RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 IL2RBP14784 551 aa8.27□□□□□ -1.09
MSH5-219ENST00000497269 DNAJA1P31689 397 aaKnown RBP8.27□□□□□ -1.09
MSH5-219ENST00000497269 PHACTR4Q8IZ21 702 aa8.27□□□□□ -1.09
MSH5-219ENST00000497269 USHBP1Q8N6Y0 703 aa8.27□□□□□ -1.09
MSH5-219ENST00000497269 GATA6Q92908 595 aa8.27□□□□□ -1.09
MSH5-219ENST00000497269 PRDM10Q9NQV6 1147 aa8.27□□□□□ -1.09
MSH5-219ENST00000497269 TACC3Q9Y6A5 838 aa8.27□□□□□ -1.09
MSH5-219ENST00000497269 WNK3Q9BYP7 1800 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 SBNO2Q9Y2G9 1366 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 NFAT5O94916 1531 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 GSC2O15499 205 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 TGFB1P01137 390 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 ITGB7P26010 798 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 GJA8P48165 433 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 ZNF827Q17R98 1081 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 ARSHQ5FYA8 562 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 SLC6A19Q695T7 634 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 OVOS1Q6IE37 1185 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 MCATQ8IVS2 390 aaKnown RBP8.26□□□□□ -1.09
MSH5-219ENST00000497269 RIN3Q8TB24 985 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 TINF2Q9BSI4 451 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 DUSP23Q9BVJ7 150 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 ADAM30Q9UKF2 790 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 TPX2Q9ULW0 747 aaKnown RBP8.26□□□□□ -1.09
MSH5-219ENST00000497269 CD163L1Q9NR16 1453 aa8.26□□□□□ -1.09
MSH5-219ENST00000497269 LTN1O94822 1766 aa8.25□□□□□ -1.09
MSH5-219ENST00000497269 TONSLQ96HA7 1378 aa8.25□□□□□ -1.09
MSH5-219ENST00000497269 CST3P01034 146 aaPredicted RBP8.25□□□□□ -1.09
MSH5-219ENST00000497269 AMPHP49418 695 aa8.25□□□□□ -1.09
MSH5-219ENST00000497269 GNL2Q13823 731 aaKnown RBP8.25□□□□□ -1.09
MSH5-219ENST00000497269 RRS1Q15050 365 aaKnown RBP8.25□□□□□ -1.09
MSH5-219ENST00000497269 CDH24Q86UP0 819 aa8.25□□□□□ -1.09
MSH5-219ENST00000497269 MRPL41Q8IXM3 137 aaKnown RBP8.25□□□□□ -1.09
MSH5-219ENST00000497269 GIMAP7Q8NHV1 300 aa8.25□□□□□ -1.09
MSH5-219ENST00000497269 CPLX3Q8WVH0 158 aa8.25□□□□□ -1.09
MSH5-219ENST00000497269 PSMG3-AS1Q96PY0 264 aa8.25□□□□□ -1.09
MSH5-219ENST00000497269 SYT17Q9BSW7 474 aa8.25□□□□□ -1.09
MSH5-219ENST00000497269 TERF2IPQ9NYB0 399 aa8.25□□□□□ -1.09
MSH5-219ENST00000497269 MYOM1P52179 1685 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 A0A1W2PP64 1363 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 CCDC7Q96M83 1385 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 MON2Q7Z3U7 1717 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 SLITRK5O94991 958 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 POLR2BP30876 1174 aaKnown RBP8.24□□□□□ -1.09
MSH5-219ENST00000497269 YARSP54577 528 aaKnown RBP8.24□□□□□ -1.09
MSH5-219ENST00000497269 NAALADL2Q58DX5 795 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 TMEM201Q5SNT2 666 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 DUSP27Q5VZP5 1158 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 LETMD1Q6P1Q0 360 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 ARHGAP27Q6ZUM4 889 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 ZDHHC13Q8IUH4 622 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 FAM181AQ8N9Y4 354 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 COG3Q96JB2 828 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 KIF2CQ99661 725 aa8.24□□□□□ -1.09
MSH5-219ENST00000497269 RGPD2P0DJD1 1756 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 CASZ1Q86V15 1759 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 TNS2Q63HR2 1409 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 SLC22A31A6NKX4 558 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 ADAM23O75077 832 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 RAG1P15918 1043 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 HOXC9P31274 260 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 OGFOD3Q6PK18 319 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 SMIM5Q71RC9 77 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 VPS37DQ86XT2 251 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 REXO1Q8N1G1 1221 aaKnown RBP8.23□□□□□ -1.09
MSH5-219ENST00000497269 MFSD2AQ8NA29 543 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 BAHD1Q8TBE0 780 aaPredicted RBP8.23□□□□□ -1.09
MSH5-219ENST00000497269 RASGRP4Q8TDF6 673 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 IP6K1Q92551 441 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 POLR3GLQ9BT43 218 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 EHMT1Q9H9B1 1298 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 LEMD3Q9Y2U8 911 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 MRVI1Q9Y6F6 885 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 MAP3K19Q56UN5 1328 aa8.23□□□□□ -1.09
MSH5-219ENST00000497269 ATE1O95260 518 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 ITIH2P19823 946 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 CYP27C1Q4G0S4 372 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 NBPF6Q5VWK0 638 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 RUFY4Q6ZNE9 571 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 NBPF4Q96M43 638 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 TESK2Q96S53 571 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.22□□□□□ -1.097e-10■□□□□ 9.3
MSH5-219ENST00000497269 MTFR1LQ9H019 292 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 TFCP2L1Q9NZI6 479 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 GMIPQ9P107 970 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 ZNRF3Q9ULT6 936 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 U3KQE9 123 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 BTAF1O14981 1849 aa8.22□□□□□ -1.09
MSH5-219ENST00000497269 EDC4Q6P2E9 1401 aaKnown RBP8.21□□□□□ -1.09
MSH5-219ENST00000497269 PPM1GO15355 546 aaPredicted RBP8.21□□□□□ -1.1
MSH5-219ENST00000497269 CYP26A1O43174 497 aa8.21□□□□□ -1.1
MSH5-219ENST00000497269 SSBP05455 408 aaKnown RBP eCLIP8.21□□□□□ -1.1
MSH5-219ENST00000497269 ATF4P18848 351 aaPredicted RBP8.21□□□□□ -1.1
MSH5-219ENST00000497269 HOXA10P31260 410 aaPredicted RBP8.21□□□□□ -1.1
MSH5-219ENST00000497269 CHMP4BP1P59074 171 aa8.21□□□□□ -1.1
MSH5-219ENST00000497269 GPR162Q16538 588 aa8.21□□□□□ -1.1
MSH5-219ENST00000497269 ZCRB1Q8TBF4 217 aaKnown RBP8.21□□□□□ -1.1
MSH5-219ENST00000497269 TMEM40Q8WWA1 233 aa8.21□□□□□ -1.1
MSH5-219ENST00000497269 ANAPC16Q96DE5 110 aa8.21□□□□□ -1.1
MSH5-219ENST00000497269 ATG4CQ96DT6 458 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms