RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 QRICH1Q2TAL8 776 aa20.5■□□□□ 0.87
RHBDD3-207ENST00000496342 CLEC4DQ8WXI8 215 aa20.5■□□□□ 0.87
RHBDD3-207ENST00000496342 JMJD4Q9H9V9 463 aa20.5■□□□□ 0.87
RHBDD3-207ENST00000496342 CYP39A1Q9NYL5 469 aa20.5■□□□□ 0.87
RHBDD3-207ENST00000496342 KLRF2D3W0D1 207 aa20.49■□□□□ 0.87
RHBDD3-207ENST00000496342 SEPT4O43236 478 aa20.49■□□□□ 0.87
RHBDD3-207ENST00000496342 RXRAP19793 462 aa20.49■□□□□ 0.87
RHBDD3-207ENST00000496342 ARMCX2Q7L311 632 aa20.49■□□□□ 0.87
RHBDD3-207ENST00000496342 NUP133Q8WUM0 1156 aa20.49■□□□□ 0.87
RHBDD3-207ENST00000496342 PCDH10Q9P2E7 1040 aa20.49■□□□□ 0.87
RHBDD3-207ENST00000496342 ZHX1Q9UKY1 873 aaPredicted RBP20.49■□□□□ 0.87
RHBDD3-207ENST00000496342 PFASO15067 1338 aa20.49■□□□□ 0.87
RHBDD3-207ENST00000496342 WDR19Q8NEZ3 1342 aa20.49■□□□□ 0.87
RHBDD3-207ENST00000496342 PTPDC1A2A3K4 754 aa20.48■□□□□ 0.87
RHBDD3-207ENST00000496342 PALM3A6NDB9 673 aaPredicted RBP20.48■□□□□ 0.87
RHBDD3-207ENST00000496342 MYCNP04198 464 aaPredicted RBP20.48■□□□□ 0.87
RHBDD3-207ENST00000496342 MCM5P33992 734 aa20.48■□□□□ 0.87
RHBDD3-207ENST00000496342 TROAPQ12815 778 aa20.48■□□□□ 0.87
RHBDD3-207ENST00000496342 BAATQ14032 418 aaPredicted RBP20.48■□□□□ 0.87
RHBDD3-207ENST00000496342 CCDC144CPQ8IYA2 1237 aa20.48■□□□□ 0.87
RHBDD3-207ENST00000496342 ZNF654Q8IZM8 581 aa20.48■□□□□ 0.87
RHBDD3-207ENST00000496342 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.48■□□□□ 0.87
RHBDD3-207ENST00000496342 SYNGAP1Q96PV0 1343 aa20.48■□□□□ 0.87
RHBDD3-207ENST00000496342 ADCY6O43306 1168 aa20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 PPP1R11O60927 126 aaPredicted RBP20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 CPA1P15085 419 aa20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 GJC2Q5T442 439 aaPredicted RBP20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 RNF20Q5VTR2 975 aa20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 MAMDC4Q6UXC1 1216 aa20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 NECAB2Q7Z6G3 386 aa20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 ZNF467Q7Z7K2 595 aaPredicted RBP20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 ANKLE1Q8NAG6 615 aa20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 C11orf49Q9H6J7 331 aa20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 CNPY2Q9Y2B0 182 aa20.47■□□□□ 0.87
RHBDD3-207ENST00000496342 CYTH3O43739 400 aa20.46■□□□□ 0.87
RHBDD3-207ENST00000496342 PTGS1P23219 599 aa20.46■□□□□ 0.87
RHBDD3-207ENST00000496342 CALML3P27482 149 aa20.46■□□□□ 0.87
RHBDD3-207ENST00000496342 NFXL1Q6ZNB6 911 aa20.46■□□□□ 0.87
RHBDD3-207ENST00000496342 CATIPQ7Z7H3 387 aa20.46■□□□□ 0.87
RHBDD3-207ENST00000496342 HOMER1Q86YM7 354 aa20.46■□□□□ 0.87
RHBDD3-207ENST00000496342 PIBF1Q8WXW3 757 aa20.46■□□□□ 0.87
RHBDD3-207ENST00000496342 TBC1D5Q92609 795 aa20.46■□□□□ 0.87
RHBDD3-207ENST00000496342 DPF3Q92784 378 aa20.46■□□□□ 0.87
RHBDD3-207ENST00000496342 NEK1Q96PY6 1258 aa20.46■□□□□ 0.87
RHBDD3-207ENST00000496342 MSCO60682 206 aa20.45■□□□□ 0.86
RHBDD3-207ENST00000496342 IRX5P78411 483 aaPredicted RBP20.45■□□□□ 0.86
RHBDD3-207ENST00000496342 EEPD1Q7L9B9 569 aa20.45■□□□□ 0.86
RHBDD3-207ENST00000496342 TMEM87BQ96K49 555 aa20.45■□□□□ 0.86
RHBDD3-207ENST00000496342 PIGSQ96S52 555 aa20.45■□□□□ 0.86
RHBDD3-207ENST00000496342 KATNBL1Q9H079 304 aa20.45■□□□□ 0.86
RHBDD3-207ENST00000496342 KIAA1217Q5T5P2 1943 aa20.45■□□□□ 0.86
RHBDD3-207ENST00000496342 PGK1P00558 417 aa20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 HSPA4P34932 840 aa20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 RPS6P62753 249 aaKnown RBP20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 ACVR2BQ13705 512 aa20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 RNF207Q6ZRF8 634 aa20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 FBXO11Q86XK2 927 aa20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 FBXO16Q8IX29 292 aaPredicted RBP20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 MSL3Q8N5Y2 521 aaKnown RBP20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 MTMR8Q96EF0 704 aa20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 HTATIP2Q9BUP3 242 aa20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 NRBP1Q9UHY1 535 aa20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 SNX14Q9Y5W7 946 aa20.44■□□□□ 0.86
RHBDD3-207ENST00000496342 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.43■□□□□ 0.86
RHBDD3-207ENST00000496342 CCDC69A6NI79 296 aa20.43■□□□□ 0.86
RHBDD3-207ENST00000496342 DDAH1O94760 285 aa20.43■□□□□ 0.86
RHBDD3-207ENST00000496342 PLEKHA8P1O95397 391 aa20.43■□□□□ 0.86
RHBDD3-207ENST00000496342 COL6A1P12109 1028 aa20.43■□□□□ 0.86
RHBDD3-207ENST00000496342 AKR1A1P14550 325 aa20.43■□□□□ 0.86
RHBDD3-207ENST00000496342 ALDH5A1P51649 535 aaPredicted RBP20.43■□□□□ 0.86
RHBDD3-207ENST00000496342 PRPF38BQ5VTL8 546 aaKnown RBP20.43■□□□□ 0.86
RHBDD3-207ENST00000496342 CMTR1Q8N1G2 835 aaKnown RBP20.43■□□□□ 0.86
RHBDD3-207ENST00000496342 ABCB11O95342 1321 aa20.43■□□□□ 0.86
RHBDD3-207ENST00000496342 RARBP10826 455 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 EXOSC10Q01780 885 aaKnown RBP20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 LRRC41Q15345 812 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 CCDC144BQ3MJ40 725 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 TSGA10IPQ3SY00 556 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 TMEM63BQ5T3F8 832 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 KCNB2Q92953 911 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 JAKMIP1Q96N16 626 aaKnown RBP20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 MTA3Q9BTC8 594 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 RIOX1Q9H6W3 641 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 XPNPEP3Q9NQH7 507 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 PDGFCQ9NRA1 345 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 COL20A1Q9P218 1284 aa20.42■□□□□ 0.86
RHBDD3-207ENST00000496342 MYADML2A6NDP7 307 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 H0YGN5 161 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 OPLAHO14841 1288 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 ZBTB5O15062 677 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 REC8O95072 547 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 LIFRP42702 1097 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 LRRC26Q2I0M4 334 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 MICU3Q86XE3 530 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 C7orf61Q8IZ16 206 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 CTCFLQ8NI51 663 aaPredicted RBP20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 AMNQ9BXJ7 453 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 SENP6Q9GZR1 1112 aaPredicted RBP20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 ABHD16BQ9H3Z7 469 aa20.41■□□□□ 0.86
RHBDD3-207ENST00000496342 BRPF3Q9ULD4 1205 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms