RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 FBXO11Q86XK2 927 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 FBXL16Q8N461 479 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 MSL3Q8N5Y2 521 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 MTMR8Q96EF0 704 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 AMNQ9BXJ7 453 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 TM6SF1Q9BZW5 370 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 ZSWIM6Q9HCJ5 1215 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 A1CFQ9NQ94 594 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 CYP39A1Q9NYL5 469 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 CYP46A1Q9Y6A2 500 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 PLXNB2O15031 1838 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 ABCB11O95342 1321 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 KLF18A0A0U1RQI7 1052 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 CYTH3O43739 400 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 SEC24BO95487 1268 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 TAL1P17542 331 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 CAPN2P17655 700 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 EN2P19622 333 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 RXRAP19793 462 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 GJA8P48165 433 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 RGS19P49795 217 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 ANAPC15P60006 121 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 CNTN2Q02246 1040 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 BAATQ14032 418 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 USH1GQ495M9 461 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 C8orf34Q49A92 452 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 NSMFQ6X4W1 530 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 MICU3Q86XE3 530 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 HOMER1Q86YM7 354 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 CCDC144CPQ8IYA2 1237 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 FAM133AQ8N9E0 248 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 RGS22Q8NE09 1264 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 CLEC4DQ8WXI8 215 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 BRF1Q92994 677 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 TINF2Q9BSI4 451 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 SPZ1Q9BXG8 430 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 MAF1Q9H063 256 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 PAK6Q9NQU5 681 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 RBM28Q9NW13 759 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 BRPF3Q9ULD4 1205 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 NAP1L2Q9ULW6 460 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 MRPL11Q9Y3B7 192 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 ZNF236Q9UL36 1845 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 HTTP42858 3142 aa8.3□□□□□ -1.08
PDLIM5-215ENST00000511586 CCDC196A0A1B0GTZ2 297 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 PTPDC1A2A3K4 754 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 NFIBO00712 420 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 SGPL1O95470 568 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 TFRCP02786 760 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 CNGA1P29973 690 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 CCND3P30281 292 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 RCAN1P53805 252 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 APOBRQ0VD83 1088 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 PPP2R5BQ15173 497 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 RTN1Q16799 776 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 SLC35G1Q2M3R5 365 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 MAMDC4Q6UXC1 1216 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 RNF207Q6ZRF8 634 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 MCF2L2Q86YR7 1114 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 RAB11FIP4Q86YS3 637 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 SRBD1Q8N5C6 995 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 U2AF1L4Q8WU68 220 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 PIBF1Q8WXW3 757 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 RRP36Q96EU6 259 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 DEFB118Q96PH6 123 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 PIGSQ96S52 555 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 AGXT2Q9BYV1 514 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 UPF3BQ9BZI7 483 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 PDRG1Q9NUG6 133 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 SEC63Q9UGP8 760 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 NRBP1Q9UHY1 535 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 CNPY2Q9Y2B0 182 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 PCDHA1Q9Y5I3 950 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 SYNGAP1Q96PV0 1343 aa8.29□□□□□ -1.08
PDLIM5-215ENST00000511586 SOWAHBA6NEL2 793 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 ASB14A6NK59 587 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 GOLGA8AA7E2F4 631 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 GOLGA8BA8MQT2 603 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 MSCO60682 206 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 PPP1R11O60927 126 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 PLEKHA8P1O95397 391 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 CYBAP13498 195 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 CALML3P27482 149 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 METAP2P50579 478 aaKnown RBP eCLIP8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 EVCP57679 992 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 RPS6P62753 249 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 PRAMEF19Q5SWL8 479 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 TMTC3Q6ZXV5 915 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 CMTR1Q8N1G2 835 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 CCDC82Q8N4S0 544 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 SAMD3Q8N6K7 520 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 TRPV1Q8NER1 839 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 IL17RAQ96F46 866 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 FGD4Q96M96 766 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 CRISPLD2Q9H0B8 497 aa8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 MAP3K20Q9NYL2 800 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 ADD3Q9UEY8 706 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-215ENST00000511586 CENPFP49454 3210 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms