RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 ATG2AQ2TAZ0 1938 aa11.56□□□□□ -0.56
CLCN3-208ENST00000512813 H3BNC9 293 aa11.55□□□□□ -0.56
CLCN3-208ENST00000512813 TBX10O75333 385 aa11.55□□□□□ -0.56
CLCN3-208ENST00000512813 PLCG2P16885 1265 aa11.55□□□□□ -0.56
CLCN3-208ENST00000512813 RFX5P48382 616 aaPredicted RBP11.55□□□□□ -0.56
CLCN3-208ENST00000512813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLCN3-208ENST00000512813 TGFBRAP1Q8WUH2 860 aa11.55□□□□□ -0.56
CLCN3-208ENST00000512813 SAMD11Q96NU1 681 aa11.55□□□□□ -0.56
CLCN3-208ENST00000512813 NOL10Q9BSC4 688 aaKnown RBP11.55□□□□□ -0.56
CLCN3-208ENST00000512813 KATNBL1Q9H079 304 aa11.55□□□□□ -0.56
CLCN3-208ENST00000512813 CD207Q9UJ71 328 aa11.55□□□□□ -0.56
CLCN3-208ENST00000512813 ADAMTS5Q9UNA0 930 aa11.55□□□□□ -0.56
CLCN3-208ENST00000512813 A0A1W2PRG0 241 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 ZEB2O60315 1214 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 EYA4O95677 639 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 ADORA1P30542 326 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 ICAM3P32942 547 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 GUCY1A2P33402 732 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLCN3-208ENST00000512813 PTPN21Q16825 1174 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 EPC2Q52LR7 807 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 TLK2Q86UE8 772 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 RETREG2Q8NC44 543 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 EHD4Q9H223 541 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 CABP5Q9NP86 173 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 AATFQ9NY61 560 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLCN3-208ENST00000512813 GNEQ9Y223 722 aaKnown RBP11.54□□□□□ -0.56
CLCN3-208ENST00000512813 CEP295Q9C0D2 2601 aa11.54□□□□□ -0.56
CLCN3-208ENST00000512813 BAG3O95817 575 aa11.53□□□□□ -0.56
CLCN3-208ENST00000512813 STAT3P40763 770 aa11.53□□□□□ -0.56
CLCN3-208ENST00000512813 TNFAIP2Q03169 654 aa11.53□□□□□ -0.56
CLCN3-208ENST00000512813 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-208ENST00000512813 GPM6BQ13491 265 aa11.53□□□□□ -0.56
CLCN3-208ENST00000512813 LRRFIP1Q32MZ4 808 aaKnown RBP11.53□□□□□ -0.56
CLCN3-208ENST00000512813 CERKLQ49MI3 558 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-208ENST00000512813 KIAA1755Q5JYT7 1200 aa11.53□□□□□ -0.56
CLCN3-208ENST00000512813 SP7Q8TDD2 431 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-208ENST00000512813 CEP126Q9P2H0 1117 aa11.53□□□□□ -0.56
CLCN3-208ENST00000512813 SAP30BPQ9UHR5 308 aaKnown RBP11.53□□□□□ -0.56
CLCN3-208ENST00000512813 SERPINB13Q9UIV8 391 aa11.53□□□□□ -0.56
CLCN3-208ENST00000512813 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
CLCN3-208ENST00000512813 ZNF214Q9UL59 606 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-208ENST00000512813 ADAMTS8Q9UP79 889 aa11.53□□□□□ -0.56
CLCN3-208ENST00000512813 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.52□□□□□ -0.57
CLCN3-208ENST00000512813 CIAO1O76071 339 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 LMNAP02545 664 aaKnown RBP11.52□□□□□ -0.57
CLCN3-208ENST00000512813 PPP4CP60510 307 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 HYAL1Q12794 435 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 BFSP2Q13515 415 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 CNKSR3Q6P9H4 555 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 ARMCX2Q7L311 632 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 MSLNLQ96KJ4 702 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 FGD4Q96M96 766 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 SEMA4AQ9H3S1 761 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 SH2B1Q9NRF2 756 aaPredicted RBP11.52□□□□□ -0.57
CLCN3-208ENST00000512813 RAI14Q9P0K7 980 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 INSL6Q9Y581 213 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 MYH1P12882 1939 aa11.52□□□□□ -0.57
CLCN3-208ENST00000512813 ABHD14A-ACY1A0A1B0GW23 586 aa11.51□□□□□ -0.57
CLCN3-208ENST00000512813 APAF1O14727 1248 aa11.51□□□□□ -0.57
CLCN3-208ENST00000512813 EFCAB14O75071 495 aa11.51□□□□□ -0.57
CLCN3-208ENST00000512813 SEPT2Q15019 361 aa11.51□□□□□ -0.57
CLCN3-208ENST00000512813 RSPO4Q2I0M5 234 aaPredicted RBP11.51□□□□□ -0.57
CLCN3-208ENST00000512813 SLC4A10Q6U841 1118 aa11.51□□□□□ -0.57
CLCN3-208ENST00000512813 NOL8Q76FK4 1167 aaKnown RBP11.51□□□□□ -0.57
CLCN3-208ENST00000512813 SMRP1Q8NCR6 262 aa11.51□□□□□ -0.57
CLCN3-208ENST00000512813 DDX11Q96FC9 970 aa11.51□□□□□ -0.57
CLCN3-208ENST00000512813 AP5M1Q9H0R1 490 aa11.51□□□□□ -0.57
CLCN3-208ENST00000512813 PCDHGC5Q9Y5F6 944 aa11.51□□□□□ -0.57
CLCN3-208ENST00000512813 NLRC5Q86WI3 1866 aa11.51□□□□□ -0.57
CLCN3-208ENST00000512813 VWA5AO00534 786 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 WDR46O15213 610 aaKnown RBP11.5□□□□□ -0.57
CLCN3-208ENST00000512813 MCAMP43121 646 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 HTRA4P83105 476 aaPredicted RBP11.5□□□□□ -0.57
CLCN3-208ENST00000512813 GPNMBQ14956 572 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 KIAA0319Q5VV43 1072 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 ASTLQ6HA08 431 aaPredicted RBP11.5□□□□□ -0.57
CLCN3-208ENST00000512813 FAM117BQ6P1L5 589 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 TBC1D9Q6ZT07 1266 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 REPS2Q8NFH8 660 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 HMG20BQ9P0W2 317 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 RALGAPA2Q2PPJ7 1873 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 SCN10AQ9Y5Y9 1956 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 ASPMQ8IZT6 3477 aa11.5□□□□□ -0.57
CLCN3-208ENST00000512813 ZZEF1O43149 2961 aa11.49□□□□□ -0.57
CLCN3-208ENST00000512813 CXCL10P02778 98 aa11.49□□□□□ -0.57
CLCN3-208ENST00000512813 SHMT1P34896 483 aa11.49□□□□□ -0.57
CLCN3-208ENST00000512813 PI16Q6UXB8 463 aa11.49□□□□□ -0.57
CLCN3-208ENST00000512813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLCN3-208ENST00000512813 FBXO11Q86XK2 927 aa11.49□□□□□ -0.57
CLCN3-208ENST00000512813 CCDC144CPQ8IYA2 1237 aa11.49□□□□□ -0.57
CLCN3-208ENST00000512813 KCNG4Q8TDN1 519 aa11.49□□□□□ -0.57
CLCN3-208ENST00000512813 AFAP1L1Q8TED9 768 aa11.49□□□□□ -0.57
CLCN3-208ENST00000512813 CHAMP1Q96JM3 812 aa11.49□□□□□ -0.57
CLCN3-208ENST00000512813 PHF7Q9BWX1 381 aaPredicted RBP11.49□□□□□ -0.57
CLCN3-208ENST00000512813 Q9Y3F1 56 aa11.49□□□□□ -0.57
CLCN3-208ENST00000512813 LINC01565O15544 149 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 DYNC1LI2O43237 492 aaPredicted RBP11.48□□□□□ -0.57
CLCN3-208ENST00000512813 ADRB1P08588 477 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 SMPD1P17405 629 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms