRF4Q8IZF3 695 aa19.94■□□□□ 0.78
SQLE-205ENST00000521232 PURBQ96QR8 312 aaKnown RBP19.94■□□□□ 0.78
SQLE-205ENST00000521232 UPF3AQ9H1J1 476 aaKnown RBP19.94■□□□□ 0.78
SQLE-205ENST00000521232 ADD3Q9UEY8 706 aaKnown RBP19.94■□□□□ 0.78
SQLE-205ENST00000521232 ATP11BQ9Y2G3 1177 aa19.94■□□□□ 0.78
SQLE-205ENST00000521232 LOC102724159A0A0B4J2E5 919 aa19.93■□□□□ 0.78
SQLE-205ENST00000521232 MOXD2PA6NHM9 499 aa19.93■□□□□ 0.78
SQLE-205ENST00000521232 CST5P28325 142 aaPredicted RBP19.93■□□□□ 0.78
SQLE-205ENST00000521232 ACLYP53396 1101 aa19.93■□□□□ 0.78
SQLE-205ENST00000521232 NKX3-2P78367 333 aa19.93■□□□□ 0.78
SQLE-205ENST00000521232 PWP2Q15269 919 aaKnown RBP19.93■□□□□ 0.78
SQLE-205ENST00000521232 KCNA10Q16322 511 aa19.93■□□□□ 0.78
SQLE-205ENST00000521232 RNF207Q6ZRF8 634 aa19.93■□□□□ 0.78
SQLE-205ENST00000521232 RGS22Q8NE09 1264 aa19.93■□□□□ 0.78
SQLE-205ENST00000521232 TAF6LQ9Y6J9 622 aa19.93■□□□□ 0.78
SQLE-205ENST00000521232 A0A1W2PQ45 241 aaPredicted RBP19.92■□□□□ 0.78
SQLE-205ENST00000521232 A0A1W2PQY0 241 aa19.92■□□□□ 0.78
SQLE-205ENST00000521232 PTPDC1A2A3K4 754 aa19.92■□□□□ 0.78
SQLE-205ENST00000521232 TNFAIP2Q03169 654 aa19.92■□□□□ 0.78
SQLE-205ENST00000521232 CDC37Q16543 378 aaPredicted RBP19.92■□□□□ 0.78
SQLE-205ENST00000521232 TRIM60Q495X7 471 aa19.92■□□□□ 0.78
SQLE-205ENST00000521232 TAPT1Q6NXT6 567 aa19.92■□□□□ 0.78
SQLE-205ENST00000521232 NCOA7Q8NI08 942 aa19.92■□□□□ 0.78
SQLE-205ENST00000521232 MAF1Q9H063 256 aa19.92■□□□□ 0.78
SQLE-205ENST00000521232 SPC25Q9HBM1 224 aa19.92■□□□□ 0.78
SQLE-205ENST00000521232 RBM8AQ9Y5S9 174 aaKnown RBP19.92■□□□□ 0.78
SQLE-205ENST00000521232 DDX49Q9Y6V7 483 aaKnown RBP19.92■□□□□ 0.78
SQLE-205ENST00000521232 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.91■□□□□ 0.78
SQLE-205ENST00000521232 MYADML2A6NDP7 307 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 C6orf222P0C671 652 aaPredicted RBP19.91■□□□□ 0.78
SQLE-205ENST00000521232 ALDH5A1P51649 535 aaPredicted RBP19.91■□□□□ 0.78
SQLE-205ENST00000521232 RPS6P62753 249 aaKnown RBP19.91■□□□□ 0.78
SQLE-205ENST00000521232 BMP2KLQ5H9B9 411 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 IQSEC1Q6DN90 963 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 STOX1Q6ZVD7 989 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 STAG2Q8N3U4 1231 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 PCSK9Q8NBP7 692 aaKnown RBP19.91■□□□□ 0.78
SQLE-205ENST00000521232 NUP133Q8WUM0 1156 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 ESYT1Q9BSJ8 1104 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 LSG1Q9H089 658 aaKnown RBP19.91■□□□□ 0.78
SQLE-205ENST00000521232 JMJD4Q9H9V9 463 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 VTA1Q9NP79 307 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 PRKAG2Q9UGJ0 569 aa19.91■□□□□ 0.78
SQLE-205ENST00000521232 GNEQ9Y223 722 aaKnown RBP19.91■□□□□ 0.78
SQLE-205ENST00000521232 MYH6P13533 1939 aa19.9■□□□□ 0.78
SQLE-205ENST00000521232 IFIT3O14879 490 aaKnown RBP19.9■□□□□ 0.78
SQLE-205ENST00000521232 CTAGE5O15320 804 aa19.9■□□□□ 0.78
SQLE-205ENST00000521232 CALML3P27482 149 aa19.9■□□□□ 0.78
SQLE-205ENST00000521232 IRX5P78411 483 aaPredicted RBP19.9■□□□□ 0.78
SQLE-205ENST00000521232 MDM2Q00987 491 aaPredicted RBP19.9■□□□□ 0.78
SQLE-205ENST00000521232 TLE2Q04725 743 aa19.9■□□□□ 0.78
SQLE-205ENST00000521232 USH1GQ495M9 461 aa19.9■□□□□ 0.78
SQLE-205ENST00000521232 SLC30A10Q6XR72 485 aa19.9■□□□□ 0.78
SQLE-205ENST00000521232 RALYLQ86SE5 291 aaKnown RBP19.9■□□□□ 0.78
SQLE-205ENST00000521232 UBE2OQ9C0C9 1292 aaKnown RBP19.9■□□□□ 0.78
SQLE-205ENST00000521232 PDGFCQ9NRA1 345 aa19.9■□□□□ 0.78
SQLE-205ENST00000521232 PCDH10Q9P2E7 1040 aa19.9■□□□□ 0.78
SQLE-205ENST00000521232 MAD2L2Q9UI95 211 aa19.9■□□□□ 0.78
SQLE-205ENST00000521232 ERICH2A1L162 156 aa19.89■□□□□ 0.77
SQLE-205ENST00000521232 PALM3A6NDB9 673 aaPredicted RBP19.89■□□□□ 0.77
SQLE-205ENST00000521232 KLRF2D3W0D1 207 aa19.89■□□□□ 0.77
SQLE-205ENST00000521232 ELP1O95163 1332 aa19.89■□□□□ 0.77
SQLE-205ENST00000521232 ABCB11O95342 1321 aa19.89■□□□□ 0.77
SQLE-205ENST00000521232 ASGR1P07306 291 aa19.89■□□□□ 0.77
SQLE-205ENST00000521232 LAMA2P24043 3122 aaKnown RBP19.89■□□□□ 0.77
SQLE-205ENST00000521232 QRICH1Q2TAL8 776 aa19.89■□□□□ 0.77
SQLE-205ENST00000521232 GNASQ5JWF2 1037 aa19.89■□□□□ 0.77
SQLE-205ENST00000521232 EEPD1Q7L9B9 569 aa19.89■□□□□ 0.77
SQLE-205ENST00000521232 SKAP1Q86WV1 359 aa19.89■□□□□ 0.77
SQLE-205ENST00000521232 DNERQ8NFT8 737 aa19.89■□□□□ 0.77
SQLE-205ENST00000521232 VAT1LQ9HCJ6 419 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms