RNA–Protein interactions for RNA: ENST00000519788.6

SCUBE2-206, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5

Gene SCUBE2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-206ENST00000519788 IGDCC4Q8TDY8 1250 aa9.26□□□□□ -0.93
SCUBE2-206ENST00000519788 MMP19Q99542 508 aa9.26□□□□□ -0.93
SCUBE2-206ENST00000519788 RNF208Q9H0X6 261 aa9.26□□□□□ -0.93
SCUBE2-206ENST00000519788 HOMER2Q9NSB8 354 aa9.26□□□□□ -0.93
SCUBE2-206ENST00000519788 RBBP6Q7Z6E9 1792 aaKnown RBP9.26□□□□□ -0.93
SCUBE2-206ENST00000519788 BRCA2P51587 3418 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 ERICH2A1L162 156 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 HOXC6P09630 235 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 PARP1P09874 1014 aaKnown RBP9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 ALAS1P13196 640 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 MCM5P33992 734 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 COPB2P35606 906 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 RGS19P49795 217 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 CACNB2Q08289 660 aaPredicted RBP9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 SART3Q15020 963 aaKnown RBP9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 AMHR2Q16671 573 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 ADCK5Q3MIX3 580 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 GPATCH4Q5T3I0 446 aaKnown RBP9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 PARP9Q8IXQ6 854 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 TRMT44Q8IYL2 757 aaKnown RBP9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 STAG2Q8N3U4 1231 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 LRRC2Q9BYS8 371 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 RANBP17Q9H2T7 1088 aaKnown RBP9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 LY9Q9HBG7 655 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 CCPG1Q9ULG6 757 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 SMCHD1A6NHR9 2005 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 PLXNA1Q9UIW2 1896 aa9.25□□□□□ -0.93
SCUBE2-206ENST00000519788 KIAA0100Q14667 2235 aaKnown RBP9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 KLRF2D3W0D1 207 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 REC8O95072 547 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 ICAM1P05362 532 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 CYP2C19P33261 490 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 HSPA4P34932 840 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 ZNF792Q3KQV3 632 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 TSGA10IPQ3SY00 556 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 ASPRV1Q53RT3 343 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 MUM1L1Q5H9M0 696 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 MAP3K21Q5TCX8 1036 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 ADGRF4Q8IZF3 695 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 ANKRD35Q8N283 1001 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 CHST13Q8NET6 341 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 KCNB2Q92953 911 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 DDX11Q96FC9 970 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 MAML3Q96JK9 1138 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 DEFB118Q96PH6 123 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 TRERF1Q96PN7 1200 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 NEK1Q96PY6 1258 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 VAT1LQ9HCJ6 419 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 HMX1Q9NP08 348 aaPredicted RBP9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 RNF146Q9NTX7 359 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 MAD2L2Q9UI95 211 aa9.24□□□□□ -0.93
SCUBE2-206ENST00000519788 DNAJC25-GNG10A0A024R161 153 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 PALM3A6NDB9 673 aaPredicted RBP9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 SH2B2O14492 632 aaPredicted RBP9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 GALR2O43603 387 aaPredicted RBP9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 DHX16O60231 1041 aaKnown RBP9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 IGHA2P01877 340 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 GJB1P08034 283 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 CPA1P15085 419 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 CCND3P30281 292 aaPredicted RBP9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 EXOSC10Q01780 885 aaKnown RBP9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 TROAPQ12815 778 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 GRM4Q14833 912 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 SLC35G1Q2M3R5 365 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 TKFCQ3LXA3 575 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 MFSD14CQ5VZR4 134 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 OLFML2BQ68BL8 750 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 NFXL1Q6ZNB6 911 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 CATIPQ7Z7H3 387 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 TRPV1Q8NER1 839 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 TMEM87BQ96K49 555 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 TCEANC2Q96MN5 208 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 MYL10Q9BUA6 226 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 TMEM121BQ9BXQ6 578 aaPredicted RBP9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 ACAD9Q9H845 621 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 JMJD4Q9H9V9 463 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 PAK6Q9NQU5 681 aaPredicted RBP9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 SLC5A4Q9NY91 659 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 FBXO40Q9UH90 709 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 SNX14Q9Y5W7 946 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 RPTORQ8N122 1335 aa9.23□□□□□ -0.93
SCUBE2-206ENST00000519788 SGPL1O95470 568 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 TFRCP02786 760 aaKnown RBP9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 FECHP22830 423 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 GJA8P48165 433 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 CNTN2Q02246 1040 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 MLLT1Q03111 559 aaPredicted RBP9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 KRT32Q14532 448 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 CDC37Q16543 378 aaPredicted RBP9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 USH1GQ495M9 461 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 PRAMEF19Q5SWL8 479 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 DHX32Q7L7V1 743 aaKnown RBP9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 RAB11FIP4Q86YS3 637 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 ZNF654Q8IZM8 581 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 U2AF1L4Q8WU68 220 aaKnown RBP9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 NUP133Q8WUM0 1156 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 CLEC4DQ8WXI8 215 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 SHISA4Q96DD7 197 aa9.22□□□□□ -0.93
SCUBE2-206ENST00000519788 JAKMIP1Q96N16 626 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms