RNA–Protein interactions for RNA: ENST00000515802.5

SH3BP2-229, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,247 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-229ENST00000515802 ZBTB5O15062 677 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 EDIL3O43854 480 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 VIL1P09327 827 aaKnown RBP17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 CUL4BQ13620 913 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 RRP1BQ14684 758 aaKnown RBP17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 HSP90AA4PQ58FG1 418 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 SMYD4Q8IYR2 804 aaPredicted RBP17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 SLC16A10Q8TF71 515 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 GTPBP6O43824 516 aaPredicted RBP17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 RAD21O60216 631 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 SERPINC1P01008 464 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 ZSCAN20P17040 1043 aaPredicted RBP17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 ERCC5P28715 1186 aaPredicted RBP17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 STAT6P42226 847 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 UBASH3AP57075 661 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 CCZ1BP86790 482 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 CCZ1P86791 482 aaPredicted RBP17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 ABCB5Q2M3G0 1257 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 LRRC15Q8TF66 581 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 CSRNP1Q96S65 589 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 RIC8AQ9NPQ8 531 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 INTS13Q9NVM9 706 aa17.04■□□□□ 0.32
SH3BP2-229ENST00000515802 SLC1A4P43007 532 aa17.03■□□□□ 0.32
SH3BP2-229ENST00000515802 SLFN13Q68D06 897 aa17.03■□□□□ 0.32
SH3BP2-229ENST00000515802 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
SH3BP2-229ENST00000515802 DCAF4Q8WV16 495 aa17.03■□□□□ 0.32
SH3BP2-229ENST00000515802 CCSER1Q9C0I3 900 aa17.03■□□□□ 0.32
SH3BP2-229ENST00000515802 ZBTB12Q9Y330 459 aaPredicted RBP17.03■□□□□ 0.32
SH3BP2-229ENST00000515802 BRCA1P38398 1863 aaKnown RBP17.03■□□□□ 0.32
SH3BP2-229ENST00000515802 CLRN2A0PK11 232 aa17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 CLK2P49760 499 aaKnown RBP17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 GSDMDP57764 484 aa17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 UBE2SQ16763 222 aa17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 PRDM10Q9NQV6 1147 aa17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 PPP1R3GB7ZBB8 358 aa17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 TCP10L2B9ZVM9 353 aa17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 GH2P01242 217 aa17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 UBA7P41226 1012 aa17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 ORC2Q13416 577 aaPredicted RBP17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 ARMCX5Q6P1M9 558 aa17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 SAMSN1Q9NSI8 373 aaKnown RBP17.02■□□□□ 0.32
SH3BP2-229ENST00000515802 TMEM232C9JQI7 657 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 CBFA2T2O43439 604 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 SLC37A4O43826 429 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 CT47A1Q5JQC4 288 aaPredicted RBP17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 RRAGBQ5VZM2 374 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 KLHL10Q6JEL2 608 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 AK8Q96MA6 479 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 SYNRGQ9UMZ2 1314 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 CNTNAP1P78357 1384 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 FER1L6Q2WGJ9 1857 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 TDP2O95551 362 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 SKILP12757 684 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 TERF1P54274 439 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 QRICH1Q2TAL8 776 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 DNTTIP2Q5QJE6 756 aaKnown RBP17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 GMCL1P1Q8NEA9 526 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 CUL5Q93034 780 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 MTMR9Q96QG7 549 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 PLIN2Q99541 437 aa17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 ZNF70Q9UC06 446 aaPredicted RBP17.01■□□□□ 0.31
SH3BP2-229ENST00000515802 F5H6K3 240 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 TNNI2P48788 182 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 IRX3P78415 501 aaPredicted RBP17■□□□□ 0.31
SH3BP2-229ENST00000515802 KLRC3Q07444 240 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 DLGAP5Q15398 846 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 PTPN21Q16825 1174 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17■□□□□ 0.31
SH3BP2-229ENST00000515802 MTERF4Q7Z6M4 381 aaKnown RBP17■□□□□ 0.31
SH3BP2-229ENST00000515802 RASSF8Q8NHQ8 419 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 NUP88Q99567 741 aaPredicted RBP17■□□□□ 0.31
SH3BP2-229ENST00000515802 TMOD2Q9NZR1 351 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 NDUFB10O96000 172 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 RPN1P04843 607 aaKnown RBP17■□□□□ 0.31
SH3BP2-229ENST00000515802 TECP42680 631 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 STX17P56962 302 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 CDC37Q16543 378 aaPredicted RBP17■□□□□ 0.31
SH3BP2-229ENST00000515802 RBM26Q5T8P6 1007 aaKnown RBP17■□□□□ 0.31
SH3BP2-229ENST00000515802 CABP7Q86V35 215 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 VSTM4Q8IW00 320 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 IGSF22Q8N9C0 903 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 KBTBD4Q9NVX7 518 aa17■□□□□ 0.31
SH3BP2-229ENST00000515802 HERC5Q9UII4 1024 aaKnown RBP17■□□□□ 0.31
SH3BP2-229ENST00000515802 UTRNP46939 3433 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 PLCG1P19174 1290 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 SPATA1Q5VX52 437 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 CNPY4Q8N129 248 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 OGFOD1Q8N543 542 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 CCDC150Q8NCX0 1101 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 GMCL1Q96IK5 515 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 MMTAG2Q9BU76 263 aaKnown RBP16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 PSTPIP2Q9H939 334 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 KCNG1Q9UIX4 513 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 HDAC9Q9UKV0 1011 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 ZNRF3Q9ULT6 936 aa16.99■□□□□ 0.31
SH3BP2-229ENST00000515802 A0A1W2PRG0 241 aa16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 ZBTB7AO95365 584 aa16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 CALCRLQ16602 461 aa16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 NIM1KQ8IY84 436 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms