RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 STK25O00506 426 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 GJB1P08034 283 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 LIFRP42702 1097 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 SOX10P56693 466 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 CHST3Q7LGC8 479 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 DDX11Q96FC9 970 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 MAP3K14Q99558 947 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 RNF208Q9H0X6 261 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 ACAD9Q9H845 621 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 LY9Q9HBG7 655 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
HLA-B-254ENST00000497377 CCPG1Q9ULG6 757 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 RPTORQ8N122 1335 aa13.37□□□□□ -0.27
HLA-B-254ENST00000497377 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 SH2B2O14492 632 aaPredicted RBP13.36□□□□□ -0.27
HLA-B-254ENST00000497377 COBLO75128 1261 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 DDAH1O94760 285 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 GOLGA8HP0CJ92 632 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 GRM4Q14833 912 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 MTFR1Q15390 333 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 MAP3K21Q5TCX8 1036 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 DHX32Q7L7V1 743 aaKnown RBP13.36□□□□□ -0.27
HLA-B-254ENST00000497377 NPLOC4Q8TAT6 608 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 AGBL1Q96MI9 1066 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 MAF1Q9H063 256 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 RNF146Q9NTX7 359 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 PFASO15067 1338 aa13.36□□□□□ -0.27
HLA-B-254ENST00000497377 DNAJC25-GNG10A0A024R161 153 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 PALM3A6NDB9 673 aaPredicted RBP13.35□□□□□ -0.27
HLA-B-254ENST00000497377 CCDC69A6NI79 296 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 IGHA2P01877 340 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 CALM1P0DP23 149 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 CALM2P0DP24 149 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 CALM3P0DP25 149 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 ALAS1P13196 640 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 KIF5BP33176 963 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 GJA8P48165 433 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 TROAPQ12815 778 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 CCL14Q16627 93 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 ZNF792Q3KQV3 632 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 NFXL1Q6ZNB6 911 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 ADGRF4Q8IZF3 695 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 ZNF654Q8IZM8 581 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 ANKRD35Q8N283 1001 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 MSL3Q8N5Y2 521 aaKnown RBP13.35□□□□□ -0.27
HLA-B-254ENST00000497377 MAML3Q96JK9 1138 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 TRERF1Q96PN7 1200 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 UBA5Q9GZZ9 404 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 UNC93B1Q9H1C4 597 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 PAK6Q9NQU5 681 aaPredicted RBP13.35□□□□□ -0.27
HLA-B-254ENST00000497377 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 MAD2L2Q9UI95 211 aa13.35□□□□□ -0.27
HLA-B-254ENST00000497377 DHX16O60231 1041 aaKnown RBP13.34□□□□□ -0.27
HLA-B-254ENST00000497377 MYCP01106 439 aaPredicted RBP13.34□□□□□ -0.27
HLA-B-254ENST00000497377 PSMA5P28066 241 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 GNAQP50148 359 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 SNAP25P60880 206 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
HLA-B-254ENST00000497377 CACNB2Q08289 660 aaPredicted RBP13.34□□□□□ -0.27
HLA-B-254ENST00000497377 TRAF1Q13077 416 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 ADCK5Q3MIX3 580 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 SGMS1Q86VZ5 419 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 CTCFLQ8NI51 663 aaPredicted RBP13.34□□□□□ -0.27
HLA-B-254ENST00000497377 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.34□□□□□ -0.27
HLA-B-254ENST00000497377 SENP2Q9HC62 589 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 FLRT1Q9NZU1 646 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 NRBP1Q9UHY1 535 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 SNX14Q9Y5W7 946 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 MYH6P13533 1939 aa13.34□□□□□ -0.27
HLA-B-254ENST00000497377 FAM205CA6NFA0 338 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 MSCO60682 206 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 PGK2P07205 417 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 HOXB3P14651 431 aaPredicted RBP13.33□□□□□ -0.28
HLA-B-254ENST00000497377 SMARCA1P28370 1054 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 TRIM32Q13049 653 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 CDC37Q16543 378 aaPredicted RBP13.33□□□□□ -0.28
HLA-B-254ENST00000497377 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 SYNE3Q6ZMZ3 975 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 STAG2Q8N3U4 1231 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 LZTS2Q9BRK4 669 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 JMJD4Q9H9V9 463 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 A1CFQ9NQ94 594 aaKnown RBP13.33□□□□□ -0.28
HLA-B-254ENST00000497377 SLC12A7Q9Y666 1083 aa13.33□□□□□ -0.28
HLA-B-254ENST00000497377 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
HLA-B-254ENST00000497377 SGPL1O95470 568 aa13.32□□□□□ -0.28
HLA-B-254ENST00000497377 EN2P19622 333 aaPredicted RBP13.32□□□□□ -0.28
HLA-B-254ENST00000497377 CYP2C19P33261 490 aa13.32□□□□□ -0.28
HLA-B-254ENST00000497377 MUM1L1Q5H9M0 696 aa13.32□□□□□ -0.28
HLA-B-254ENST00000497377 MAMDC4Q6UXC1 1216 aa13.32□□□□□ -0.28
HLA-B-254ENST00000497377 FBXO11Q86XK2 927 aa13.32□□□□□ -0.28
HLA-B-254ENST00000497377 U2AF1L4Q8WU68 220 aaKnown RBP13.32□□□□□ -0.28
HLA-B-254ENST00000497377 NUP133Q8WUM0 1156 aa13.32□□□□□ -0.28
HLA-B-254ENST00000497377 JAKMIP1Q96N16 626 aaKnown RBP13.32□□□□□ -0.28
HLA-B-254ENST00000497377 DEFB118Q96PH6 123 aa13.32□□□□□ -0.28
HLA-B-254ENST00000497377 TINF2Q9BSI4 451 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms