RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 BMP8BP34820 402 aa36.74■■■■□ 3.47
LDB1-204ENST00000490751 CCDC144BQ3MJ40 725 aa36.74■■■■□ 3.47
LDB1-204ENST00000490751 UBA5Q9GZZ9 404 aa36.74■■■■□ 3.47
LDB1-204ENST00000490751 CPVLQ9H3G5 476 aa36.74■■■■□ 3.47
LDB1-204ENST00000490751 PNMA2Q9UL42 364 aa36.74■■■■□ 3.47
LDB1-204ENST00000490751 U3KPZ7 1027 aaPredicted RBP36.74■■■■□ 3.47
LDB1-204ENST00000490751 ASTN1O14525 1302 aa36.74■■■■□ 3.47
LDB1-204ENST00000490751 NFIBO00712 420 aa36.73■■■■□ 3.47
LDB1-204ENST00000490751 DUSP11O75319 330 aaKnown RBP36.73■■■■□ 3.47
LDB1-204ENST00000490751 ADCY6O43306 1168 aa36.72■■■■□ 3.47
LDB1-204ENST00000490751 TRDNQ13061 729 aa36.72■■■■□ 3.47
LDB1-204ENST00000490751 SNX17Q15036 470 aa36.72■■■■□ 3.47
LDB1-204ENST00000490751 CYB5R4Q7L1T6 521 aa36.72■■■■□ 3.47
LDB1-204ENST00000490751 WDR19Q8NEZ3 1342 aa36.72■■■■□ 3.47
LDB1-204ENST00000490751 BAATQ14032 418 aaPredicted RBP36.71■■■■□ 3.47
LDB1-204ENST00000490751 TRIM60Q495X7 471 aa36.71■■■■□ 3.47
LDB1-204ENST00000490751 PURBQ96QR8 312 aaKnown RBP36.71■■■■□ 3.47
LDB1-204ENST00000490751 DDX49Q9Y6V7 483 aaKnown RBP36.71■■■■□ 3.47
LDB1-204ENST00000490751 ASPRV1Q53RT3 343 aa36.7■■■■□ 3.47
LDB1-204ENST00000490751 IFIT1BQ5T764 474 aaKnown RBP36.7■■■■□ 3.47
LDB1-204ENST00000490751 KLHDC9Q8NEP7 349 aa36.7■■■■□ 3.47
LDB1-204ENST00000490751 CLEC4DQ8WXI8 215 aa36.7■■■■□ 3.47
LDB1-204ENST00000490751 A0A1W2PQ45 241 aaPredicted RBP36.69■■■■□ 3.46
LDB1-204ENST00000490751 A0A1W2PQY0 241 aa36.69■■■■□ 3.46
LDB1-204ENST00000490751 PTPDC1A2A3K4 754 aa36.69■■■■□ 3.46
LDB1-204ENST00000490751 TSEN34Q9BSV6 310 aaKnown RBP36.69■■■■□ 3.46
LDB1-204ENST00000490751 MYADML2A6NDP7 307 aa36.68■■■■□ 3.46
LDB1-204ENST00000490751 SEC23AQ15436 765 aa36.68■■■■□ 3.46
LDB1-204ENST00000490751 C1orf53Q5VUE5 145 aa36.68■■■■□ 3.46
LDB1-204ENST00000490751 CENPQQ7L2Z9 268 aaPredicted RBP36.68■■■■□ 3.46
LDB1-204ENST00000490751 PRKAG2Q9UGJ0 569 aa36.68■■■■□ 3.46
LDB1-204ENST00000490751 TAF6LQ9Y6J9 622 aa36.68■■■■□ 3.46
LDB1-204ENST00000490751 PARP1P09874 1014 aaKnown RBP36.67■■■■□ 3.46
LDB1-204ENST00000490751 IRX5P78411 483 aaPredicted RBP36.67■■■■□ 3.46
LDB1-204ENST00000490751 MDM2Q00987 491 aaPredicted RBP36.67■■■■□ 3.46
LDB1-204ENST00000490751 SLC30A10Q6XR72 485 aa36.67■■■■□ 3.46
LDB1-204ENST00000490751 UBE2OQ9C0C9 1292 aaKnown RBP36.67■■■■□ 3.46
LDB1-204ENST00000490751 SPC25Q9HBM1 224 aa36.67■■■■□ 3.46
LDB1-204ENST00000490751 LTBP2Q14767 1821 aa36.66■■■■□ 3.46
LDB1-204ENST00000490751 MYH6P13533 1939 aa36.66■■■■□ 3.46
LDB1-204ENST00000490751 C6orf222P0C671 652 aaPredicted RBP36.66■■■■□ 3.46
LDB1-204ENST00000490751 ACLYP53396 1101 aa36.66■■■■□ 3.46
LDB1-204ENST00000490751 CDC37Q16543 378 aaPredicted RBP36.66■■■■□ 3.46
LDB1-204ENST00000490751 USH1GQ495M9 461 aa36.66■■■■□ 3.46
LDB1-204ENST00000490751 ADGRF4Q8IZF3 695 aa36.66■■■■□ 3.46
LDB1-204ENST00000490751 MAP4K1Q92918 833 aa36.66■■■■□ 3.46
LDB1-204ENST00000490751 UPF3AQ9H1J1 476 aaKnown RBP36.66■■■■□ 3.46
LDB1-204ENST00000490751 ADD3Q9UEY8 706 aaKnown RBP36.66■■■■□ 3.46
LDB1-204ENST00000490751 C11orf97A0A1B0GVM6 126 aaPredicted RBP36.65■■■■□ 3.46
LDB1-204ENST00000490751 CALML3P27482 149 aa36.65■■■■□ 3.46
LDB1-204ENST00000490751 CST5P28325 142 aaPredicted RBP36.65■■■■□ 3.46
LDB1-204ENST00000490751 GJA9P57773 515 aa36.65■■■■□ 3.46
LDB1-204ENST00000490751 KCNA10Q16322 511 aa36.65■■■■□ 3.46
LDB1-204ENST00000490751 CCSAPQ6IQ19 270 aaPredicted RBP36.65■■■■□ 3.46
LDB1-204ENST00000490751 RNF207Q6ZRF8 634 aa36.65■■■■□ 3.46
LDB1-204ENST00000490751 RALYLQ86SE5 291 aaKnown RBP36.65■■■■□ 3.46
LDB1-204ENST00000490751 MOXD2PA6NHM9 499 aa36.64■■■■□ 3.46
LDB1-204ENST00000490751 E7EWF7 191 aa36.64■■■■□ 3.46
LDB1-204ENST00000490751 ALDH5A1P51649 535 aaPredicted RBP36.64■■■■□ 3.46
LDB1-204ENST00000490751 TNFAIP2Q03169 654 aa36.64■■■■□ 3.46
LDB1-204ENST00000490751 EEPD1Q7L9B9 569 aa36.64■■■■□ 3.46
LDB1-204ENST00000490751 SKAP1Q86WV1 359 aa36.64■■■■□ 3.46
LDB1-204ENST00000490751 FBXO16Q8IX29 292 aaPredicted RBP36.64■■■■□ 3.46
LDB1-204ENST00000490751 MORC4Q8TE76 937 aa36.64■■■■□ 3.46
LDB1-204ENST00000490751 PRDM5Q9NQX1 630 aaPredicted RBP36.64■■■■□ 3.46
LDB1-204ENST00000490751 RBM8AQ9Y5S9 174 aaKnown RBP36.64■■■■□ 3.46
LDB1-204ENST00000490751 DHX16O60231 1041 aaKnown RBP36.63■■■■□ 3.45
LDB1-204ENST00000490751 STOX1Q6ZVD7 989 aa36.63■■■■□ 3.45
LDB1-204ENST00000490751 NOL8Q76FK4 1167 aaKnown RBP36.63■■■■□ 3.45
LDB1-204ENST00000490751 NCOA7Q8NI08 942 aa36.63■■■■□ 3.45
LDB1-204ENST00000490751 LBHD1Q9BQE6 289 aaPredicted RBP36.63■■■■□ 3.45
LDB1-204ENST00000490751 STARD7Q9NQZ5 370 aa36.63■■■■□ 3.45
LDB1-204ENST00000490751 TLE2Q04725 743 aa36.62■■■■□ 3.45
LDB1-204ENST00000490751 PCSK9Q8NBP7 692 aaKnown RBP36.62■■■■□ 3.45
LDB1-204ENST00000490751 NUP133Q8WUM0 1156 aa36.62■■■■□ 3.45
LDB1-204ENST00000490751 VTA1Q9NP79 307 aa36.62■■■■□ 3.45
LDB1-204ENST00000490751 PDGFCQ9NRA1 345 aa36.62■■■■□ 3.45
LDB1-204ENST00000490751 IFIT3O14879 490 aaKnown RBP36.61■■■■□ 3.45
LDB1-204ENST00000490751 RPS6P62753 249 aaKnown RBP36.61■■■■□ 3.45
LDB1-204ENST00000490751 TAPT1Q6NXT6 567 aa36.61■■■■□ 3.45
LDB1-204ENST00000490751 KIAA1211Q6ZU35 1233 aa36.61■■■■□ 3.45
LDB1-204ENST00000490751 TDHQ8IZJ6 230 aa36.61■■■■□ 3.45
LDB1-204ENST00000490751 STAG2Q8N3U4 1231 aa36.61■■■■□ 3.45
LDB1-204ENST00000490751 PDLIM7Q9NR12 457 aa36.61■■■■□ 3.45
LDB1-204ENST00000490751 LOC102724159A0A0B4J2E5 919 aa36.6■■■■□ 3.45
LDB1-204ENST00000490751 PWP2Q15269 919 aaKnown RBP36.6■■■■□ 3.45
LDB1-204ENST00000490751 QRICH1Q2TAL8 776 aa36.6■■■■□ 3.45
LDB1-204ENST00000490751 GNASQ5JWF2 1037 aa36.6■■■■□ 3.45
LDB1-204ENST00000490751 JMJD4Q9H9V9 463 aa36.6■■■■□ 3.45
LDB1-204ENST00000490751 VAT1LQ9HCJ6 419 aa36.6■■■■□ 3.45
LDB1-204ENST00000490751 GNEQ9Y223 722 aaKnown RBP36.6■■■■□ 3.45
LDB1-204ENST00000490751 ABCB11O95342 1321 aa36.59■■■■□ 3.45
LDB1-204ENST00000490751 ERICH2A1L162 156 aa36.59■■■■□ 3.45
LDB1-204ENST00000490751 ASGR1P07306 291 aa36.59■■■■□ 3.45
LDB1-204ENST00000490751 SMPD1P17405 629 aa36.59■■■■□ 3.45
LDB1-204ENST00000490751 ESYT1Q9BSJ8 1104 aa36.59■■■■□ 3.45
LDB1-204ENST00000490751 SOX1O00570 391 aaPredicted RBP36.58■■■■□ 3.45
LDB1-204ENST00000490751 CTAGE5O15320 804 aa36.58■■■■□ 3.45
LDB1-204ENST00000490751 IQSEC1Q6DN90 963 aa36.58■■■■□ 3.45
LDB1-204ENST00000490751 CHST3Q7LGC8 479 aa36.58■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms