RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 TMTC2Q8N394 836 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 CACTINQ8WUQ7 758 aaKnown RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 UPF3AQ9H1J1 476 aaKnown RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 FAM198AQ9UFP1 575 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 PNMA2Q9UL42 364 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 AGTPBP1Q9UPW5 1226 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 PCDHB6Q9Y5E3 794 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 MYO1BO43795 1136 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 DEXIO95424 95 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 FDX1P10109 184 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 POU3F3P20264 500 aaPredicted RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 CST5P28325 142 aaPredicted RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 TOB1P50616 345 aaPredicted RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 SEC23AQ15436 765 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 OTOP1Q7RTM1 612 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 NBPF11Q86T75 865 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 WASF1Q92558 559 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 MAP3K14Q99558 947 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 NAT10Q9H0A0 1025 aaKnown RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 MCM9Q9NXL9 1143 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 PTPRSQ13332 1948 aa8□□□□□ -1.13
HERC4-211ENST00000492996 CAVIN2O95810 425 aa8□□□□□ -1.13
HERC4-211ENST00000492996 GJA8P48165 433 aa8□□□□□ -1.13
HERC4-211ENST00000492996 RBL2Q08999 1139 aa8□□□□□ -1.13
HERC4-211ENST00000492996 FAM110CQ1W6H9 321 aa8□□□□□ -1.13
HERC4-211ENST00000492996 LONRF3Q496Y0 759 aa8□□□□□ -1.13
HERC4-211ENST00000492996 HSP90AA4PQ58FG1 418 aa8□□□□□ -1.13
HERC4-211ENST00000492996 CATIPQ7Z7H3 387 aa8□□□□□ -1.13
HERC4-211ENST00000492996 TEKT1Q969V4 418 aa8□□□□□ -1.13
HERC4-211ENST00000492996 SHISA4Q96DD7 197 aa8□□□□□ -1.13
HERC4-211ENST00000492996 CRNKL1Q9BZJ0 848 aaKnown RBP8□□□□□ -1.13
HERC4-211ENST00000492996 DCP1AQ9NPI6 582 aaPredicted RBP8□□□□□ -1.13
HERC4-211ENST00000492996 KIAA1217Q5T5P2 1943 aa8□□□□□ -1.13
HERC4-211ENST00000492996 ADM5C9JUS6 153 aa8□□□□□ -1.13
HERC4-211ENST00000492996 SMC2O95347 1197 aa8□□□□□ -1.13
HERC4-211ENST00000492996 PAPLNO95428 1278 aa8□□□□□ -1.13
HERC4-211ENST00000492996 EGFRP00533 1210 aa8□□□□□ -1.13
HERC4-211ENST00000492996 GRIK5Q16478 980 aa8□□□□□ -1.13
HERC4-211ENST00000492996 HOMEZQ8IX15 550 aa8□□□□□ -1.13
HERC4-211ENST00000492996 PTPN18Q99952 460 aa8□□□□□ -1.13
HERC4-211ENST00000492996 ZFYVE28Q9HCC9 887 aa8□□□□□ -1.13
HERC4-211ENST00000492996 ZNFX1Q9P2E3 1918 aaKnown RBP8□□□□□ -1.13
HERC4-211ENST00000492996 STK36Q9NRP7 1315 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 TSPY2A6NKD2 308 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 CLGNO14967 610 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 TPM3P06753 285 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 MNX1P50219 401 aaPredicted RBP7.99□□□□□ -1.13
HERC4-211ENST00000492996 FAM193AP78312 1265 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 DLGAP5Q15398 846 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 FOXP4Q8IVH2 680 aaPredicted RBP7.99□□□□□ -1.13
HERC4-211ENST00000492996 CNNM3Q8NE01 707 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 KCNG1Q9UIX4 513 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 KCNH3Q9ULD8 1083 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 TRAF5O00463 557 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 USP5P45974 858 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 OAZ1P54368 228 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 PTPN21Q16825 1174 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 CYP4F22Q6NT55 531 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 USP49Q70CQ1 688 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 KRI1Q8N9T8 703 aaKnown RBP7.99□□□□□ -1.13
HERC4-211ENST00000492996 DYNLL2Q96FJ2 89 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 C16orf45Q96MC5 204 aaPredicted RBP7.99□□□□□ -1.13
HERC4-211ENST00000492996 RNF216Q9NWF9 866 aaPredicted RBP7.99□□□□□ -1.13
HERC4-211ENST00000492996 ANAPC4Q9UJX5 808 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 ATG2AQ2TAZ0 1938 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 SIP14410 1827 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 CCDC66A2RUB6 948 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 PPP6R2O75170 966 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 HUNKP57058 714 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 EARS2Q5JPH6 523 aaKnown RBP7.99□□□□□ -1.13
HERC4-211ENST00000492996 GRAMD1CQ8IYS0 662 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 OGFOD1Q8N543 542 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 BRI3BPQ8WY22 251 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 IFNKQ9P0W0 207 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 DAGLAQ9Y4D2 1042 aa7.99□□□□□ -1.13
HERC4-211ENST00000492996 IGF2BP3O00425 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
HERC4-211ENST00000492996 POLR2DO15514 142 aaKnown RBP7.98□□□□□ -1.13
HERC4-211ENST00000492996 CUTAO60888 179 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 LDHBP07195 334 aaKnown RBP7.98□□□□□ -1.13
HERC4-211ENST00000492996 ATP1A3P13637 1013 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 NLRP12P59046 1061 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 TROAPQ12815 778 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 LRIT3Q3SXY7 679 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 RESP18Q5W5W9 173 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 SLC44A5Q8NCS7 719 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 SOCS4Q8WXH5 440 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 PARK7Q99497 189 aaKnown RBP7.98□□□□□ -1.13
HERC4-211ENST00000492996 SAP30BPQ9UHR5 308 aaKnown RBP7.98□□□□□ -1.13
HERC4-211ENST00000492996 GJD2Q9UKL4 321 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 Q9Y3F1 56 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 NID2Q14112 1375 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 LDHCP07864 332 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 PCP11498 1178 aaKnown RBP7.98□□□□□ -1.13
HERC4-211ENST00000492996 PABPC4Q13310 644 aaKnown RBP eCLIP7.98□□□□□ -1.13
HERC4-211ENST00000492996 PKN1Q16512 942 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 CTCFLQ8NI51 663 aaPredicted RBP7.98□□□□□ -1.13
HERC4-211ENST00000492996 XPO4Q9C0E2 1151 aaKnown RBP7.98□□□□□ -1.13
HERC4-211ENST00000492996 SWAP70Q9UH65 585 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 HPSEQ9Y251 543 aa7.98□□□□□ -1.13
HERC4-211ENST00000492996 PCDHA5Q9Y5H7 936 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms