RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 SNX17Q15036 470 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 USH1GQ495M9 461 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 GNASQ5JWF2 1037 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 SH3RF1Q7Z6J0 888 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 FBXO16Q8IX29 292 aaPredicted RBP18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 DEFB123Q8N688 67 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 PCSK9Q8NBP7 692 aaKnown RBP18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 TTC14Q96N46 770 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 TSEN34Q9BSV6 310 aaKnown RBP18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 AP5M1Q9H0R1 490 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 TMEM39AQ9NV64 488 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 CYP39A1Q9NYL5 469 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 DCDC2CA8MYV0 355 aa18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 ASGR1P07306 291 aa18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 BEX3Q00994 111 aa18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 ZNF543Q08ER8 600 aa18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 BAATQ14032 418 aaPredicted RBP18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 LRIT3Q3SXY7 679 aa18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 CCDC178Q5BJE1 867 aa18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 Q7L0L9 218 aa18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 PURBQ96QR8 312 aaKnown RBP18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 UBAC1Q9BSL1 405 aa18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 DSCC1Q9BVC3 393 aa18.93■□□□□ 0.62
IGHV3-42-201ENST00000520410 NFIBO00712 420 aa18.92■□□□□ 0.62
IGHV3-42-201ENST00000520410 ADCY6O43306 1168 aa18.92■□□□□ 0.62
IGHV3-42-201ENST00000520410 NOVP48745 357 aa18.92■□□□□ 0.62
IGHV3-42-201ENST00000520410 TTC22Q5TAA0 569 aa18.92■□□□□ 0.62
IGHV3-42-201ENST00000520410 TLK2Q86UE8 772 aa18.92■□□□□ 0.62
IGHV3-42-201ENST00000520410 PNMA1Q8ND90 353 aa18.92■□□□□ 0.62
IGHV3-42-201ENST00000520410 KRT23Q9C075 422 aa18.92■□□□□ 0.62
IGHV3-42-201ENST00000520410 ADD3Q9UEY8 706 aaKnown RBP18.92■□□□□ 0.62
IGHV3-42-201ENST00000520410 TRIM43BA6NCK2 446 aa18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 PDE4AP27815 886 aa18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 GPATCH4Q5T3I0 446 aaKnown RBP18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 C1orf53Q5VUE5 145 aa18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 BTNL9Q6UXG8 535 aa18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 RNF207Q6ZRF8 634 aa18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 KIAA1211Q6ZU35 1233 aa18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 TRIM43Q96BQ3 446 aaPredicted RBP18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 ZSCAN10Q96SZ4 725 aaPredicted RBP18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 MPHOSPH6Q99547 160 aaKnown RBP18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 UBA5Q9GZZ9 404 aa18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 CPVLQ9H3G5 476 aa18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 TNKSO95271 1327 aa18.91■□□□□ 0.62
IGHV3-42-201ENST00000520410 LAMA4Q16363 1823 aa18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 SMCHD1A6NHR9 2005 aa18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 A0A0U1RQG5 324 aaPredicted RBP18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 DYNC1LI2O43237 492 aaPredicted RBP18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 GJA9P57773 515 aa18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 SLC30A10Q6XR72 485 aa18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 DGKHQ86XP1 1220 aa18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 KLHDC9Q8NEP7 349 aa18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 RUFY2Q8WXA3 655 aa18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 CNNM2Q9H8M5 875 aa18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 PNMA2Q9UL42 364 aa18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 LTBP2Q14767 1821 aa18.9■□□□□ 0.62
IGHV3-42-201ENST00000520410 TLR3O15455 904 aaKnown RBP18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 ZEB2O60315 1214 aa18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 GSPT1P15170 499 aaKnown RBP18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 ALDH5A1P51649 535 aaPredicted RBP18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 PDE4DQ08499 809 aa18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 TRDNQ13061 729 aa18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 SHHQ15465 462 aa18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 FAM161BQ96MY7 647 aa18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 VAT1LQ9HCJ6 419 aa18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 PDGFCQ9NRA1 345 aa18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 MCM3APO60318 1980 aa18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 MROH7Q68CQ1 1323 aa18.89■□□□□ 0.61
IGHV3-42-201ENST00000520410 CST5P28325 142 aaPredicted RBP18.88■□□□□ 0.61
IGHV3-42-201ENST00000520410 FPGSQ05932 587 aa18.88■□□□□ 0.61
IGHV3-42-201ENST00000520410 CDC37Q16543 378 aaPredicted RBP18.88■□□□□ 0.61
IGHV3-42-201ENST00000520410 C9orf50Q5SZB4 431 aa18.88■□□□□ 0.61
IGHV3-42-201ENST00000520410 IFIT1BQ5T764 474 aaKnown RBP18.88■□□□□ 0.61
IGHV3-42-201ENST00000520410 KATNBL1Q9H079 304 aa18.88■□□□□ 0.61
IGHV3-42-201ENST00000520410 UPF3AQ9H1J1 476 aaKnown RBP18.88■□□□□ 0.61
IGHV3-42-201ENST00000520410 VTA1Q9NP79 307 aa18.88■□□□□ 0.61
IGHV3-42-201ENST00000520410 LRRC37A2A6NM11 1700 aa18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 ASTN1O14525 1302 aa18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 ELP1O95163 1332 aa18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 PARP1P09874 1014 aaKnown RBP18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 SMPD1P17405 629 aa18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 PTGS1P23219 599 aa18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 FSCN1Q16658 493 aaKnown RBP18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 ASPRV1Q53RT3 343 aa18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 CXCL17Q6UXB2 119 aa18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 ENAHQ8N8S7 591 aaPredicted RBP18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 RAD50Q92878 1312 aa18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 RNPC3Q96LT9 517 aaKnown RBP18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 PPP1R12CQ9BZL4 782 aa18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 ZSWIM5Q9P217 1185 aa18.87■□□□□ 0.61
IGHV3-42-201ENST00000520410 SNHG28P0DPA3 235 aa18.86■□□□□ 0.61
IGHV3-42-201ENST00000520410 NT5C2P49902 561 aa18.86■□□□□ 0.61
IGHV3-42-201ENST00000520410 FAAP100Q0VG06 881 aa18.86■□□□□ 0.61
IGHV3-42-201ENST00000520410 ZNF697Q5TEC3 545 aa18.86■□□□□ 0.61
IGHV3-42-201ENST00000520410 IQSEC1Q6DN90 963 aa18.86■□□□□ 0.61
IGHV3-42-201ENST00000520410 CCSAPQ6IQ19 270 aaPredicted RBP18.86■□□□□ 0.61
IGHV3-42-201ENST00000520410 RALYLQ86SE5 291 aaKnown RBP18.86■□□□□ 0.61
IGHV3-42-201ENST00000520410 IL25Q9H293 177 aa18.86■□□□□ 0.61
IGHV3-42-201ENST00000520410 WDR19Q8NEZ3 1342 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms