RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 TDP2O95551 362 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TUBB4AP04350 444 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 IBSPP21815 317 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CCDC70Q6NSX1 233 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 DPP8Q6V1X1 898 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 SEPT11Q9NVA2 429 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 PCDHA6Q9UN73 950 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 PCDHA8Q9Y5H6 950 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 SAR1BQ9Y6B6 198 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 OR52Z1P0C646 297 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 FUT2Q10981 343 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 REXO1Q8N1G1 1221 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CEP95Q96GE4 821 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 RUFY1Q96T51 708 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ANKRD2Q9GZV1 360 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 LACRTQ9GZZ8 138 aa16.97■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CYTH3O43739 400 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 APBA1Q02410 837 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 CALCRLQ16602 461 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 ARHGEF1Q92888 912 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 MMS19Q96T76 1030 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 LMTK3Q96Q04 1460 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 H7C1D1 291 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 MOCS3O95396 460 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 PPP2R5BQ15173 497 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 USH1GQ495M9 461 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 SV2BQ7L1I2 683 aa16.96■□□□□ 0.31
TNFRSF1B-203ENST00000492361 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 NOP2P46087 812 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 ZNF622Q969S3 477 aaKnown RBP eCLIP16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 LONP1P36776 959 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 CDK8P49336 464 aa16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 GNAQP50148 359 aa16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 PLS1Q14651 629 aa16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 RCSD1Q6JBY9 416 aa16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 ZNF804AQ7Z570 1209 aa16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 TMEM266Q2M3C6 531 aa16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 TRAPPC3LQ5T215 181 aa16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 PDXDC2PQ6P474 469 aa16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 GLIS3Q8NEA6 775 aa16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 NHEJ1Q9H9Q4 299 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 LAMA4Q16363 1823 aa16.95■□□□□ 0.3
TNFRSF1B-203ENST00000492361 MEIS1O00470 390 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 RASSF7Q02833 373 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 CASP8Q14790 479 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 TTBK2Q6IQ55 1244 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 TICAM2Q86XR7 235 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 IFIH1Q9BYX4 1025 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 NYXQ9GZU5 481 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 LDHCP07864 332 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 RAPGEF1Q13905 1077 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 NPY5RQ15761 445 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 SND1Q7KZF4 910 aaKnown RBP eCLIP16.94■□□□□ 0.38e-7■■□□□ 14.1
TNFRSF1B-203ENST00000492361 NEK8Q86SG6 692 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 FUT8Q9BYC5 575 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 KRT79Q5XKE5 535 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 SLC30A10Q6XR72 485 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 AMIGO3Q86WK7 504 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 NAA15Q9BXJ9 866 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 PACSIN2Q9UNF0 486 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 CRYBG1Q9Y4K1 1723 aa16.94■□□□□ 0.3
TNFRSF1B-203ENST00000492361 USO1O60763 962 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 CDKAL1Q5VV42 579 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 FBXO33Q7Z6M2 555 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 P2RX5Q93086 422 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 GNA11P29992 359 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 AMPD3Q01432 767 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 CYP4A11Q02928 519 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 TBC1D10BQ4KMP7 808 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 WDR66Q8TBY9 1149 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 PKD2L1Q9P0L9 805 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 MYO5AQ9Y4I1 1855 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 FAM237AA0A1B0GTK4 181 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 KRT83P78385 493 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 HERC4Q5GLZ8 1057 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 ACBD3Q9H3P7 528 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 ANKZF1Q9H8Y5 726 aa16.93■□□□□ 0.3
TNFRSF1B-203ENST00000492361 NPHP3-ACAD11A0A0J9YXS1 232 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 MAGEA1P43355 309 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 DCAF17Q5H9S7 520 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 NT5DC1Q5TFE4 455 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 KCTD16Q68DU8 428 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 SECISBP2LQ93073 1101 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 BMP2KQ9NSY1 1161 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 BCS1LQ9Y276 419 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 ESYT3A0FGR9 886 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 CCDC151A5D8V7 595 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 TMCO5BA8MYB1 307 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 USP17L15C9J2P7 530 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 USP17L13C9JLJ4 530 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 USP17L11C9JVI0 530 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 USP17L18D6R9N7 530 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 USP17L22D6RA61 530 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 USP17L17D6RBQ6 530 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 USP17L19D6RCP7 530 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 USP17L20D6RJB6 530 aa16.92■□□□□ 0.3
TNFRSF1B-203ENST00000492361 TRIM66O15016 1216 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms