RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 PNMA1Q8ND90 353 aa21.05■□□□□ 0.96
TPM3-220ENST00000509601 CLEC4DQ8WXI8 215 aa21.05■□□□□ 0.96
TPM3-220ENST00000509601 TSEN34Q9BSV6 310 aaKnown RBP21.05■□□□□ 0.96
TPM3-220ENST00000509601 KRT23Q9C075 422 aa21.05■□□□□ 0.96
TPM3-220ENST00000509601 UBA5Q9GZZ9 404 aa21.05■□□□□ 0.96
TPM3-220ENST00000509601 CPVLQ9H3G5 476 aa21.05■□□□□ 0.96
TPM3-220ENST00000509601 RAD50Q92878 1312 aa21.04■□□□□ 0.96
TPM3-220ENST00000509601 SYNRGQ9UMZ2 1314 aa21.04■□□□□ 0.96
TPM3-220ENST00000509601 MYADML2A6NDP7 307 aa21.04■□□□□ 0.96
TPM3-220ENST00000509601 ASB14A6NK59 587 aa21.04■□□□□ 0.96
TPM3-220ENST00000509601 NFIBO00712 420 aa21.04■□□□□ 0.96
TPM3-220ENST00000509601 MDM2Q00987 491 aaPredicted RBP21.04■□□□□ 0.96
TPM3-220ENST00000509601 BAATQ14032 418 aaPredicted RBP21.04■□□□□ 0.96
TPM3-220ENST00000509601 LAMA4Q16363 1823 aa21.04■□□□□ 0.96
TPM3-220ENST00000509601 CYP21A2P08686 494 aa21.03■□□□□ 0.96
TPM3-220ENST00000509601 GJA9P57773 515 aa21.03■□□□□ 0.96
TPM3-220ENST00000509601 KCNA10Q16322 511 aa21.03■□□□□ 0.96
TPM3-220ENST00000509601 GPATCH4Q5T3I0 446 aaKnown RBP21.03■□□□□ 0.96
TPM3-220ENST00000509601 CYB5R4Q7L1T6 521 aa21.03■□□□□ 0.96
TPM3-220ENST00000509601 MORC4Q8TE76 937 aa21.03■□□□□ 0.96
TPM3-220ENST00000509601 RUFY2Q8WXA3 655 aa21.03■□□□□ 0.96
TPM3-220ENST00000509601 UBE2OQ9C0C9 1292 aaKnown RBP21.03■□□□□ 0.96
TPM3-220ENST00000509601 UPF3AQ9H1J1 476 aaKnown RBP21.03■□□□□ 0.96
TPM3-220ENST00000509601 KAT14Q9H8E8 782 aa21.03■□□□□ 0.96
TPM3-220ENST00000509601 CNNM2Q9H8M5 875 aa21.03■□□□□ 0.96
TPM3-220ENST00000509601 TNKSO95271 1327 aa21.03■□□□□ 0.96
TPM3-220ENST00000509601 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.02■□□□□ 0.96
TPM3-220ENST00000509601 A0A1W2PQ45 241 aaPredicted RBP21.02■□□□□ 0.96
TPM3-220ENST00000509601 A0A1W2PQY0 241 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 CTAGE5O15320 804 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 SGSM2O43147 1006 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 ACLYP53396 1101 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 NKX3-2P78367 333 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 TLE2Q04725 743 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 SEC23AQ15436 765 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 TAPT1Q6NXT6 567 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 SH3RF1Q7Z6J0 888 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 PDGFCQ9NRA1 345 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 TAF6LQ9Y6J9 622 aa21.02■□□□□ 0.96
TPM3-220ENST00000509601 CST5P28325 142 aaPredicted RBP21.01■□□□□ 0.95
TPM3-220ENST00000509601 TDHQ8IZJ6 230 aa21.01■□□□□ 0.95
TPM3-220ENST00000509601 PNMA2Q9UL42 364 aa21.01■□□□□ 0.95
TPM3-220ENST00000509601 GNEQ9Y223 722 aaKnown RBP21.01■□□□□ 0.95
TPM3-220ENST00000509601 WDR19Q8NEZ3 1342 aa21.01■□□□□ 0.95
TPM3-220ENST00000509601 TRIM43BA6NCK2 446 aa21■□□□□ 0.95
TPM3-220ENST00000509601 MOXD2PA6NHM9 499 aa21■□□□□ 0.95
TPM3-220ENST00000509601 TNFAIP2Q03169 654 aa21■□□□□ 0.95
TPM3-220ENST00000509601 TMEM63BQ5T3F8 832 aa21■□□□□ 0.95
TPM3-220ENST00000509601 MAP4K1Q92918 833 aa21■□□□□ 0.95
TPM3-220ENST00000509601 TRIM43Q96BQ3 446 aaPredicted RBP21■□□□□ 0.95
TPM3-220ENST00000509601 LRCH3Q96II8 777 aa21■□□□□ 0.95
TPM3-220ENST00000509601 PDLIM7Q9NR12 457 aa21■□□□□ 0.95
TPM3-220ENST00000509601 LCTP09848 1927 aa21■□□□□ 0.95
TPM3-220ENST00000509601 C6orf222P0C671 652 aaPredicted RBP20.99■□□□□ 0.95
TPM3-220ENST00000509601 SMPD1P17405 629 aa20.99■□□□□ 0.95
TPM3-220ENST00000509601 PTGS1P23219 599 aa20.99■□□□□ 0.95
TPM3-220ENST00000509601 LRIT3Q3SXY7 679 aa20.99■□□□□ 0.95
TPM3-220ENST00000509601 IQSEC1Q6DN90 963 aa20.99■□□□□ 0.95
TPM3-220ENST00000509601 EEPD1Q7L9B9 569 aa20.99■□□□□ 0.95
TPM3-220ENST00000509601 ADGRF4Q8IZF3 695 aa20.99■□□□□ 0.95
TPM3-220ENST00000509601 UBAC1Q9BSL1 405 aa20.99■□□□□ 0.95
TPM3-220ENST00000509601 PRKAG2Q9UGJ0 569 aa20.99■□□□□ 0.95
TPM3-220ENST00000509601 U3KPZ7 1027 aaPredicted RBP20.99■□□□□ 0.95
TPM3-220ENST00000509601 PTPDC1A2A3K4 754 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 ASGR1P07306 291 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 ITGB8P26012 769 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 ALDH5A1P51649 535 aaPredicted RBP20.98■□□□□ 0.95
TPM3-220ENST00000509601 RPS6P62753 249 aaKnown RBP20.98■□□□□ 0.95
TPM3-220ENST00000509601 ASPRV1Q53RT3 343 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 GNASQ5JWF2 1037 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 SLC30A10Q6XR72 485 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 RNF207Q6ZRF8 634 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 STAG2Q8N3U4 1231 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 PCSK9Q8NBP7 692 aaKnown RBP20.98■□□□□ 0.95
TPM3-220ENST00000509601 RGS22Q8NE09 1264 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 NUP133Q8WUM0 1156 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 TBC1D5Q92609 795 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 LBHD1Q9BQE6 289 aaPredicted RBP20.98■□□□□ 0.95
TPM3-220ENST00000509601 JMJD4Q9H9V9 463 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 STARD7Q9NQZ5 370 aa20.98■□□□□ 0.95
TPM3-220ENST00000509601 ADD3Q9UEY8 706 aaKnown RBP20.98■□□□□ 0.95
TPM3-220ENST00000509601 PARP1P09874 1014 aaKnown RBP20.97■□□□□ 0.95
TPM3-220ENST00000509601 CALML3P27482 149 aa20.97■□□□□ 0.95
TPM3-220ENST00000509601 CDK7P50613 346 aa20.97■□□□□ 0.95
TPM3-220ENST00000509601 CDC37Q16543 378 aaPredicted RBP20.97■□□□□ 0.95
TPM3-220ENST00000509601 IFIT1BQ5T764 474 aaKnown RBP20.97■□□□□ 0.95
TPM3-220ENST00000509601 STOX1Q6ZVD7 989 aa20.97■□□□□ 0.95
TPM3-220ENST00000509601 FBXO16Q8IX29 292 aaPredicted RBP20.97■□□□□ 0.95
TPM3-220ENST00000509601 TOX2Q96NM4 488 aa20.97■□□□□ 0.95
TPM3-220ENST00000509601 SPC25Q9HBM1 224 aa20.97■□□□□ 0.95
TPM3-220ENST00000509601 VAT1LQ9HCJ6 419 aa20.97■□□□□ 0.95
TPM3-220ENST00000509601 PRDM5Q9NQX1 630 aaPredicted RBP20.97■□□□□ 0.95
TPM3-220ENST00000509601 ELP1O95163 1332 aa20.97■□□□□ 0.95
TPM3-220ENST00000509601 LOC102724159A0A0B4J2E5 919 aa20.96■□□□□ 0.95
TPM3-220ENST00000509601 E7EWF7 191 aa20.96■□□□□ 0.95
TPM3-220ENST00000509601 DYNC1LI2O43237 492 aaPredicted RBP20.96■□□□□ 0.95
TPM3-220ENST00000509601 BEX3Q00994 111 aa20.96■□□□□ 0.95
TPM3-220ENST00000509601 TRDNQ13061 729 aa20.96■□□□□ 0.95
TPM3-220ENST00000509601 PWP2Q15269 919 aaKnown RBP20.96■□□□□ 0.95
TPM3-220ENST00000509601 USH1GQ495M9 461 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms