RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 PCDHA4Q9UN74 947 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 IVLP07476 585 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 AMPD2Q01433 879 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 NFRKBQ6P4R8 1299 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 FAM107BQ9H098 131 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 DMGDHQ9UI17 866 aaKnown RBP12.44□□□□□ -0.42
VPS72-205ENST00000491094 COL5A2P05997 1499 aaPredicted RBP12.44□□□□□ -0.42
VPS72-205ENST00000491094 ATRNO75882 1429 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 ZEB2O60315 1214 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 CAMTA2O94983 1202 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 ATP1A2P50993 1020 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 SOGA3Q5TF21 947 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 LRRC1Q9BTT6 524 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.44□□□□□ -0.42
VPS72-205ENST00000491094 SELENOOQ9BVL4 669 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 ITIH6Q6UXX5 1313 aa12.44□□□□□ -0.42
VPS72-205ENST00000491094 ESYT3A0FGR9 886 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 CCT5P48643 541 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 TUBB2AQ13885 445 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 MICALL1Q8N3F8 863 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 RRP36Q96EU6 259 aaKnown RBP12.43□□□□□ -0.42
VPS72-205ENST00000491094 TUBB2BQ9BVA1 445 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 SAMM50Q9Y512 469 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 GOLGA6CA6NDK9 693 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 GOLGA6BA6NDN3 693 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 USO1O60763 962 aaKnown RBP12.43□□□□□ -0.42
VPS72-205ENST00000491094 NTSR2O95665 410 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 GOLGA6DP0CG33 693 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 EIF4A3P38919 411 aaKnown RBP12.43□□□□□ -0.42
VPS72-205ENST00000491094 DDB1Q16531 1140 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 PARP10Q53GL7 1025 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 PROCA1Q8NCQ7 364 aaPredicted RBP12.43□□□□□ -0.42
VPS72-205ENST00000491094 P2RX5Q93086 422 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 GOLGA6AQ9NYA3 693 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 CAPN11Q9UMQ6 739 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 ZNF335Q9H4Z2 1342 aaPredicted RBP12.43□□□□□ -0.42
VPS72-205ENST00000491094 SMCO2A6NFE2 343 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 KLRF2D3W0D1 207 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
VPS72-205ENST00000491094 RASSF7Q02833 373 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 MS4A14Q96JA4 679 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 BRIP1Q9BX63 1249 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 CAPN6Q9Y6Q1 641 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 USP54Q70EL1 1684 aa12.43□□□□□ -0.42
VPS72-205ENST00000491094 EIF3CLB5ME19 914 aaKnown RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 TACC1O75410 805 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 LRRC15Q8TF66 581 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 EIF3CQ99613 913 aaKnown RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 TMEM260Q9NX78 707 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 MYO1AQ9UBC5 1043 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 PCDHA6Q9UN73 950 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 PCDHA8Q9Y5H6 950 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 IBSPP21815 317 aaPredicted RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 MAGEA1P43355 309 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 CKAP4Q07065 602 aaKnown RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 RCSD1Q6JBY9 416 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 FAM76AQ8TAV0 307 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 SRP68Q9UHB9 627 aaKnown RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 ANAPC4Q9UJX5 808 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 HPCAL4Q9UM19 191 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 SRCAPQ6ZRS2 3230 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 EPHB6O15197 1021 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 SYF2O95926 243 aaKnown RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 UBE4AQ14139 1066 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 CT47A1Q5JQC4 288 aaPredicted RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 AMOTL1Q8IY63 956 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 DUSP9Q99956 384 aaKnown RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 IL17RBQ9NRM6 502 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 LIG3P49916 1009 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 GUCY2FP51841 1108 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 DNAAF5Q86Y56 855 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 NELFCDQ8IXH7 590 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 SH3RF3Q8TEJ3 882 aaPredicted RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 PYM1Q9BRP8 204 aaKnown RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 PACSIN2Q9UNF0 486 aaPredicted RBP12.42□□□□□ -0.42
VPS72-205ENST00000491094 AKAP11Q9UKA4 1901 aa12.42□□□□□ -0.42
VPS72-205ENST00000491094 EEF1GP26641 437 aaKnown RBP12.41□□□□□ -0.42
VPS72-205ENST00000491094 TRAPPC10P48553 1259 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 APBA1Q02410 837 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 TTI2Q6NXR4 508 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 ZNF652Q9Y2D9 606 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 FRMPD2Q68DX3 1309 aaPredicted RBP12.41□□□□□ -0.42
VPS72-205ENST00000491094 CYTH3O43739 400 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 SF3A3Q12874 501 aaKnown RBP eCLIP12.41□□□□□ -0.42
VPS72-205ENST00000491094 CALML4Q96GE6 196 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 MYH8P13535 1937 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 PSMD14O00487 310 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 CCNE1P24864 410 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 PAFAH1B1P43034 410 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 RCAN1P53805 252 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 GFPT1Q06210 699 aaPredicted RBP12.41□□□□□ -0.42
VPS72-205ENST00000491094 SH2D3CQ8N5H7 860 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 GLIS3Q8NEA6 775 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 TBCKQ8TEA7 893 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 COA7Q96BR5 231 aa12.41□□□□□ -0.42
VPS72-205ENST00000491094 NLRP3Q96P20 1036 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms