RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 CBX1P83916 185 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 NCBP1Q09161 790 aaKnown RBP10.12□□□□□ -0.79
FN1-227ENST00000498719 RASGRF1Q13972 1273 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 SLC39A14Q15043 492 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 NTRK3Q16288 839 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 IL31Q6EBC2 164 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 HOMER1Q86YM7 354 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 FEZ1Q99689 392 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 ZKSCAN3Q9BRR0 538 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 ARMT1Q9H993 441 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 LY9Q9HBG7 655 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 NGRNQ9NPE2 291 aaKnown RBP10.12□□□□□ -0.79
FN1-227ENST00000498719 TMEM260Q9NX78 707 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 FEZ2Q9UHY8 353 aaPredicted RBP10.12□□□□□ -0.79
FN1-227ENST00000498719 SMTNL1A8MU46 457 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 ZBTB43O43298 467 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 MBD4O95243 580 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 SSBP05455 408 aaKnown RBP eCLIP10.12□□□□□ -0.79
FN1-227ENST00000498719 ATP1A3P13637 1013 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 CMA1P23946 247 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 NCAPHQ15003 741 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 PTPN21Q16825 1174 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 CCDC92Q53HC0 331 aaPredicted RBP10.12□□□□□ -0.79
FN1-227ENST00000498719 TMEM67Q5HYA8 995 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 CEP135Q66GS9 1140 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 CCDC70Q6NSX1 233 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 SHC4Q6S5L8 630 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 SLF2Q8IX21 1173 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 CMTR1Q8N1G2 835 aaKnown RBP10.12□□□□□ -0.79
FN1-227ENST00000498719 PDCL2Q8N4E4 241 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 ANKRD7Q92527 254 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 ZSWIM5Q9P217 1185 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 BCL9O00512 1426 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 WDR19Q8NEZ3 1342 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 U2AF2P26368 475 aaKnown RBP eCLIP10.11□□□□□ -0.79
FN1-227ENST00000498719 GUCY1A2P33402 732 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 ST13P50502 369 aaKnown RBP10.11□□□□□ -0.79
FN1-227ENST00000498719 PNOCQ13519 176 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 PTPAQ15257 358 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 PUM3Q15397 648 aaKnown RBP10.11□□□□□ -0.79
FN1-227ENST00000498719 RRP12Q5JTH9 1297 aaKnown RBP10.11□□□□□ -0.79
FN1-227ENST00000498719 SPECC1Q5M775 1068 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 TMC6Q7Z403 805 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 KRT77Q7Z794 578 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 KIAA1958Q8N8K9 716 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 SPATA5Q8NB90 893 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 V9GY48 417 aaPredicted RBP10.11□□□□□ -0.79
FN1-227ENST00000498719 GOLGA8AA7E2F4 631 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 SFI1A8K8P3 1242 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 AKAP10O43572 662 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 LMNB1P20700 586 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 FGFR2P21802 821 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 MPSTP25325 297 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 IARSP41252 1262 aaKnown RBP10.11□□□□□ -0.79
FN1-227ENST00000498719 SYKP43405 635 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 NEK3P51956 506 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 NLRP12P59046 1061 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 DPY19L2Q6NUT2 758 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 KRT26Q7Z3Y9 468 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 LPIN2Q92539 896 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 MAP3K14Q99558 947 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 SLC26A6Q9BXS9 759 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 NAPBQ9H115 298 aa10.11□□□□□ -0.79
FN1-227ENST00000498719 SMIM22K7EJ46 135 aa10.1□□□□□ -0.79
FN1-227ENST00000498719 IFIT3O14879 490 aaKnown RBP10.1□□□□□ -0.79
FN1-227ENST00000498719 BCAMP50895 628 aa10.1□□□□□ -0.79
FN1-227ENST00000498719 SUSD4Q5VX71 490 aa10.1□□□□□ -0.79
FN1-227ENST00000498719 ARMCX5Q6P1M9 558 aa10.1□□□□□ -0.79
FN1-227ENST00000498719 NYAP1Q6ZVC0 841 aa10.1□□□□□ -0.79
FN1-227ENST00000498719 CCDC112Q8NEF3 446 aa10.1□□□□□ -0.79
FN1-227ENST00000498719 CFHR5Q9BXR6 569 aa10.1□□□□□ -0.79
FN1-227ENST00000498719 HSD3B7Q9H2F3 369 aa10.1□□□□□ -0.79
FN1-227ENST00000498719 TOMM22Q9NS69 142 aa10.1□□□□□ -0.79
FN1-227ENST00000498719 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.1□□□□□ -0.79
FN1-227ENST00000498719 V9GYY5 206 aaPredicted RBP10.1□□□□□ -0.79
FN1-227ENST00000498719 BAZ2BQ9UIF8 2168 aaKnown RBP10.1□□□□□ -0.79
FN1-227ENST00000498719 GSG1L2A8MUP6 293 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 FOXN1O15353 648 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 PTPN14Q15678 1187 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 C16orf86Q6ZW13 317 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 HS2ST1Q7LGA3 356 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 ZNF34Q8IZ26 560 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 CCAR2Q8N163 923 aaKnown RBP10.09□□□□□ -0.79
FN1-227ENST00000498719 LCORLQ8N3X6 602 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 MIGA1Q8NAN2 632 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 TPCN2Q8NHX9 752 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 DNAAF2Q9NVR5 837 aaKnown RBP10.09□□□□□ -0.79
FN1-227ENST00000498719 KCNJ14Q9UNX9 436 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 RABGAP1Q9Y3P9 1069 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 SLC12A7Q9Y666 1083 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 STRCQ7RTU9 1775 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 WTIPA6NIX2 430 aaPredicted RBP10.09□□□□□ -0.79
FN1-227ENST00000498719 BTBD18B2RXH4 712 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 PRRT4C9JH25 899 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 KIF3CO14782 793 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 NEMFO60524 1076 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 CDKL5O76039 1030 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 UQCRFS1P1P0C7P4 283 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 VARSP26640 1264 aaKnown RBP10.09□□□□□ -0.79
FN1-227ENST00000498719 GRIN1Q05586 938 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms