RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 NOC4LQ9BVI4 516 aaKnown RBP12.32□□□□□ -0.44
MBD4-208ENST00000509828 NACAP1Q9BZK3 213 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 FTOQ9C0B1 505 aaKnown RBP eCLIP12.32□□□□□ -0.44
MBD4-208ENST00000509828 CERS4Q9HA82 394 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 MTMR4Q9NYA4 1195 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 PLXNA1Q9UIW2 1896 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 GSG1L2A8MUP6 293 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 KIF28PB7ZC32 967 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 B4GALT4O60513 344 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 BMP1P13497 986 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 SMPD1P17405 629 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 GNAT2P19087 354 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 SLC1A4P43007 532 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 PDE4BQ07343 736 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 BRDTQ58F21 947 aaPredicted RBP12.31□□□□□ -0.44
MBD4-208ENST00000509828 FAM47CQ5HY64 1035 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 NSMFQ6X4W1 530 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 RETREG2Q8NC44 543 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 GMCL1P1Q8NEA9 526 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 STAG1Q8WVM7 1258 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 MKL1Q969V6 931 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 CEP95Q96GE4 821 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 LRRCC1Q9C099 1032 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 A1CFQ9NQ94 594 aaKnown RBP12.31□□□□□ -0.44
MBD4-208ENST00000509828 DDX19BQ9UMR2 479 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 MTMR7Q9Y216 660 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 HCN4Q9Y3Q4 1203 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 COL11A1P12107 1806 aaPredicted RBP12.31□□□□□ -0.44
MBD4-208ENST00000509828 PRUNE2Q8WUY3 3088 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 MYH8P13535 1937 aa12.31□□□□□ -0.44
MBD4-208ENST00000509828 SOWAHBA6NEL2 793 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 RFXAPO00287 272 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 CTAGE5O15320 804 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 PFKMP08237 780 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 MYL3P08590 195 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 MCCP23508 829 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 KCNQ1P51787 676 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 CHMP4BP1P59074 171 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 TFAP4Q01664 338 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 LRRFIP1Q32MZ4 808 aaKnown RBP12.3□□□□□ -0.44
MBD4-208ENST00000509828 PPP4R3BQ5MIZ7 849 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
MBD4-208ENST00000509828 FBXO16Q8IX29 292 aaPredicted RBP12.3□□□□□ -0.44
MBD4-208ENST00000509828 SLC43A3Q8NBI5 491 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 FGD4Q96M96 766 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 PDGFCQ9NRA1 345 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 ECHDC1Q9NTX5 307 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 POLR3EQ9NVU0 708 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 SYNPO2Q9UMS6 1093 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 GNEQ9Y223 722 aaKnown RBP12.3□□□□□ -0.44
MBD4-208ENST00000509828 NOD1Q9Y239 953 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 Q9Y3F1 56 aa12.3□□□□□ -0.44
MBD4-208ENST00000509828 RNF113AO15541 343 aaKnown RBP12.29□□□□□ -0.44
MBD4-208ENST00000509828 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
MBD4-208ENST00000509828 CA3P07451 260 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 CYP2C9P11712 490 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 SNAP25P60880 206 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 NKX3-2P78367 333 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 ARNTL2Q8WYA1 636 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 APPBP2Q92624 585 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 KATNBL1Q9H079 304 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 WNT8AQ9H1J5 351 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 ALDH8A1Q9H2A2 487 aaPredicted RBP12.29□□□□□ -0.44
MBD4-208ENST00000509828 VTA1Q9NP79 307 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 COG5Q9UP83 839 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 EYSQ5T1H1 3165 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 ASTN1O14525 1302 aa12.29□□□□□ -0.44
MBD4-208ENST00000509828 BAZ2AQ9UIF9 1905 aaKnown RBP12.29□□□□□ -0.44
MBD4-208ENST00000509828 IGKV6D-41A0A0C4DH26 115 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 PATL2C9JE40 543 aaKnown RBP12.28□□□□□ -0.44
MBD4-208ENST00000509828 ERC2O15083 957 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 GPAA1O43292 621 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 ZFYP08048 801 aaPredicted RBP12.28□□□□□ -0.44
MBD4-208ENST00000509828 CPT1AP50416 773 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 TTLL4Q14679 1199 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 KCTD1Q719H9 257 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 NEDD1Q8NHV4 660 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 OSBP2Q969R2 916 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 MPHOSPH6Q99547 160 aaKnown RBP12.28□□□□□ -0.44
MBD4-208ENST00000509828 ZBED2Q9BTP6 218 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 TRMT13Q9NUP7 481 aaKnown RBP12.28□□□□□ -0.44
MBD4-208ENST00000509828 ADD3Q9UEY8 706 aaKnown RBP12.28□□□□□ -0.44
MBD4-208ENST00000509828 CCPG1Q9ULG6 757 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 STX8Q9UNK0 236 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 DDX49Q9Y6V7 483 aaKnown RBP12.28□□□□□ -0.44
MBD4-208ENST00000509828 GRIN2DO15399 1336 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 TNKSO95271 1327 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 VCANP13611 3396 aa12.28□□□□□ -0.44
MBD4-208ENST00000509828 TSPY2A6NKD2 308 aa12.27□□□□□ -0.45
MBD4-208ENST00000509828 PTGS1P23219 599 aa12.27□□□□□ -0.45
MBD4-208ENST00000509828 KCNJ6P48051 423 aa12.27□□□□□ -0.45
MBD4-208ENST00000509828 CCDC96Q2M329 555 aa12.27□□□□□ -0.45
MBD4-208ENST00000509828 TMEM31Q5JXX7 168 aa12.27□□□□□ -0.45
MBD4-208ENST00000509828 RCSD1Q6JBY9 416 aa12.27□□□□□ -0.45
MBD4-208ENST00000509828 TAPT1Q6NXT6 567 aa12.27□□□□□ -0.45
MBD4-208ENST00000509828 IFNL3Q8IZI9 196 aa12.27□□□□□ -0.45
MBD4-208ENST00000509828 KBTBD3Q8NAB2 608 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms