RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 PHF24Q9UPV7 400 aa29.68■■■□□ 2.34
PVT1-201ENST00000504719 DNAH12Q6ZR08 3092 aa29.68■■■□□ 2.34
PVT1-201ENST00000504719 RTP1P59025 263 aa29.67■■■□□ 2.34
PVT1-201ENST00000504719 UBA5Q9GZZ9 404 aa29.67■■■□□ 2.34
PVT1-201ENST00000504719 ASTN1O14525 1302 aa29.67■■■□□ 2.34
PVT1-201ENST00000504719 WDR19Q8NEZ3 1342 aa29.67■■■□□ 2.34
PVT1-201ENST00000504719 LRRC37A2A6NM11 1700 aa29.66■■■□□ 2.34
PVT1-201ENST00000504719 DUSP11O75319 330 aaKnown RBP29.66■■■□□ 2.34
PVT1-201ENST00000504719 BMP8BP34820 402 aa29.66■■■□□ 2.34
PVT1-201ENST00000504719 TRDNQ13061 729 aa29.66■■■□□ 2.34
PVT1-201ENST00000504719 SNX17Q15036 470 aa29.66■■■□□ 2.34
PVT1-201ENST00000504719 SEC23AQ15436 765 aa29.66■■■□□ 2.34
PVT1-201ENST00000504719 CCDC144BQ3MJ40 725 aa29.66■■■□□ 2.34
PVT1-201ENST00000504719 IFIT1BQ5T764 474 aaKnown RBP29.66■■■□□ 2.34
PVT1-201ENST00000504719 MAP4K1Q92918 833 aa29.66■■■□□ 2.34
PVT1-201ENST00000504719 FERMT2Q96AC1 680 aa29.66■■■□□ 2.34
PVT1-201ENST00000504719 CPVLQ9H3G5 476 aa29.66■■■□□ 2.34
PVT1-201ENST00000504719 SYNRGQ9UMZ2 1314 aa29.66■■■□□ 2.34
PVT1-201ENST00000504719 MYH6P13533 1939 aa29.65■■■□□ 2.34
PVT1-201ENST00000504719 A0A1W2PPC1 479 aa29.65■■■□□ 2.34
PVT1-201ENST00000504719 NFIBO00712 420 aa29.65■■■□□ 2.34
PVT1-201ENST00000504719 ADCY6O43306 1168 aa29.65■■■□□ 2.34
PVT1-201ENST00000504719 BAATQ14032 418 aaPredicted RBP29.65■■■□□ 2.34
PVT1-201ENST00000504719 ASPRV1Q53RT3 343 aa29.65■■■□□ 2.34
PVT1-201ENST00000504719 KLHDC9Q8NEP7 349 aa29.65■■■□□ 2.34
PVT1-201ENST00000504719 CLEC4DQ8WXI8 215 aa29.65■■■□□ 2.34
PVT1-201ENST00000504719 ESYT1Q9BSJ8 1104 aa29.65■■■□□ 2.34
PVT1-201ENST00000504719 MAGEA10P43363 369 aaPredicted RBP29.64■■■□□ 2.34
PVT1-201ENST00000504719 PURBQ96QR8 312 aaKnown RBP29.64■■■□□ 2.34
PVT1-201ENST00000504719 TSEN34Q9BSV6 310 aaKnown RBP29.64■■■□□ 2.34
PVT1-201ENST00000504719 TAF6LQ9Y6J9 622 aa29.64■■■□□ 2.34
PVT1-201ENST00000504719 C1orf53Q5VUE5 145 aa29.63■■■□□ 2.33
PVT1-201ENST00000504719 ATP11BQ9Y2G3 1177 aa29.63■■■□□ 2.33
PVT1-201ENST00000504719 E7EWF7 191 aa29.62■■■□□ 2.33
PVT1-201ENST00000504719 PARP1P09874 1014 aaKnown RBP29.62■■■□□ 2.33
PVT1-201ENST00000504719 ADGRF4Q8IZF3 695 aa29.62■■■□□ 2.33
PVT1-201ENST00000504719 MORC4Q8TE76 937 aa29.62■■■□□ 2.33
PVT1-201ENST00000504719 PCDH10Q9P2E7 1040 aa29.62■■■□□ 2.33
PVT1-201ENST00000504719 RANBP2P49792 3224 aaKnown RBP29.62■■■□□ 2.33
PVT1-201ENST00000504719 PTPDC1A2A3K4 754 aa29.61■■■□□ 2.33
PVT1-201ENST00000504719 CDC45O75419 566 aa29.61■■■□□ 2.33
PVT1-201ENST00000504719 CDC37Q16543 378 aaPredicted RBP29.61■■■□□ 2.33
PVT1-201ENST00000504719 CCSAPQ6IQ19 270 aaPredicted RBP29.61■■■□□ 2.33
PVT1-201ENST00000504719 KIAA1211Q6ZU35 1233 aa29.61■■■□□ 2.33
PVT1-201ENST00000504719 STOX1Q6ZVD7 989 aa29.61■■■□□ 2.33
PVT1-201ENST00000504719 NCOA7Q8NI08 942 aa29.61■■■□□ 2.33
PVT1-201ENST00000504719 UPF3AQ9H1J1 476 aaKnown RBP29.61■■■□□ 2.33
PVT1-201ENST00000504719 RBM8AQ9Y5S9 174 aaKnown RBP29.61■■■□□ 2.33
PVT1-201ENST00000504719 DDX49Q9Y6V7 483 aaKnown RBP29.61■■■□□ 2.33
PVT1-201ENST00000504719 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.6■■■□□ 2.33
PVT1-201ENST00000504719 A0A1W2PQ45 241 aaPredicted RBP29.6■■■□□ 2.33
PVT1-201ENST00000504719 A0A1W2PQY0 241 aa29.6■■■□□ 2.33
PVT1-201ENST00000504719 MYADML2A6NDP7 307 aa29.6■■■□□ 2.33
PVT1-201ENST00000504719 CST5P28325 142 aaPredicted RBP29.6■■■□□ 2.33
PVT1-201ENST00000504719 GJA9P57773 515 aa29.6■■■□□ 2.33
PVT1-201ENST00000504719 KCNA10Q16322 511 aa29.6■■■□□ 2.33
PVT1-201ENST00000504719 TRIM60Q495X7 471 aa29.6■■■□□ 2.33
PVT1-201ENST00000504719 CASC1Q6TDU7 716 aa29.6■■■□□ 2.33
PVT1-201ENST00000504719 RNF207Q6ZRF8 634 aa29.6■■■□□ 2.33
PVT1-201ENST00000504719 ADD3Q9UEY8 706 aaKnown RBP29.6■■■□□ 2.33
PVT1-201ENST00000504719 MOXD2PA6NHM9 499 aa29.59■■■□□ 2.33
PVT1-201ENST00000504719 ALDH5A1P51649 535 aaPredicted RBP29.59■■■□□ 2.33
PVT1-201ENST00000504719 ACLYP53396 1101 aa29.59■■■□□ 2.33
PVT1-201ENST00000504719 IRX5P78411 483 aaPredicted RBP29.59■■■□□ 2.33
PVT1-201ENST00000504719 USH1GQ495M9 461 aa29.59■■■□□ 2.33
PVT1-201ENST00000504719 SLC30A10Q6XR72 485 aa29.59■■■□□ 2.33
PVT1-201ENST00000504719 RALYLQ86SE5 291 aaKnown RBP29.59■■■□□ 2.33
PVT1-201ENST00000504719 LSG1Q9H089 658 aaKnown RBP29.59■■■□□ 2.33
PVT1-201ENST00000504719 SPC25Q9HBM1 224 aa29.59■■■□□ 2.33
PVT1-201ENST00000504719 LOC102724159A0A0B4J2E5 919 aa29.58■■■□□ 2.33
PVT1-201ENST00000504719 C6orf222P0C671 652 aaPredicted RBP29.58■■■□□ 2.33
PVT1-201ENST00000504719 TNFAIP2Q03169 654 aa29.58■■■□□ 2.33
PVT1-201ENST00000504719 PWP2Q15269 919 aaKnown RBP29.58■■■□□ 2.33
PVT1-201ENST00000504719 TAPT1Q6NXT6 567 aa29.58■■■□□ 2.33
PVT1-201ENST00000504719 STAG2Q8N3U4 1231 aa29.58■■■□□ 2.33
PVT1-201ENST00000504719 LTBP2Q14767 1821 aa29.57■■■□□ 2.32
PVT1-201ENST00000504719 IFIT3O14879 490 aaKnown RBP29.57■■■□□ 2.32
PVT1-201ENST00000504719 CALML3P27482 149 aa29.57■■■□□ 2.32
PVT1-201ENST00000504719 RPS6P62753 249 aaKnown RBP29.57■■■□□ 2.32
PVT1-201ENST00000504719 NKX3-2P78367 333 aa29.57■■■□□ 2.32
PVT1-201ENST00000504719 MDM2Q00987 491 aaPredicted RBP29.57■■■□□ 2.32
PVT1-201ENST00000504719 FBXO16Q8IX29 292 aaPredicted RBP29.57■■■□□ 2.32
PVT1-201ENST00000504719 RGS22Q8NE09 1264 aa29.57■■■□□ 2.32
PVT1-201ENST00000504719 JMJD4Q9H9V9 463 aa29.57■■■□□ 2.32
PVT1-201ENST00000504719 VTA1Q9NP79 307 aa29.57■■■□□ 2.32
PVT1-201ENST00000504719 ANO2Q9NQ90 1003 aa29.57■■■□□ 2.32
PVT1-201ENST00000504719 PDGFCQ9NRA1 345 aa29.57■■■□□ 2.32
PVT1-201ENST00000504719 PRKAG2Q9UGJ0 569 aa29.57■■■□□ 2.32
PVT1-201ENST00000504719 MAD2L2Q9UI95 211 aa29.57■■■□□ 2.32
PVT1-201ENST00000504719 GNEQ9Y223 722 aaKnown RBP29.57■■■□□ 2.32
PVT1-201ENST00000504719 ABCB11O95342 1321 aa29.56■■■□□ 2.32
PVT1-201ENST00000504719 ERICH2A1L162 156 aa29.56■■■□□ 2.32
PVT1-201ENST00000504719 QRICH1Q2TAL8 776 aa29.56■■■□□ 2.32
PVT1-201ENST00000504719 IQSEC1Q6DN90 963 aa29.56■■■□□ 2.32
PVT1-201ENST00000504719 EEPD1Q7L9B9 569 aa29.56■■■□□ 2.32
PVT1-201ENST00000504719 PCSK9Q8NBP7 692 aaKnown RBP29.56■■■□□ 2.32
PVT1-201ENST00000504719 NUP133Q8WUM0 1156 aa29.56■■■□□ 2.32
PVT1-201ENST00000504719 UBE2OQ9C0C9 1292 aaKnown RBP29.56■■■□□ 2.32
PVT1-201ENST00000504719 VAT1LQ9HCJ6 419 aa29.56■■■□□ 2.32
PVT1-201ENST00000504719 PALM3A6NDB9 673 aaPredicted RBP29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms