RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 ACVR2BQ13705 512 aa18.13■□□□□ 0.49
MED28-204ENST00000506409 USH1GQ495M9 461 aa18.13■□□□□ 0.49
MED28-204ENST00000506409 GJC2Q5T442 439 aaPredicted RBP18.13■□□□□ 0.49
MED28-204ENST00000506409 RNF20Q5VTR2 975 aa18.13■□□□□ 0.49
MED28-204ENST00000506409 ERICH6BQ5W0A0 696 aa18.13■□□□□ 0.49
MED28-204ENST00000506409 STAG2Q8N3U4 1231 aa18.13■□□□□ 0.49
MED28-204ENST00000506409 ABHD16BQ9H3Z7 469 aa18.13■□□□□ 0.49
MED28-204ENST00000506409 SENP2Q9HC62 589 aa18.13■□□□□ 0.49
MED28-204ENST00000506409 PPP4R2Q9NY27 417 aa18.13■□□□□ 0.49
MED28-204ENST00000506409 CEP290O15078 2479 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 PTPDC1A2A3K4 754 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 ASB14A6NK59 587 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 KBTBD13C9JR72 458 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 KLRF2D3W0D1 207 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 MCM5P33992 734 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 BAATQ14032 418 aaPredicted RBP18.12■□□□□ 0.49
MED28-204ENST00000506409 CATIPQ7Z7H3 387 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 IGDCC4Q8TDY8 1250 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 CLEC4DQ8WXI8 215 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 VAT1LQ9HCJ6 419 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 XPNPEP3Q9NQH7 507 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 MAD2L2Q9UI95 211 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 FAM184BQ9ULE4 1060 aa18.12■□□□□ 0.49
MED28-204ENST00000506409 MCM3APO60318 1980 aa18.11■□□□□ 0.49
MED28-204ENST00000506409 PALM3A6NDB9 673 aaPredicted RBP18.11■□□□□ 0.49
MED28-204ENST00000506409 PRC1O43663 620 aa18.11■□□□□ 0.49
MED28-204ENST00000506409 GRM4Q14833 912 aa18.11■□□□□ 0.49
MED28-204ENST00000506409 QRICH1Q2TAL8 776 aa18.11■□□□□ 0.49
MED28-204ENST00000506409 RNF207Q6ZRF8 634 aa18.11■□□□□ 0.49
MED28-204ENST00000506409 LENG1Q96BZ8 264 aaPredicted RBP18.11■□□□□ 0.49
MED28-204ENST00000506409 MTA3Q9BTC8 594 aa18.11■□□□□ 0.49
MED28-204ENST00000506409 SENP6Q9GZR1 1112 aaPredicted RBP18.11■□□□□ 0.49
MED28-204ENST00000506409 JMJD4Q9H9V9 463 aa18.11■□□□□ 0.49
MED28-204ENST00000506409 ASTN1O14525 1302 aa18.11■□□□□ 0.49
MED28-204ENST00000506409 CALML3P27482 149 aa18.1■□□□□ 0.49
MED28-204ENST00000506409 TROAPQ12815 778 aa18.1■□□□□ 0.49
MED28-204ENST00000506409 LRRC41Q15345 812 aa18.1■□□□□ 0.49
MED28-204ENST00000506409 SLC30A10Q6XR72 485 aa18.1■□□□□ 0.49
MED28-204ENST00000506409 C7orf61Q8IZ16 206 aa18.1■□□□□ 0.49
MED28-204ENST00000506409 PURBQ96QR8 312 aaKnown RBP18.1■□□□□ 0.49
MED28-204ENST00000506409 LY9Q9HBG7 655 aa18.1■□□□□ 0.49
MED28-204ENST00000506409 ADD3Q9UEY8 706 aaKnown RBP18.1■□□□□ 0.49
MED28-204ENST00000506409 ALPK3Q96L96 1907 aa18.1■□□□□ 0.49
MED28-204ENST00000506409 ABCB11O95342 1321 aa18.09■□□□□ 0.49
MED28-204ENST00000506409 PGK1P00558 417 aa18.09■□□□□ 0.49
MED28-204ENST00000506409 RPS6P62753 249 aaKnown RBP18.09■□□□□ 0.49
MED28-204ENST00000506409 CCDC144BQ3MJ40 725 aa18.09■□□□□ 0.49
MED28-204ENST00000506409 RNF180Q86T96 592 aa18.09■□□□□ 0.49
MED28-204ENST00000506409 FBXO11Q86XK2 927 aa18.09■□□□□ 0.49
MED28-204ENST00000506409 NUP133Q8WUM0 1156 aa18.09■□□□□ 0.49
MED28-204ENST00000506409 TMEM87BQ96K49 555 aa18.09■□□□□ 0.49
MED28-204ENST00000506409 KATNBL1Q9H079 304 aa18.09■□□□□ 0.49
MED28-204ENST00000506409 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
MED28-204ENST00000506409 LCTP09848 1927 aa18.08■□□□□ 0.49
MED28-204ENST00000506409 SH2B2O14492 632 aaPredicted RBP18.08■□□□□ 0.48
MED28-204ENST00000506409 ALDH5A1P51649 535 aaPredicted RBP18.08■□□□□ 0.48
MED28-204ENST00000506409 COL9A3Q14050 684 aaPredicted RBP18.08■□□□□ 0.48
MED28-204ENST00000506409 LRRC26Q2I0M4 334 aa18.08■□□□□ 0.48
MED28-204ENST00000506409 NFXL1Q6ZNB6 911 aa18.08■□□□□ 0.48
MED28-204ENST00000506409 ZNF654Q8IZM8 581 aa18.08■□□□□ 0.48
MED28-204ENST00000506409 TMTC2Q8N394 836 aa18.08■□□□□ 0.48
MED28-204ENST00000506409 DDX49Q9Y6V7 483 aaKnown RBP18.08■□□□□ 0.48
MED28-204ENST00000506409 SYNRGQ9UMZ2 1314 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 CCDC69A6NI79 296 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 ZBTB5O15062 677 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 ADAMTS4O75173 837 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 DUSP11O75319 330 aaKnown RBP18.07■□□□□ 0.48
MED28-204ENST00000506409 DDAH1O94760 285 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 ATN1P54259 1190 aaPredicted RBP18.07■□□□□ 0.48
MED28-204ENST00000506409 EEPD1Q7L9B9 569 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 HOMER1Q86YM7 354 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 RGS22Q8NE09 1264 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 MTMR8Q96EF0 704 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 NEK1Q96PY6 1258 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 AMNQ9BXJ7 453 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 MRPL11Q9Y3B7 192 aaKnown RBP18.07■□□□□ 0.48
MED28-204ENST00000506409 MYH6P13533 1939 aa18.07■□□□□ 0.48
MED28-204ENST00000506409 LOC102724159A0A0B4J2E5 919 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 ADCY6O43306 1168 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 KIF5BP33176 963 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 ADCYAP1R1P41586 468 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 LIFRP42702 1097 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 PWP2Q15269 919 aaKnown RBP18.06■□□□□ 0.48
MED28-204ENST00000506409 MCF2L2Q86YR7 1114 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 FBXO16Q8IX29 292 aaPredicted RBP18.06■□□□□ 0.48
MED28-204ENST00000506409 RASEFQ8IZ41 740 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 CTCFLQ8NI51 663 aaPredicted RBP18.06■□□□□ 0.48
MED28-204ENST00000506409 MORC4Q8TE76 937 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 MPHOSPH6Q99547 160 aaKnown RBP18.06■□□□□ 0.48
MED28-204ENST00000506409 MAP3K14Q99558 947 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 MYL10Q9BUA6 226 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 LRRC2Q9BYS8 371 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 MAF1Q9H063 256 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 RIOX1Q9H6W3 641 aa18.06■□□□□ 0.48
MED28-204ENST00000506409 TNFAIP2Q03169 654 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 KRT32Q14532 448 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 SLC35G1Q2M3R5 365 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 TSGA10IPQ3SY00 556 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 NOL8Q76FK4 1167 aaKnown RBP18.05■□□□□ 0.48
MED28-204ENST00000506409 DNERQ8NFT8 737 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms