RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 UBA5Q9GZZ9 404 aa12.39□□□□□ -0.43
SPIDR-205ENST00000518060 CPVLQ9H3G5 476 aa12.39□□□□□ -0.43
SPIDR-205ENST00000518060 CYP39A1Q9NYL5 469 aa12.39□□□□□ -0.43
SPIDR-205ENST00000518060 DDX49Q9Y6V7 483 aaKnown RBP12.39□□□□□ -0.43
SPIDR-205ENST00000518060 PLXNA1Q9UIW2 1896 aa12.38□□□□□ -0.43
SPIDR-205ENST00000518060 NFIBO00712 420 aa12.38□□□□□ -0.43
SPIDR-205ENST00000518060 DUSP11O75319 330 aaKnown RBP12.38□□□□□ -0.43
SPIDR-205ENST00000518060 CHMLP26374 656 aa12.38□□□□□ -0.43
SPIDR-205ENST00000518060 NT5C2P49902 561 aa12.38□□□□□ -0.43
SPIDR-205ENST00000518060 ACLYP53396 1101 aa12.38□□□□□ -0.43
SPIDR-205ENST00000518060 BAATQ14032 418 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-205ENST00000518060 GPATCH4Q5T3I0 446 aaKnown RBP12.38□□□□□ -0.43
SPIDR-205ENST00000518060 IFIT1BQ5T764 474 aaKnown RBP12.38□□□□□ -0.43
SPIDR-205ENST00000518060 SLC30A10Q6XR72 485 aa12.38□□□□□ -0.43
SPIDR-205ENST00000518060 FBXO16Q8IX29 292 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-205ENST00000518060 TDHQ8IZJ6 230 aa12.38□□□□□ -0.43
SPIDR-205ENST00000518060 ENAHQ8N8S7 591 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-205ENST00000518060 STARD7Q9NQZ5 370 aa12.38□□□□□ -0.43
SPIDR-205ENST00000518060 ZSWIM5Q9P217 1185 aa12.38□□□□□ -0.43
SPIDR-205ENST00000518060 PNMA2Q9UL42 364 aa12.38□□□□□ -0.43
SPIDR-205ENST00000518060 MYADML2A6NDP7 307 aa12.37□□□□□ -0.43
SPIDR-205ENST00000518060 ADAMTS4O75173 837 aa12.37□□□□□ -0.43
SPIDR-205ENST00000518060 PARP1P09874 1014 aaKnown RBP12.37□□□□□ -0.43
SPIDR-205ENST00000518060 BMP8BP34820 402 aa12.37□□□□□ -0.43
SPIDR-205ENST00000518060 TNFAIP2Q03169 654 aa12.37□□□□□ -0.43
SPIDR-205ENST00000518060 TLE2Q04725 743 aa12.37□□□□□ -0.43
SPIDR-205ENST00000518060 KCNA10Q16322 511 aa12.37□□□□□ -0.43
SPIDR-205ENST00000518060 CDC37Q16543 378 aaPredicted RBP12.37□□□□□ -0.43
SPIDR-205ENST00000518060 RNF207Q6ZRF8 634 aa12.37□□□□□ -0.43
SPIDR-205ENST00000518060 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
SPIDR-205ENST00000518060 RALYLQ86SE5 291 aaKnown RBP12.37□□□□□ -0.43
SPIDR-205ENST00000518060 NUP133Q8WUM0 1156 aa12.37□□□□□ -0.43
SPIDR-205ENST00000518060 ADD3Q9UEY8 706 aaKnown RBP12.37□□□□□ -0.43
SPIDR-205ENST00000518060 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
SPIDR-205ENST00000518060 LAMA4Q16363 1823 aa12.37□□□□□ -0.43
SPIDR-205ENST00000518060 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-205ENST00000518060 ERICH2A1L162 156 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 MOXD2PA6NHM9 499 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 SOX1O00570 391 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-205ENST00000518060 ADCY6O43306 1168 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 SNHG28P0DPA3 235 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-205ENST00000518060 BEX3Q00994 111 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 PTH1RQ03431 593 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 ASPRV1Q53RT3 343 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 GNASQ5JWF2 1037 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 PCSK9Q8NBP7 692 aaKnown RBP12.36□□□□□ -0.43
SPIDR-205ENST00000518060 LRCH3Q96II8 777 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 MPHOSPH6Q99547 160 aaKnown RBP12.36□□□□□ -0.43
SPIDR-205ENST00000518060 TSEN34Q9BSV6 310 aaKnown RBP12.36□□□□□ -0.43
SPIDR-205ENST00000518060 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 VAT1LQ9HCJ6 419 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 PDLIM7Q9NR12 457 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 ZNFX1Q9P2E3 1918 aaKnown RBP12.36□□□□□ -0.43
SPIDR-205ENST00000518060 ASTN1O14525 1302 aa12.36□□□□□ -0.43
SPIDR-205ENST00000518060 IFIT3O14879 490 aaKnown RBP12.35□□□□□ -0.43
SPIDR-205ENST00000518060 ASGR1P07306 291 aa12.35□□□□□ -0.43
SPIDR-205ENST00000518060 CLTBP09497 229 aa12.35□□□□□ -0.43
SPIDR-205ENST00000518060 ALDH5A1P51649 535 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-205ENST00000518060 SNX17Q15036 470 aa12.35□□□□□ -0.43
SPIDR-205ENST00000518060 CYB5R4Q7L1T6 521 aa12.35□□□□□ -0.43
SPIDR-205ENST00000518060 TLK2Q86UE8 772 aa12.35□□□□□ -0.43
SPIDR-205ENST00000518060 BADQ92934 168 aa12.35□□□□□ -0.43
SPIDR-205ENST00000518060 VTA1Q9NP79 307 aa12.35□□□□□ -0.43
SPIDR-205ENST00000518060 PDGFCQ9NRA1 345 aa12.35□□□□□ -0.43
SPIDR-205ENST00000518060 TMEM39AQ9NV64 488 aa12.35□□□□□ -0.43
SPIDR-205ENST00000518060 WDR19Q8NEZ3 1342 aa12.35□□□□□ -0.43
SPIDR-205ENST00000518060 DCDC2CA8MYV0 355 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 SGSM2O43147 1006 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 DYNC1LI2O43237 492 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-205ENST00000518060 CYP21A2P08686 494 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 SMPD1P17405 629 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 PTGS1P23219 599 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 GJA9P57773 515 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 PDE4DQ08499 809 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 SART3Q15020 963 aaKnown RBP12.34□□□□□ -0.43
SPIDR-205ENST00000518060 FSCN1Q16658 493 aaKnown RBP12.34□□□□□ -0.43
SPIDR-205ENST00000518060 SH3RF1Q7Z6J0 888 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 KLHDC9Q8NEP7 349 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 CLEC4DQ8WXI8 215 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 ANKS1AQ92625 1134 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 KATNBL1Q9H079 304 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 UPF3AQ9H1J1 476 aaKnown RBP12.34□□□□□ -0.43
SPIDR-205ENST00000518060 ABCB11O95342 1321 aa12.34□□□□□ -0.43
SPIDR-205ENST00000518060 A0A0U1RQG5 324 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-205ENST00000518060 TRIM43BA6NCK2 446 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 ZEB2O60315 1214 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 RAG1P15918 1043 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 CST5P28325 142 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-205ENST00000518060 RPS6P62753 249 aaKnown RBP12.33□□□□□ -0.44
SPIDR-205ENST00000518060 WTAPQ15007 396 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 QRICH1Q2TAL8 776 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 C1orf53Q5VUE5 145 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 CXCL17Q6UXB2 119 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 CHST3Q7LGC8 479 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 SKAP1Q86WV1 359 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 FBXO11Q86XK2 927 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 HOMER1Q86YM7 354 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms