RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 SYNE3Q6ZMZ3 975 aa23.5■■□□□ 1.35
HERC6-205ENST00000504905 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.5■■□□□ 1.35
HERC6-205ENST00000504905 NPLOC4Q8TAT6 608 aa23.5■■□□□ 1.35
HERC6-205ENST00000504905 DDX11Q96FC9 970 aa23.5■■□□□ 1.35
HERC6-205ENST00000504905 PGK2P07205 417 aa23.49■■□□□ 1.35
HERC6-205ENST00000504905 RPS6KB1P23443 525 aa23.49■■□□□ 1.35
HERC6-205ENST00000504905 ANKRD35Q8N283 1001 aa23.49■■□□□ 1.35
HERC6-205ENST00000504905 JMJD4Q9H9V9 463 aa23.49■■□□□ 1.35
HERC6-205ENST00000504905 PAK6Q9NQU5 681 aaPredicted RBP23.49■■□□□ 1.35
HERC6-205ENST00000504905 EVI5O60447 810 aa23.48■■□□□ 1.35
HERC6-205ENST00000504905 TFRCP02786 760 aaKnown RBP23.48■■□□□ 1.35
HERC6-205ENST00000504905 TAL1P17542 331 aaPredicted RBP23.48■■□□□ 1.35
HERC6-205ENST00000504905 CRISPLD2Q9H0B8 497 aa23.48■■□□□ 1.35
HERC6-205ENST00000504905 BAZ2BQ9UIF8 2168 aaKnown RBP23.47■■□□□ 1.35
HERC6-205ENST00000504905 RXRAP19793 462 aa23.47■■□□□ 1.35
HERC6-205ENST00000504905 TRIM32Q13049 653 aa23.47■■□□□ 1.35
HERC6-205ENST00000504905 C8orf34Q49A92 452 aa23.47■■□□□ 1.35
HERC6-205ENST00000504905 MUM1L1Q5H9M0 696 aa23.47■■□□□ 1.35
HERC6-205ENST00000504905 MFSD14CQ5VZR4 134 aa23.47■■□□□ 1.35
HERC6-205ENST00000504905 Q6ZUG5 572 aa23.47■■□□□ 1.35
HERC6-205ENST00000504905 MICU3Q86XE3 530 aa23.47■■□□□ 1.35
HERC6-205ENST00000504905 RAB11FIP4Q86YS3 637 aa23.47■■□□□ 1.35
HERC6-205ENST00000504905 DEFB118Q96PH6 123 aa23.47■■□□□ 1.35
HERC6-205ENST00000504905 FLRT1Q9NZU1 646 aa23.47■■□□□ 1.35
HERC6-205ENST00000504905 SEC24BO95487 1268 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 GNAQP50148 359 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 QRICH1Q2TAL8 776 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 USH1GQ495M9 461 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 OLFML2BQ68BL8 750 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 APOA5Q6Q788 366 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 RUFY3Q7L099 469 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 CCDC144CPQ8IYA2 1237 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 TM6SF1Q9BZW5 370 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 RIOX1Q9H6W3 641 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 ZSWIM6Q9HCJ5 1215 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 DIS3Q9Y2L1 958 aaKnown RBP23.46■■□□□ 1.35
HERC6-205ENST00000504905 CYP46A1Q9Y6A2 500 aa23.46■■□□□ 1.35
HERC6-205ENST00000504905 PFASO15067 1338 aa23.45■■□□□ 1.34
HERC6-205ENST00000504905 KLF18A0A0U1RQI7 1052 aa23.45■■□□□ 1.34
HERC6-205ENST00000504905 PRKAR2AP13861 404 aaKnown RBP23.45■■□□□ 1.34
HERC6-205ENST00000504905 ZNF792Q3KQV3 632 aa23.45■■□□□ 1.34
HERC6-205ENST00000504905 FBXO11Q86XK2 927 aa23.45■■□□□ 1.34
HERC6-205ENST00000504905 MTMR8Q96EF0 704 aa23.45■■□□□ 1.34
HERC6-205ENST00000504905 MAML3Q96JK9 1138 aa23.45■■□□□ 1.34
HERC6-205ENST00000504905 LZTS2Q9BRK4 669 aa23.45■■□□□ 1.34
HERC6-205ENST00000504905 A1CFQ9NQ94 594 aaKnown RBP23.45■■□□□ 1.34
HERC6-205ENST00000504905 BRPF3Q9ULD4 1205 aa23.45■■□□□ 1.34
HERC6-205ENST00000504905 NAP1L2Q9ULW6 460 aaPredicted RBP23.45■■□□□ 1.34
HERC6-205ENST00000504905 DNAJC25-GNG10A0A024R161 153 aa23.44■■□□□ 1.34
HERC6-205ENST00000504905 ZBTB43O43298 467 aa23.44■■□□□ 1.34
HERC6-205ENST00000504905 ANAPC15P60006 121 aa23.44■■□□□ 1.34
HERC6-205ENST00000504905 CACNB2Q08289 660 aaPredicted RBP23.44■■□□□ 1.34
HERC6-205ENST00000504905 SLC35G1Q2M3R5 365 aa23.44■■□□□ 1.34
HERC6-205ENST00000504905 NSMFQ6X4W1 530 aa23.44■■□□□ 1.34
HERC6-205ENST00000504905 HOMER1Q86YM7 354 aa23.44■■□□□ 1.34
HERC6-205ENST00000504905 FANCBQ8NB91 859 aa23.44■■□□□ 1.34
HERC6-205ENST00000504905 BRF1Q92994 677 aa23.44■■□□□ 1.34
HERC6-205ENST00000504905 HMX1Q9NP08 348 aaPredicted RBP23.44■■□□□ 1.34
HERC6-205ENST00000504905 ABCB11O95342 1321 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 RPTORQ8N122 1335 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 ZBTB5O15062 677 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 CYTH3O43739 400 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 CYP2C19P33261 490 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 APOBRQ0VD83 1088 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 MAP3K21Q5TCX8 1036 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 FBXL16Q8N461 479 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 PIGSQ96S52 555 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 SPZ1Q9BXG8 430 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 AMNQ9BXJ7 453 aa23.43■■□□□ 1.34
HERC6-205ENST00000504905 POTEB2H3BUK9 544 aa23.42■■□□□ 1.34
HERC6-205ENST00000504905 NFIBO00712 420 aa23.42■■□□□ 1.34
HERC6-205ENST00000504905 PLEKHA8P1O95397 391 aa23.42■■□□□ 1.34
HERC6-205ENST00000504905 SMARCA1P28370 1054 aa23.42■■□□□ 1.34
HERC6-205ENST00000504905 CLEC4DQ8WXI8 215 aa23.42■■□□□ 1.34
HERC6-205ENST00000504905 PAWRQ96IZ0 340 aaKnown RBP23.42■■□□□ 1.34
HERC6-205ENST00000504905 UPF3BQ9BZI7 483 aaKnown RBP23.42■■□□□ 1.34
HERC6-205ENST00000504905 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.42■■□□□ 1.34
HERC6-205ENST00000504905 RBM28Q9NW13 759 aaKnown RBP23.42■■□□□ 1.34
HERC6-205ENST00000504905 CYP39A1Q9NYL5 469 aa23.42■■□□□ 1.34
HERC6-205ENST00000504905 GOLGA8AA7E2F4 631 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 GOLGA8BA8MQT2 603 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 SOX1O00570 391 aaPredicted RBP23.41■■□□□ 1.34
HERC6-205ENST00000504905 IGHA2P01877 340 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 RCAN1P53805 252 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 RTN1Q16799 776 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 NECAB2Q7Z6G3 386 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 SRBD1Q8N5C6 995 aaKnown RBP23.41■■□□□ 1.34
HERC6-205ENST00000504905 SLC17A8Q8NDX2 589 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 PIBF1Q8WXW3 757 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 TINF2Q9BSI4 451 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 AGXT2Q9BYV1 514 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 MRPL11Q9Y3B7 192 aaKnown RBP23.41■■□□□ 1.34
HERC6-205ENST00000504905 COL6A3P12111 3177 aa23.41■■□□□ 1.34
HERC6-205ENST00000504905 LAMA3Q16787 3333 aa23.4■■□□□ 1.34
HERC6-205ENST00000504905 LCTP09848 1927 aa23.4■■□□□ 1.34
HERC6-205ENST00000504905 PNMA6FA0A0J9YX94 578 aa23.4■■□□□ 1.34
HERC6-205ENST00000504905 PTPDC1A2A3K4 754 aa23.4■■□□□ 1.34
HERC6-205ENST00000504905 CNTN2Q02246 1040 aa23.4■■□□□ 1.34
HERC6-205ENST00000504905 TRAF1Q13077 416 aa23.4■■□□□ 1.34
HERC6-205ENST00000504905 BAATQ14032 418 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms