RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 MYSM1Q5VVJ2 828 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 SPRYD7Q5W111 196 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 CLIC6Q96NY7 704 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 GBP4Q96PP9 640 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 MAP3K14Q99558 947 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 BTBD7Q9P203 1132 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 CPA4Q9UI42 421 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 ME1P48163 572 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 PPIL2Q13356 520 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 STK38Q15208 465 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 RGMBQ6NW40 437 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 TBCKQ8TEA7 893 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 TRERF1Q96PN7 1200 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 PCDHA4Q9UN74 947 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 A0A0G2JLL6 359 aaPredicted RBP9.22□□□□□ -0.93
SMAD1-209ENST00000511125 TOB1P50616 345 aaPredicted RBP9.22□□□□□ -0.93
SMAD1-209ENST00000511125 EEPD1Q7L9B9 569 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 PRRT2Q7Z6L0 340 aaPredicted RBP9.22□□□□□ -0.93
SMAD1-209ENST00000511125 CCAR1Q8IX12 1150 aaKnown RBP9.22□□□□□ -0.93
SMAD1-209ENST00000511125 REXO1Q8N1G1 1221 aaKnown RBP9.22□□□□□ -0.93
SMAD1-209ENST00000511125 RBM46Q8TBY0 533 aaKnown RBP9.22□□□□□ -0.93
SMAD1-209ENST00000511125 RBM27Q9P2N5 1060 aaKnown RBP9.22□□□□□ -0.93
SMAD1-209ENST00000511125 TCHHQ07283 1943 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 ZNF536O15090 1300 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 GOLGA6L4A6NEF3 574 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 TMEM88BA6NKF7 163 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 CCNT1O60563 726 aaKnown RBP9.22□□□□□ -0.93
SMAD1-209ENST00000511125 PGK2P07205 417 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 DSG3P32926 999 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 HERVK_113P62684 666 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 KRT85P78386 507 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 GRIN1Q05586 938 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 FAM160B2Q86V87 743 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 ATAD5Q96QE3 1844 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 OPLAHO14841 1288 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 MYCLP12524 364 aaPredicted RBP9.22□□□□□ -0.93
SMAD1-209ENST00000511125 STAT3P40763 770 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 MAP3K11Q16584 847 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 CCDC148Q8NFR7 591 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 CYP2W1Q8TAV3 490 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 CUL5Q93034 780 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 PLIN2Q99541 437 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 EFCC1Q9HA90 598 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 RNF146Q9NTX7 359 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 TSKSQ9UJT2 592 aa9.22□□□□□ -0.93
SMAD1-209ENST00000511125 A0A087WWV3 80 aa9.21□□□□□ -0.93
SMAD1-209ENST00000511125 IGF2BP3O00425 579 aaKnown RBP eCLIP9.21□□□□□ -0.93
SMAD1-209ENST00000511125 EIF2AK2P19525 551 aaKnown RBP9.21□□□□□ -0.93
SMAD1-209ENST00000511125 GPAT2Q6NUI2 795 aa9.21□□□□□ -0.93
SMAD1-209ENST00000511125 SLC38A10Q9HBR0 1119 aa9.21□□□□□ -0.93
SMAD1-209ENST00000511125 HOXC10Q9NYD6 342 aa9.21□□□□□ -0.93
SMAD1-209ENST00000511125 MYH6P13533 1939 aa9.21□□□□□ -0.93
SMAD1-209ENST00000511125 CXCL11O14625 94 aa9.21□□□□□ -0.94
SMAD1-209ENST00000511125 MARCH6O60337 910 aa9.21□□□□□ -0.94
SMAD1-209ENST00000511125 TDP2O95551 362 aa9.21□□□□□ -0.94
SMAD1-209ENST00000511125 GNA11P29992 359 aa9.21□□□□□ -0.94
SMAD1-209ENST00000511125 BAATQ14032 418 aaPredicted RBP9.21□□□□□ -0.94
SMAD1-209ENST00000511125 BTNL9Q6UXG8 535 aa9.21□□□□□ -0.94
SMAD1-209ENST00000511125 RASAL3Q86YV0 1011 aa9.21□□□□□ -0.94
SMAD1-209ENST00000511125 ERCC4Q92889 916 aaPredicted RBP9.21□□□□□ -0.94
SMAD1-209ENST00000511125 RANBP17Q9H2T7 1088 aaKnown RBP9.21□□□□□ -0.94
SMAD1-209ENST00000511125 ZSCAN16Q9H4T2 348 aaPredicted RBP9.21□□□□□ -0.94
SMAD1-209ENST00000511125 AGTPBP1Q9UPW5 1226 aa9.21□□□□□ -0.94
SMAD1-209ENST00000511125 ATP6V1DQ9Y5K8 247 aa9.21□□□□□ -0.94
SMAD1-209ENST00000511125 NID2Q14112 1375 aa9.21□□□□□ -0.94
SMAD1-209ENST00000511125 ZNF76P36508 570 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 NT5C2P49902 561 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 MRPL12P52815 198 aaKnown RBP9.2□□□□□ -0.94
SMAD1-209ENST00000511125 CNTN2Q02246 1040 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 MOGSQ13724 837 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 ANKRD35Q8N283 1001 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 PDILTQ8N807 584 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 IL27Q8NEV9 243 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 BICD2Q8TD16 824 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 LEO1Q8WVC0 666 aaPredicted RBP9.2□□□□□ -0.94
SMAD1-209ENST00000511125 ZMYND12Q9H0C1 365 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 PORCNQ9H237 461 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 COL20A1Q9P218 1284 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 SPDYE3A6NKU9 549 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 GOLGA6L22H0YM25 854 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 RBAK-RBAKDNI3L0D1 243 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 MEIS2O14770 477 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 CETPP11597 493 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 GTF2A2P52657 109 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 RPS6P62753 249 aaKnown RBP9.2□□□□□ -0.94
SMAD1-209ENST00000511125 SP4Q02446 784 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 ANO1Q5XXA6 986 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 FASTKD5Q7L8L6 764 aaKnown RBP9.2□□□□□ -0.94
SMAD1-209ENST00000511125 CCDC12Q8WUD4 166 aaPredicted RBP9.2□□□□□ -0.94
SMAD1-209ENST00000511125 TAAR1Q96RJ0 339 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 RBPJLQ9UBG7 517 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 PASKQ96RG2 1323 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 ICAM1P05362 532 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 ERCC3P19447 782 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 U2AF2P26368 475 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMAD1-209ENST00000511125 FSTL1Q12841 308 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 TAF1CQ15572 869 aaPredicted RBP9.2□□□□□ -0.94
SMAD1-209ENST00000511125 CAMK4Q16566 473 aa9.2□□□□□ -0.94
SMAD1-209ENST00000511125 TTC38Q5R3I4 469 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms