RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 GMLQ99445 158 aa6.98□□□□□ -1.29
UBE3D-205ENST00000503942 CDADC1Q9BWV3 514 aa6.98□□□□□ -1.29
UBE3D-205ENST00000503942 USP40Q9NVE5 1235 aa6.98□□□□□ -1.29
UBE3D-205ENST00000503942 AKAP8O43823 692 aaKnown RBP6.97□□□□□ -1.29
UBE3D-205ENST00000503942 MAGEA10P43363 369 aaPredicted RBP6.97□□□□□ -1.29
UBE3D-205ENST00000503942 TARBP2Q15633 366 aaKnown RBP6.97□□□□□ -1.29
UBE3D-205ENST00000503942 NT5DC1Q5TFE4 455 aa6.97□□□□□ -1.29
UBE3D-205ENST00000503942 FNIP1Q8TF40 1166 aa6.97□□□□□ -1.29
UBE3D-205ENST00000503942 GMIPQ9P107 970 aa6.97□□□□□ -1.29
UBE3D-205ENST00000503942 PLA2G1BP04054 148 aaKnown RBP6.96□□□□□ -1.3
UBE3D-205ENST00000503942 ATF4P18848 351 aaPredicted RBP6.96□□□□□ -1.3
UBE3D-205ENST00000503942 POLR2BP30876 1174 aaKnown RBP6.96□□□□□ -1.3
UBE3D-205ENST00000503942 CTSKP43235 329 aa6.96□□□□□ -1.3
UBE3D-205ENST00000503942 GNL2Q13823 731 aaKnown RBP6.96□□□□□ -1.3
UBE3D-205ENST00000503942 LSRQ86X29 649 aaPredicted RBP6.96□□□□□ -1.3
UBE3D-205ENST00000503942 ADGRG2Q8IZP9 1017 aa6.96□□□□□ -1.3
UBE3D-205ENST00000503942 SREK1Q8WXA9 508 aaKnown RBP6.96□□□□□ -1.3
UBE3D-205ENST00000503942 JMJD8Q96S16 334 aa6.96□□□□□ -1.3
UBE3D-205ENST00000503942 SPATA25Q9BR10 227 aa6.96□□□□□ -1.3
UBE3D-205ENST00000503942 LRRC3Q9BY71 257 aa6.96□□□□□ -1.3
UBE3D-205ENST00000503942 SUSD2Q9UGT4 822 aa6.96□□□□□ -1.3
UBE3D-205ENST00000503942 ROBO2Q9HCK4 1378 aa6.95□□□□□ -1.3
UBE3D-205ENST00000503942 A0A1B0GTL3 188 aa6.95□□□□□ -1.3
UBE3D-205ENST00000503942 TLR3O15455 904 aaKnown RBP6.95□□□□□ -1.3
UBE3D-205ENST00000503942 ZXDAP98168 799 aa6.95□□□□□ -1.3
UBE3D-205ENST00000503942 APOBRQ0VD83 1088 aa6.95□□□□□ -1.3
UBE3D-205ENST00000503942 CDCP2Q5VXM1 449 aa6.95□□□□□ -1.3
UBE3D-205ENST00000503942 SAPCD2Q86UD0 394 aa6.95□□□□□ -1.3
UBE3D-205ENST00000503942 FERMT3Q86UX7 667 aa6.95□□□□□ -1.3
UBE3D-205ENST00000503942 SLITRK4Q8IW52 837 aa6.95□□□□□ -1.3
UBE3D-205ENST00000503942 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
UBE3D-205ENST00000503942 SH3D21A4FU49 640 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 SRGAP3O43295 1099 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 SUV39H1O43463 412 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 CLEC3AO75596 197 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 DNAJA1P31689 397 aaKnown RBP6.94□□□□□ -1.3
UBE3D-205ENST00000503942 ADAM17P78536 824 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 HTRA3P83110 453 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 MVKQ03426 396 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 OVOS1Q6IE37 1185 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 TMEM52Q8NDY8 209 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 ZNF512BQ96KM6 892 aaPredicted RBP6.94□□□□□ -1.3
UBE3D-205ENST00000503942 GINM1Q9NU53 330 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 PMF1-BGLAPU3KQ54 211 aa6.94□□□□□ -1.3
UBE3D-205ENST00000503942 MEIS1O00470 390 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 ATE1O95260 518 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 CYBBP04839 570 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 FGRP09769 529 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 VAV1P15498 845 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 CCNFP41002 786 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 SOX9P48436 509 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 ARID5AQ03989 594 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 CWF19L2Q2TBE0 894 aaKnown RBP6.93□□□□□ -1.3
UBE3D-205ENST00000503942 SEZ6Q53EL9 994 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 MCF2L2Q86YR7 1114 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 NKD1Q969G9 470 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 GFOD1Q9NXC2 390 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 EFR3BQ9Y2G0 817 aa6.93□□□□□ -1.3
UBE3D-205ENST00000503942 MATN3O15232 486 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 DBHP09172 617 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 FOXO4P98177 505 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 DLX2Q07687 328 aaPredicted RBP6.92□□□□□ -1.3
UBE3D-205ENST00000503942 PAQR3Q6TCH7 311 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 CRTC3Q6UUV7 619 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 ZNF526Q8TF50 670 aaPredicted RBP6.92□□□□□ -1.3
UBE3D-205ENST00000503942 SEC16BQ96JE7 1060 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 SPATA32Q96LK8 384 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 DRC1Q96MC2 740 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 TANGO6Q9C0B7 1094 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 RNF38Q9H0F5 515 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 CNNM2Q9H8M5 875 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 BRMS1Q9HCU9 246 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 SMPD4Q9NXE4 827 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 PLA2G2DQ9UNK4 145 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 PCDHB14Q9Y5E9 798 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 DUSP10Q9Y6W6 482 aa6.92□□□□□ -1.3
UBE3D-205ENST00000503942 NOBOXO60393 691 aa6.91□□□□□ -1.3
UBE3D-205ENST00000503942 ITGB3P05106 788 aa6.91□□□□□ -1.3
UBE3D-205ENST00000503942 ATF2P15336 505 aa6.91□□□□□ -1.3
UBE3D-205ENST00000503942 CNR2P34972 360 aa6.91□□□□□ -1.3
UBE3D-205ENST00000503942 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
UBE3D-205ENST00000503942 SF3A1Q15459 793 aaKnown RBP6.91□□□□□ -1.3
UBE3D-205ENST00000503942 RTP2Q5QGT7 225 aa6.91□□□□□ -1.3
UBE3D-205ENST00000503942 VPS37DQ86XT2 251 aa6.91□□□□□ -1.3
UBE3D-205ENST00000503942 PRR13Q9NZ81 148 aa6.91□□□□□ -1.3
UBE3D-205ENST00000503942 USP35Q9P2H5 1018 aa6.91□□□□□ -1.3
UBE3D-205ENST00000503942 PCDHB12Q9Y5F1 795 aa6.91□□□□□ -1.3
UBE3D-205ENST00000503942 HCFC2Q9Y5Z7 792 aa6.91□□□□□ -1.3
UBE3D-205ENST00000503942 A0A1W2PQ27 194 aa6.9□□□□□ -1.3
UBE3D-205ENST00000503942 A0A1W2PQ64 194 aa6.9□□□□□ -1.3
UBE3D-205ENST00000503942 A0A1W2PQC6 194 aa6.9□□□□□ -1.3
UBE3D-205ENST00000503942 A0A1W2PQD8 194 aa6.9□□□□□ -1.3
UBE3D-205ENST00000503942 COL9A2Q14055 689 aaPredicted RBP6.9□□□□□ -1.3
UBE3D-205ENST00000503942 ATG4CQ96DT6 458 aa6.9□□□□□ -1.3
UBE3D-205ENST00000503942 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.3
UBE3D-205ENST00000503942 LNPKQ9C0E8 428 aa6.9□□□□□ -1.3
UBE3D-205ENST00000503942 MKRN2Q9H000 416 aaKnown RBP6.9□□□□□ -1.3
UBE3D-205ENST00000503942 FAN1Q9Y2M0 1017 aa6.9□□□□□ -1.3
UBE3D-205ENST00000503942 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
UBE3D-205ENST00000503942 CLCQ05315 142 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms