RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
VEGFA-221ENST00000520265 STAG2Q8N3U4 1231 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 MSL3Q8N5Y2 521 aaKnown RBP16.51■□□□□ 0.23
VEGFA-221ENST00000520265 PIBF1Q8WXW3 757 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 SENP2Q9HC62 589 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 XPNPEP3Q9NQH7 507 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 CYP39A1Q9NYL5 469 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 ASB14A6NK59 587 aa16.5■□□□□ 0.23
VEGFA-221ENST00000520265 H0YGN5 161 aa16.5■□□□□ 0.23
VEGFA-221ENST00000520265 PGK1P00558 417 aa16.5■□□□□ 0.23
VEGFA-221ENST00000520265 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
VEGFA-221ENST00000520265 ACVR2BQ13705 512 aa16.5■□□□□ 0.23
VEGFA-221ENST00000520265 SLC30A10Q6XR72 485 aa16.5■□□□□ 0.23
VEGFA-221ENST00000520265 ZNF467Q7Z7K2 595 aaPredicted RBP16.5■□□□□ 0.23
VEGFA-221ENST00000520265 PURBQ96QR8 312 aaKnown RBP16.5■□□□□ 0.23
VEGFA-221ENST00000520265 MYL10Q9BUA6 226 aa16.5■□□□□ 0.23
VEGFA-221ENST00000520265 LRRC2Q9BYS8 371 aa16.5■□□□□ 0.23
VEGFA-221ENST00000520265 NRBP1Q9UHY1 535 aa16.5■□□□□ 0.23
VEGFA-221ENST00000520265 FAM184BQ9ULE4 1060 aa16.5■□□□□ 0.23
VEGFA-221ENST00000520265 DDX49Q9Y6V7 483 aaKnown RBP16.5■□□□□ 0.23
VEGFA-221ENST00000520265 WDR19Q8NEZ3 1342 aa16.49■□□□□ 0.23
VEGFA-221ENST00000520265 SOWAHBA6NEL2 793 aa16.49■□□□□ 0.23
VEGFA-221ENST00000520265 DNM1LO00429 736 aa16.49■□□□□ 0.23
VEGFA-221ENST00000520265 SNAI1O95863 264 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-221ENST00000520265 ANTXR2P58335 489 aa16.49■□□□□ 0.23
VEGFA-221ENST00000520265 QRICH1Q2TAL8 776 aa16.49■□□□□ 0.23
VEGFA-221ENST00000520265 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.49■□□□□ 0.235e-7■□□□□ 8.4
VEGFA-221ENST00000520265 RNF180Q86T96 592 aa16.49■□□□□ 0.23
VEGFA-221ENST00000520265 FBXO11Q86XK2 927 aa16.49■□□□□ 0.23
VEGFA-221ENST00000520265 RAB11FIP4Q86YS3 637 aa16.49■□□□□ 0.23
VEGFA-221ENST00000520265 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
VEGFA-221ENST00000520265 CTCFLQ8NI51 663 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-221ENST00000520265 GPHNQ9NQX3 736 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-221ENST00000520265 ADD3Q9UEY8 706 aaKnown RBP16.49■□□□□ 0.23
VEGFA-221ENST00000520265 NAP1L2Q9ULW6 460 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-221ENST00000520265 ABCB11O95342 1321 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 MCM3APO60318 1980 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 IGHA2P01877 340 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 ZNF865P0CJ78 1059 aaPredicted RBP16.48■□□□□ 0.23
VEGFA-221ENST00000520265 MNX1P50219 401 aaPredicted RBP16.48■□□□□ 0.23
VEGFA-221ENST00000520265 FGD1P98174 961 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 GRM4Q14833 912 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 MAMDC4Q6UXC1 1216 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 FERMT2Q96AC1 680 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 FGD4Q96M96 766 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 MPHOSPH6Q99547 160 aaKnown RBP16.48■□□□□ 0.23
VEGFA-221ENST00000520265 ABHD16BQ9H3Z7 469 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 JMJD4Q9H9V9 463 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 LY9Q9HBG7 655 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 SPC25Q9HBM1 224 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 MAD2L2Q9UI95 211 aa16.48■□□□□ 0.23
VEGFA-221ENST00000520265 ZMYND8Q9ULU4 1186 aaPredicted RBP16.48■□□□□ 0.23
VEGFA-221ENST00000520265 MYH6P13533 1939 aa16.47■□□□□ 0.23
VEGFA-221ENST00000520265 RXRAP19793 462 aa16.47■□□□□ 0.23
VEGFA-221ENST00000520265 RPS6P62753 249 aaKnown RBP16.47■□□□□ 0.23
VEGFA-221ENST00000520265 LRRC41Q15345 812 aa16.47■□□□□ 0.23
VEGFA-221ENST00000520265 CCDC144BQ3MJ40 725 aa16.47■□□□□ 0.23
VEGFA-221ENST00000520265 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
VEGFA-221ENST00000520265 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
VEGFA-221ENST00000520265 FBXO16Q8IX29 292 aaPredicted RBP16.47■□□□□ 0.23
VEGFA-221ENST00000520265 CLEC4DQ8WXI8 215 aa16.47■□□□□ 0.23
VEGFA-221ENST00000520265 TMEM87BQ96K49 555 aa16.47■□□□□ 0.23
VEGFA-221ENST00000520265 TCEANC2Q96MN5 208 aa16.47■□□□□ 0.23
VEGFA-221ENST00000520265 NEK1Q96PY6 1258 aa16.47■□□□□ 0.23
VEGFA-221ENST00000520265 MRPL11Q9Y3B7 192 aaKnown RBP16.47■□□□□ 0.23
VEGFA-221ENST00000520265 SMCHD1A6NHR9 2005 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 SH2B2O14492 632 aaPredicted RBP16.46■□□□□ 0.23
VEGFA-221ENST00000520265 DDAH1O94760 285 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 REC8O95072 547 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 C6orf222P0C671 652 aaPredicted RBP16.46■□□□□ 0.23
VEGFA-221ENST00000520265 SYN1P17600 705 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 KIF5BP33176 963 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 ADCYAP1R1P41586 468 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 ALDH5A1P51649 535 aaPredicted RBP16.46■□□□□ 0.23
VEGFA-221ENST00000520265 PDE4DQ08499 809 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 IGDCC4Q8TDY8 1250 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 AMNQ9BXJ7 453 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 ATP11BQ9Y2G3 1177 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
VEGFA-221ENST00000520265 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 PALM3A6NDB9 673 aaPredicted RBP16.45■□□□□ 0.22
VEGFA-221ENST00000520265 ZBTB5O15062 677 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 CFBP00751 764 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 KRT32Q14532 448 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 LRRC26Q2I0M4 334 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 CHRDL2Q6WN34 429 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 MICU3Q86XE3 530 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 MCF2L2Q86YR7 1114 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 TMTC2Q8N394 836 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 VTI1AQ96AJ9 217 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 PIGSQ96S52 555 aa16.45■□□□□ 0.22
VEGFA-221ENST00000520265 B4DLN1 442 aa16.44■□□□□ 0.22
VEGFA-221ENST00000520265 COL6A1P12109 1028 aa16.44■□□□□ 0.22
VEGFA-221ENST00000520265 MRPL12P52815 198 aaKnown RBP16.44■□□□□ 0.22
VEGFA-221ENST00000520265 TNFAIP2Q03169 654 aa16.44■□□□□ 0.22
VEGFA-221ENST00000520265 TROAPQ12815 778 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms