RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 IPO7O95373 1038 aaKnown RBP14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 UBA7P41226 1012 aa14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 INF2Q27J81 1249 aa14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 MIIPQ5JXC2 388 aa14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 SND1Q7KZF4 910 aaKnown RBP eCLIP14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 STAG2Q8N3U4 1231 aa14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 FAM76AQ8TAV0 307 aa14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 LRRC1Q9BTT6 524 aa14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 PCDHA4Q9UN74 947 aa14.99□□□□□ -0.01
SNCAIP-209ENST00000508017 GOLGA6CA6NDK9 693 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 ORC4O43929 436 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 GOLGA6DP0CG33 693 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 CALML3P27482 149 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 MTIF2P46199 727 aaKnown RBP14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 VAV2P52735 878 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 SLC7A5Q01650 507 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 KIF5AQ12840 1032 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 CCDC170Q8IYT3 715 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 HPS3Q969F9 1004 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 PSMB7Q99436 277 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 GOLGA6AQ9NYA3 693 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 EHD2Q9NZN4 543 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 SNX12Q9UMY4 172 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 LAMB1P07942 1786 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 XIRP1Q702N8 1843 aaKnown RBP14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 NTSR2O95665 410 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 FCER1AP12319 257 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 MATR3P43243 847 aaKnown RBP eCLIP14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 STK4Q13043 487 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 CCDC96Q2M329 555 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 CCDC178Q5BJE1 867 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 DNAJC21Q5F1R6 531 aaKnown RBP14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 P2RX5Q93086 422 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 DCP1AQ9NPI6 582 aaPredicted RBP14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 FAM184BQ9ULE4 1060 aa14.98□□□□□ -0.01
SNCAIP-209ENST00000508017 CCDC194A0A1B0GVG4 234 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 TSPY2A6NKD2 308 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 NUTM2BA6NNL0 878 aaPredicted RBP14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 NUTM2EB1AL46 878 aaPredicted RBP14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 M0R2N6 131 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 MOCS3O95396 460 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 PCP11498 1178 aaKnown RBP14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 PLCG1P19174 1290 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 IRAK1P51617 712 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 PDE4DQ08499 809 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 SLC35G1Q2M3R5 365 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 INTS5Q6P9B9 1019 aaKnown RBP14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 CERS3Q8IU89 383 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 PPM1EQ8WY54 764 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 NOC4LQ9BVI4 516 aaKnown RBP14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 NUP58Q9BVL2 599 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 PCDHA6Q9UN73 950 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 NIP7Q9Y221 180 aaKnown RBP eCLIP14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 PCDHA8Q9Y5H6 950 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 RREB1Q92766 1687 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 EPHB6O15197 1021 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 CCNE1P24864 410 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 CXCR5P32302 372 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 CCT5P48643 541 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 TTC19Q6DKK2 380 aaPredicted RBP14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 NFRKBQ6P4R8 1299 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 C3orf67Q6ZVT6 689 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 NOC3LQ8WTT2 800 aaKnown RBP14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 DHTKD1Q96HY7 919 aaPredicted RBP14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 CCDC42Q96M95 316 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 ARHGAP20Q9P2F6 1191 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 MTMR7Q9Y216 660 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 SCN7AQ01118 1682 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 FLT1P17948 1338 aa14.97□□□□□ -0.01
SNCAIP-209ENST00000508017 KLRK1P26718 216 aa14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 MMGT1Q8N4V1 131 aa14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 RETREG2Q8NC44 543 aa14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 NSUN4Q96CB9 384 aaKnown RBP14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 CCSER1Q9C0I3 900 aa14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 CAMTA2O94983 1202 aa14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 MECOMQ03112 1051 aa14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 FKBP15Q5T1M5 1219 aa14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 FNBP4Q8N3X1 1017 aaPredicted RBP14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 TSEN2Q8NCE0 465 aaKnown RBP14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 SPATA4Q8NEY3 305 aa14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 FAM84BQ96KN1 310 aaPredicted RBP14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 SH2D4AQ9H788 454 aa14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 PCDHA13Q9Y5I0 950 aa14.96□□□□□ -0.01
SNCAIP-209ENST00000508017 KIAA1551Q9HCM1 1747 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 EXOC5O00471 708 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 NCK2O43639 380 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 KIF5BP33176 963 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 SPA17Q15506 151 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 C2CD5Q86YS7 1000 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 IFIH1Q9BYX4 1025 aaKnown RBP14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 TRIM9Q9C026 710 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 JRKLQ9Y4A0 524 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 GRIN2DO15399 1336 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 LAMB2P55268 1798 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 CASZ1Q86V15 1759 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 A0A0G2JS52 829 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 ASIC1P78348 528 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 TXNRD1Q16881 649 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 ICE2Q659A1 982 aa14.95□□□□□ -0.02
SNCAIP-209ENST00000508017 IQCEQ6IPM2 695 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms