RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 CCDC144BQ3MJ40 725 aa22.9■■□□□ 1.26
COL20A1-208ENST00000496810 TRIM60Q495X7 471 aa22.9■■□□□ 1.26
COL20A1-208ENST00000496810 SLC30A10Q6XR72 485 aa22.9■■□□□ 1.26
COL20A1-208ENST00000496810 STOX1Q6ZVD7 989 aa22.9■■□□□ 1.26
COL20A1-208ENST00000496810 CLEC4DQ8WXI8 215 aa22.9■■□□□ 1.26
COL20A1-208ENST00000496810 ANKS1AQ92625 1134 aa22.9■■□□□ 1.26
COL20A1-208ENST00000496810 UBA5Q9GZZ9 404 aa22.9■■□□□ 1.26
COL20A1-208ENST00000496810 PHF24Q9UPV7 400 aa22.9■■□□□ 1.26
COL20A1-208ENST00000496810 ATP11BQ9Y2G3 1177 aa22.9■■□□□ 1.26
COL20A1-208ENST00000496810 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.89■■□□□ 1.25
COL20A1-208ENST00000496810 SNX17Q15036 470 aa22.89■■□□□ 1.25
COL20A1-208ENST00000496810 SLC39A5Q6ZMH5 540 aa22.89■■□□□ 1.25
COL20A1-208ENST00000496810 RUFY2Q8WXA3 655 aa22.89■■□□□ 1.25
COL20A1-208ENST00000496810 KRT23Q9C075 422 aa22.89■■□□□ 1.25
COL20A1-208ENST00000496810 ABHD16BQ9H3Z7 469 aa22.89■■□□□ 1.25
COL20A1-208ENST00000496810 KAT14Q9H8E8 782 aa22.89■■□□□ 1.25
COL20A1-208ENST00000496810 BAZ2BQ9UIF8 2168 aaKnown RBP22.89■■□□□ 1.25
COL20A1-208ENST00000496810 SOX1O00570 391 aaPredicted RBP22.88■■□□□ 1.25
COL20A1-208ENST00000496810 BAATQ14032 418 aaPredicted RBP22.88■■□□□ 1.25
COL20A1-208ENST00000496810 SEC23AQ15436 765 aa22.88■■□□□ 1.25
COL20A1-208ENST00000496810 CNNM2Q9H8M5 875 aa22.88■■□□□ 1.25
COL20A1-208ENST00000496810 SENP2Q9HC62 589 aa22.88■■□□□ 1.25
COL20A1-208ENST00000496810 FAM184BQ9ULE4 1060 aa22.88■■□□□ 1.25
COL20A1-208ENST00000496810 A0A1W2PQ45 241 aaPredicted RBP22.87■■□□□ 1.25
COL20A1-208ENST00000496810 A0A1W2PQY0 241 aa22.87■■□□□ 1.25
COL20A1-208ENST00000496810 MDM2Q00987 491 aaPredicted RBP22.87■■□□□ 1.25
COL20A1-208ENST00000496810 TMEM63BQ5T3F8 832 aa22.87■■□□□ 1.25
COL20A1-208ENST00000496810 RNF180Q86T96 592 aa22.87■■□□□ 1.25
COL20A1-208ENST00000496810 FBXO16Q8IX29 292 aaPredicted RBP22.87■■□□□ 1.25
COL20A1-208ENST00000496810 UBAC1Q9BSL1 405 aa22.87■■□□□ 1.25
COL20A1-208ENST00000496810 WDR19Q8NEZ3 1342 aa22.86■■□□□ 1.25
COL20A1-208ENST00000496810 NT5C2P49902 561 aa22.86■■□□□ 1.25
COL20A1-208ENST00000496810 COL9A3Q14050 684 aaPredicted RBP22.86■■□□□ 1.25
COL20A1-208ENST00000496810 USH1GQ495M9 461 aa22.86■■□□□ 1.25
COL20A1-208ENST00000496810 GPATCH4Q5T3I0 446 aaKnown RBP22.86■■□□□ 1.25
COL20A1-208ENST00000496810 EEPD1Q7L9B9 569 aa22.86■■□□□ 1.25
COL20A1-208ENST00000496810 KLHDC9Q8NEP7 349 aa22.86■■□□□ 1.25
COL20A1-208ENST00000496810 PDGFCQ9NRA1 345 aa22.86■■□□□ 1.25
COL20A1-208ENST00000496810 CTAGE5O15320 804 aa22.85■■□□□ 1.25
COL20A1-208ENST00000496810 DUSP11O75319 330 aaKnown RBP22.85■■□□□ 1.25
COL20A1-208ENST00000496810 CDC37Q16543 378 aaPredicted RBP22.85■■□□□ 1.25
COL20A1-208ENST00000496810 IFIT1BQ5T764 474 aaKnown RBP22.85■■□□□ 1.25
COL20A1-208ENST00000496810 CCSAPQ6IQ19 270 aaPredicted RBP22.85■■□□□ 1.25
COL20A1-208ENST00000496810 STAG2Q8N3U4 1231 aa22.85■■□□□ 1.25
COL20A1-208ENST00000496810 RBM8AQ9Y5S9 174 aaKnown RBP22.85■■□□□ 1.25
COL20A1-208ENST00000496810 U3KPZ7 1027 aaPredicted RBP22.85■■□□□ 1.25
COL20A1-208ENST00000496810 PTPDC1A2A3K4 754 aa22.84■■□□□ 1.25
COL20A1-208ENST00000496810 E7EWF7 191 aa22.84■■□□□ 1.25
COL20A1-208ENST00000496810 CALML3P27482 149 aa22.84■■□□□ 1.25
COL20A1-208ENST00000496810 ACLYP53396 1101 aa22.84■■□□□ 1.25
COL20A1-208ENST00000496810 CCDC178Q5BJE1 867 aa22.84■■□□□ 1.25
COL20A1-208ENST00000496810 CHST3Q7LGC8 479 aa22.84■■□□□ 1.25
COL20A1-208ENST00000496810 SH3RF1Q7Z6J0 888 aa22.84■■□□□ 1.25
COL20A1-208ENST00000496810 ADGRF4Q8IZF3 695 aa22.84■■□□□ 1.25
COL20A1-208ENST00000496810 UPF3AQ9H1J1 476 aaKnown RBP22.84■■□□□ 1.25
COL20A1-208ENST00000496810 ASB14A6NK59 587 aa22.83■■□□□ 1.25
COL20A1-208ENST00000496810 PARP1P09874 1014 aaKnown RBP22.83■■□□□ 1.25
COL20A1-208ENST00000496810 C6orf222P0C671 652 aaPredicted RBP22.83■■□□□ 1.25
COL20A1-208ENST00000496810 BMP8BP34820 402 aa22.83■■□□□ 1.25
COL20A1-208ENST00000496810 ALDH5A1P51649 535 aaPredicted RBP22.83■■□□□ 1.25
COL20A1-208ENST00000496810 ANTXR2P58335 489 aa22.83■■□□□ 1.25
COL20A1-208ENST00000496810 KCNA10Q16322 511 aa22.83■■□□□ 1.25
COL20A1-208ENST00000496810 SLC35G1Q2M3R5 365 aa22.83■■□□□ 1.25
COL20A1-208ENST00000496810 ASPRV1Q53RT3 343 aa22.83■■□□□ 1.25
COL20A1-208ENST00000496810 CENPQQ7L2Z9 268 aaPredicted RBP22.83■■□□□ 1.25
COL20A1-208ENST00000496810 MAP4K1Q92918 833 aa22.83■■□□□ 1.25
COL20A1-208ENST00000496810 LRCH3Q96II8 777 aa22.83■■□□□ 1.25
COL20A1-208ENST00000496810 PRDM5Q9NQX1 630 aaPredicted RBP22.83■■□□□ 1.25
COL20A1-208ENST00000496810 PDLIM7Q9NR12 457 aa22.83■■□□□ 1.25
COL20A1-208ENST00000496810 COL6A3P12111 3177 aa22.83■■□□□ 1.25
COL20A1-208ENST00000496810 A0A1W2PPC1 479 aa22.82■■□□□ 1.24
COL20A1-208ENST00000496810 RPS6P62753 249 aaKnown RBP22.82■■□□□ 1.24
COL20A1-208ENST00000496810 BEX3Q00994 111 aa22.82■■□□□ 1.24
COL20A1-208ENST00000496810 TLE2Q04725 743 aa22.82■■□□□ 1.24
COL20A1-208ENST00000496810 TAPT1Q6NXT6 567 aa22.82■■□□□ 1.24
COL20A1-208ENST00000496810 MORC4Q8TE76 937 aa22.82■■□□□ 1.24
COL20A1-208ENST00000496810 LSG1Q9H089 658 aaKnown RBP22.82■■□□□ 1.24
COL20A1-208ENST00000496810 JMJD4Q9H9V9 463 aa22.82■■□□□ 1.24
COL20A1-208ENST00000496810 CDH23Q9H251 3354 aa22.81■■□□□ 1.24
COL20A1-208ENST00000496810 SMPD1P17405 629 aa22.81■■□□□ 1.24
COL20A1-208ENST00000496810 CST5P28325 142 aaPredicted RBP22.81■■□□□ 1.24
COL20A1-208ENST00000496810 GJA9P57773 515 aa22.81■■□□□ 1.24
COL20A1-208ENST00000496810 QRICH1Q2TAL8 776 aa22.81■■□□□ 1.24
COL20A1-208ENST00000496810 RNF207Q6ZRF8 634 aa22.81■■□□□ 1.24
COL20A1-208ENST00000496810 MB21D2Q8IYB1 491 aaPredicted RBP22.81■■□□□ 1.24
COL20A1-208ENST00000496810 TBC1D5Q92609 795 aa22.81■■□□□ 1.24
COL20A1-208ENST00000496810 ESYT1Q9BSJ8 1104 aa22.81■■□□□ 1.24
COL20A1-208ENST00000496810 UBE2OQ9C0C9 1292 aaKnown RBP22.81■■□□□ 1.24
COL20A1-208ENST00000496810 GNEQ9Y223 722 aaKnown RBP22.81■■□□□ 1.24
COL20A1-208ENST00000496810 TRIM43BA6NCK2 446 aa22.8■■□□□ 1.24
COL20A1-208ENST00000496810 PQBP1O60828 265 aaKnown RBP22.8■■□□□ 1.24
COL20A1-208ENST00000496810 ITGB8P26012 769 aa22.8■■□□□ 1.24
COL20A1-208ENST00000496810 TNFAIP2Q03169 654 aa22.8■■□□□ 1.24
COL20A1-208ENST00000496810 TRDNQ13061 729 aa22.8■■□□□ 1.24
COL20A1-208ENST00000496810 C1orf53Q5VUE5 145 aa22.8■■□□□ 1.24
COL20A1-208ENST00000496810 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
COL20A1-208ENST00000496810 TRIM43Q96BQ3 446 aaPredicted RBP22.8■■□□□ 1.24
COL20A1-208ENST00000496810 TSEN34Q9BSV6 310 aaKnown RBP22.8■■□□□ 1.24
COL20A1-208ENST00000496810 VAT1LQ9HCJ6 419 aa22.8■■□□□ 1.24
COL20A1-208ENST00000496810 GPHNQ9NQX3 736 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms