RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TAF6LQ9Y6J9 622 aa20.57■□□□□ 0.88
HDAC4-211ENST00000494800 SNAI1O95863 264 aaPredicted RBP20.56■□□□□ 0.88
HDAC4-211ENST00000494800 ZNF865P0CJ78 1059 aaPredicted RBP20.56■□□□□ 0.88
HDAC4-211ENST00000494800 ACVR2BQ13705 512 aa20.56■□□□□ 0.88
HDAC4-211ENST00000494800 RNF180Q86T96 592 aa20.56■□□□□ 0.88
HDAC4-211ENST00000494800 CCDC144CPQ8IYA2 1237 aa20.56■□□□□ 0.88
HDAC4-211ENST00000494800 TMTC2Q8N394 836 aa20.56■□□□□ 0.88
HDAC4-211ENST00000494800 CPVLQ9H3G5 476 aa20.56■□□□□ 0.88
HDAC4-211ENST00000494800 KLRF2D3W0D1 207 aa20.55■□□□□ 0.88
HDAC4-211ENST00000494800 H0YGN5 161 aa20.55■□□□□ 0.88
HDAC4-211ENST00000494800 PRC1O43663 620 aa20.55■□□□□ 0.88
HDAC4-211ENST00000494800 COL6A1P12109 1028 aa20.55■□□□□ 0.88
HDAC4-211ENST00000494800 TAL1P17542 331 aaPredicted RBP20.55■□□□□ 0.88
HDAC4-211ENST00000494800 USH1GQ495M9 461 aa20.55■□□□□ 0.88
HDAC4-211ENST00000494800 RNF207Q6ZRF8 634 aa20.55■□□□□ 0.88
HDAC4-211ENST00000494800 TMEM87BQ96K49 555 aa20.55■□□□□ 0.88
HDAC4-211ENST00000494800 SENP6Q9GZR1 1112 aaPredicted RBP20.55■□□□□ 0.88
HDAC4-211ENST00000494800 MAF1Q9H063 256 aa20.55■□□□□ 0.88
HDAC4-211ENST00000494800 VAT1LQ9HCJ6 419 aa20.55■□□□□ 0.88
HDAC4-211ENST00000494800 ABCB11O95342 1321 aa20.54■□□□□ 0.88
HDAC4-211ENST00000494800 LOC102724159A0A0B4J2E5 919 aa20.54■□□□□ 0.88
HDAC4-211ENST00000494800 NFIBO00712 420 aa20.54■□□□□ 0.88
HDAC4-211ENST00000494800 TRAF1Q13077 416 aa20.54■□□□□ 0.88
HDAC4-211ENST00000494800 BAATQ14032 418 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-211ENST00000494800 PWP2Q15269 919 aaKnown RBP20.54■□□□□ 0.88
HDAC4-211ENST00000494800 GJC2Q5T442 439 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-211ENST00000494800 NFXL1Q6ZNB6 911 aa20.54■□□□□ 0.88
HDAC4-211ENST00000494800 FBXO11Q86XK2 927 aa20.54■□□□□ 0.88
HDAC4-211ENST00000494800 FGD4Q96M96 766 aa20.54■□□□□ 0.88
HDAC4-211ENST00000494800 SPC25Q9HBM1 224 aa20.54■□□□□ 0.88
HDAC4-211ENST00000494800 PALM3A6NDB9 673 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-211ENST00000494800 SOWAHBA6NEL2 793 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 CCDC69A6NI79 296 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 B4DLN1 442 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 CALML3P27482 149 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 MRPL12P52815 198 aaKnown RBP20.53■□□□□ 0.88
HDAC4-211ENST00000494800 ANTXR2P58335 489 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 GRM4Q14833 912 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 QRICH1Q2TAL8 776 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 MCF2L2Q86YR7 1114 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 STAG2Q8N3U4 1231 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 RGS22Q8NE09 1264 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 IGDCC4Q8TDY8 1250 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 CLEC4DQ8WXI8 215 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 JMJD4Q9H9V9 463 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 MAD2L2Q9UI95 211 aa20.53■□□□□ 0.88
HDAC4-211ENST00000494800 MRPL11Q9Y3B7 192 aaKnown RBP20.53■□□□□ 0.88
HDAC4-211ENST00000494800 KIF5BP33176 963 aa20.52■□□□□ 0.88
HDAC4-211ENST00000494800 KRT32Q14532 448 aa20.52■□□□□ 0.88
HDAC4-211ENST00000494800 LRRC41Q15345 812 aa20.52■□□□□ 0.88
HDAC4-211ENST00000494800 C7orf61Q8IZ16 206 aa20.52■□□□□ 0.88
HDAC4-211ENST00000494800 CTCFLQ8NI51 663 aaPredicted RBP20.52■□□□□ 0.88
HDAC4-211ENST00000494800 NUP133Q8WUM0 1156 aa20.52■□□□□ 0.88
HDAC4-211ENST00000494800 AMNQ9BXJ7 453 aa20.52■□□□□ 0.88
HDAC4-211ENST00000494800 FRMPD3Q5JV73 1810 aa20.51■□□□□ 0.87
HDAC4-211ENST00000494800 ZBTB5O15062 677 aa20.51■□□□□ 0.87
HDAC4-211ENST00000494800 DUSP11O75319 330 aaKnown RBP20.51■□□□□ 0.87
HDAC4-211ENST00000494800 DDAH1O94760 285 aa20.51■□□□□ 0.87
HDAC4-211ENST00000494800 REC8O95072 547 aa20.51■□□□□ 0.87
HDAC4-211ENST00000494800 TROAPQ12815 778 aa20.51■□□□□ 0.87
HDAC4-211ENST00000494800 CCDC144BQ3MJ40 725 aa20.51■□□□□ 0.87
HDAC4-211ENST00000494800 MAP3K14Q99558 947 aa20.51■□□□□ 0.87
HDAC4-211ENST00000494800 LY9Q9HBG7 655 aa20.51■□□□□ 0.87
HDAC4-211ENST00000494800 PGK1P00558 417 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 CALM1P0DP23 149 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 CALM2P0DP24 149 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 CALM3P0DP25 149 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 LIFRP42702 1097 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 ALDH5A1P51649 535 aaPredicted RBP20.5■□□□□ 0.87
HDAC4-211ENST00000494800 RPS6P62753 249 aaKnown RBP20.5■□□□□ 0.87
HDAC4-211ENST00000494800 SLC30A10Q6XR72 485 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 NOL8Q76FK4 1167 aaKnown RBP20.5■□□□□ 0.87
HDAC4-211ENST00000494800 ZNF654Q8IZM8 581 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 DNERQ8NFT8 737 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 NEK1Q96PY6 1258 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 SENP2Q9HC62 589 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 VTA1Q9NP79 307 aa20.5■□□□□ 0.87
HDAC4-211ENST00000494800 SH2B2O14492 632 aaPredicted RBP20.49■□□□□ 0.87
HDAC4-211ENST00000494800 GNAQP50148 359 aa20.49■□□□□ 0.87
HDAC4-211ENST00000494800 TNFAIP2Q03169 654 aa20.49■□□□□ 0.87
HDAC4-211ENST00000494800 SYNE3Q6ZMZ3 975 aa20.49■□□□□ 0.87
HDAC4-211ENST00000494800 LZTS2Q9BRK4 669 aa20.49■□□□□ 0.87
HDAC4-211ENST00000494800 SLC12A7Q9Y666 1083 aa20.49■□□□□ 0.87
HDAC4-211ENST00000494800 SYNRGQ9UMZ2 1314 aa20.49■□□□□ 0.87
HDAC4-211ENST00000494800 HMGB1P09429 215 aaKnown RBP20.48■□□□□ 0.87
HDAC4-211ENST00000494800 ADCYAP1R1P41586 468 aa20.48■□□□□ 0.87
HDAC4-211ENST00000494800 ATN1P54259 1190 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-211ENST00000494800 PDE4DQ08499 809 aa20.48■□□□□ 0.87
HDAC4-211ENST00000494800 LRRC26Q2I0M4 334 aa20.48■□□□□ 0.87
HDAC4-211ENST00000494800 TSGA10IPQ3SY00 556 aa20.48■□□□□ 0.87
HDAC4-211ENST00000494800 HOMER1Q86YM7 354 aa20.48■□□□□ 0.87
HDAC4-211ENST00000494800 MORC4Q8TE76 937 aa20.48■□□□□ 0.87
HDAC4-211ENST00000494800 LENG1Q96BZ8 264 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-211ENST00000494800 TSEN34Q9BSV6 310 aaKnown RBP20.48■□□□□ 0.87
HDAC4-211ENST00000494800 KATNBL1Q9H079 304 aa20.48■□□□□ 0.87
HDAC4-211ENST00000494800 RIOX1Q9H6W3 641 aa20.48■□□□□ 0.87
HDAC4-211ENST00000494800 PHF24Q9UPV7 400 aa20.48■□□□□ 0.87
HDAC4-211ENST00000494800 MOXD2PA6NHM9 499 aa20.47■□□□□ 0.87
HDAC4-211ENST00000494800 ADAMTS4O75173 837 aa20.47■□□□□ 0.87
HDAC4-211ENST00000494800 C6orf222P0C671 652 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms