RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 P2RX7Q99572 595 aaKnown RBP12.59□□□□□ -0.39
PROM1-207ENST00000508167 SPZ1Q9BXG8 430 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 PNMA6FA0A0J9YX94 578 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 ESPNB1AK53 854 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 PRPF3O43395 683 aaKnown RBP12.59□□□□□ -0.39
PROM1-207ENST00000508167 FUT2Q10981 343 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 HS1BP3Q53T59 392 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 PARK7Q99497 189 aaKnown RBP12.59□□□□□ -0.39
PROM1-207ENST00000508167 PPP1R9AQ9ULJ8 1098 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 KCNJ14Q9UNX9 436 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 KCNH4Q9UQ05 1017 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 BTBD19C9JJ37 291 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 CATSPERGQ6ZRH7 1159 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 FBXO18Q8NFZ0 1043 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 BRI3BPQ8WY22 251 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 CLSTN2Q9H4D0 955 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 AOC2O75106 756 aa12.58□□□□□ -0.4
PROM1-207ENST00000508167 CFBP00751 764 aa12.58□□□□□ -0.4
PROM1-207ENST00000508167 SNRNP48Q6IEG0 339 aaKnown RBP12.58□□□□□ -0.4
PROM1-207ENST00000508167 C6orf50Q9HD87 102 aa12.58□□□□□ -0.4
PROM1-207ENST00000508167 SNHG28P0DPA3 235 aa12.58□□□□□ -0.4
PROM1-207ENST00000508167 SCAND2PQ9GZW5 306 aaPredicted RBP12.58□□□□□ -0.4
PROM1-207ENST00000508167 SLC10A3P09131 477 aa12.58□□□□□ -0.4
PROM1-207ENST00000508167 INHBEP58166 350 aa12.58□□□□□ -0.4
PROM1-207ENST00000508167 HERVK_113P62684 666 aa12.58□□□□□ -0.4
PROM1-207ENST00000508167 CNTNAP5Q8WYK1 1306 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 CYTH3O43739 400 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 STAT3P40763 770 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 NOVP48745 357 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 SH3D19Q5HYK7 790 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 AXDND1Q5T1B0 1012 aaPredicted RBP12.57□□□□□ -0.4
PROM1-207ENST00000508167 FCHSD1Q86WN1 690 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 C12orf42Q96LP6 360 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 RTEL1Q9NZ71 1219 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 NOL7Q9UMY1 257 aaKnown RBP12.57□□□□□ -0.4
PROM1-207ENST00000508167 IVNS1ABPQ9Y6Y0 642 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 SMCO2A6NFE2 343 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 GNA11P29992 359 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 DSG3P32926 999 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 PTPAQ15257 358 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 ANKRD13CQ8N6S4 541 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 DACT1Q9NYF0 836 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 CLIC4Q9Y696 253 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 MRPL12P52815 198 aaKnown RBP12.57□□□□□ -0.4
PROM1-207ENST00000508167 CCNA1P78396 465 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 SPATA32Q96LK8 384 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 AGBL1Q96MI9 1066 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 ZFYVE28Q9HCC9 887 aa12.57□□□□□ -0.4
PROM1-207ENST00000508167 MRPL11Q9Y3B7 192 aaKnown RBP12.57□□□□□ -0.4
PROM1-207ENST00000508167 STK36Q9NRP7 1315 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 CALML3P27482 149 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 KRT40Q6A162 431 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 RIOX1Q9H6W3 641 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 CCDC194A0A1B0GVG4 234 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 MARCH6O60337 910 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 FDX1P10109 184 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 PFKFB3Q16875 520 aaPredicted RBP12.56□□□□□ -0.4
PROM1-207ENST00000508167 FMR1NBQ8N0W7 255 aaPredicted RBP12.56□□□□□ -0.4
PROM1-207ENST00000508167 LINC00301Q8NCQ3 95 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 PSTPIP2Q9H939 334 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 CPA4Q9UI42 421 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 VWA5AO00534 786 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 TAL1P17542 331 aaPredicted RBP12.56□□□□□ -0.4
PROM1-207ENST00000508167 U2AF2P26368 475 aaKnown RBP eCLIP12.56□□□□□ -0.46e-6■■■■□ 22.5
PROM1-207ENST00000508167 ADCY7P51828 1080 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 ANKRD35Q8N283 1001 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 TEX13BQ9BXU2 312 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 PAPPA2Q9BXP8 1791 aa12.56□□□□□ -0.4
PROM1-207ENST00000508167 SMARCA1P28370 1054 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 UVSSAQ2YD98 709 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 WWC2Q6AWC2 1192 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 FAM237AA0A1B0GTK4 181 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
PROM1-207ENST00000508167 PEX10O60683 326 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 TRPA1O75762 1119 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 C1QTNF8P60827 252 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 JAKMIP3Q5VZ66 844 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 RNF146Q9NTX7 359 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 POLR3EQ9NVU0 708 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 PNMA2Q9UL42 364 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 SPDYE3A6NKU9 549 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 NPY5RQ15761 445 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 ANKRD23Q86SG2 305 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 MB21D1Q8N884 522 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 PCDHA7Q9UN72 937 aa12.55□□□□□ -0.4
PROM1-207ENST00000508167 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
PROM1-207ENST00000508167 KRT2P35908 639 aa12.54□□□□□ -0.4
PROM1-207ENST00000508167 ATL3Q6DD88 541 aa12.54□□□□□ -0.4
PROM1-207ENST00000508167 DIS3L2Q8IYB7 885 aaKnown RBP12.54□□□□□ -0.4
PROM1-207ENST00000508167 BICD2Q8TD16 824 aa12.54□□□□□ -0.4
PROM1-207ENST00000508167 SYAP1Q96A49 352 aaPredicted RBP12.54□□□□□ -0.4
PROM1-207ENST00000508167 ZIC5Q96T25 663 aa12.54□□□□□ -0.4
PROM1-207ENST00000508167 BIN2Q9UBW5 565 aaPredicted RBP12.54□□□□□ -0.4
PROM1-207ENST00000508167 IQCB1Q15051 598 aa12.54□□□□□ -0.4
PROM1-207ENST00000508167 BTNL9Q6UXG8 535 aa12.54□□□□□ -0.4
PROM1-207ENST00000508167 GPRC5AQ8NFJ5 357 aa12.54□□□□□ -0.4
PROM1-207ENST00000508167 ZNF500O60304 480 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms