RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 GJA9P57773 515 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 KCNA10Q16322 511 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 CCDC144BQ3MJ40 725 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 AKNAD1Q5T1N1 836 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 KCTD1Q719H9 257 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 CHD1LQ86WJ1 897 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 BADQ92934 168 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 MAF1Q9H063 256 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 MTIF3Q9H2K0 278 aaKnown RBP13.34□□□□□ -0.27
CDCP1-203ENST00000490471 PDLIM7Q9NR12 457 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 PRR12Q9ULL5 1215 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 Q9Y3F1 56 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 SALL3Q9BXA9 1300 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 SYNRGQ9UMZ2 1314 aa13.34□□□□□ -0.27
CDCP1-203ENST00000490471 KIAA0355O15063 1070 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 ADAMTS4O75173 837 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 ICAM1P05362 532 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 TAL1P17542 331 aaPredicted RBP13.33□□□□□ -0.28
CDCP1-203ENST00000490471 FPGSQ05932 587 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 GPATCH4Q5T3I0 446 aaKnown RBP13.33□□□□□ -0.28
CDCP1-203ENST00000490471 SYDE2Q5VT97 1194 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 B4GALNT3Q6L9W6 998 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 NSMFQ6X4W1 530 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 ANKRD33Q7Z3H0 272 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 SMC5Q8IY18 1101 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 CCDC144CPQ8IYA2 1237 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 TMEM199Q8N511 208 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 KLHDC9Q8NEP7 349 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 YTHDC1Q96MU7 727 aaKnown RBP13.33□□□□□ -0.28
CDCP1-203ENST00000490471 RAD50Q92878 1312 aa13.33□□□□□ -0.28
CDCP1-203ENST00000490471 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 ASGR1P07306 291 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 SDSP20132 328 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 SMAD3P84022 425 aaKnown RBP13.32□□□□□ -0.28
CDCP1-203ENST00000490471 NMIQ13287 307 aaPredicted RBP13.32□□□□□ -0.28
CDCP1-203ENST00000490471 PPIGQ13427 754 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDCP1-203ENST00000490471 IMMTQ16891 758 aaKnown RBP13.32□□□□□ -0.28
CDCP1-203ENST00000490471 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
CDCP1-203ENST00000490471 BTNL9Q6UXG8 535 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 DGKHQ86XP1 1220 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 FAM133AQ8N9E0 248 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 AGBL1Q96MI9 1066 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 UPF3AQ9H1J1 476 aaKnown RBP13.32□□□□□ -0.28
CDCP1-203ENST00000490471 OSBPL3Q9H4L5 887 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 CNNM2Q9H8M5 875 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 VTA1Q9NP79 307 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 A1CFQ9NQ94 594 aaKnown RBP13.32□□□□□ -0.28
CDCP1-203ENST00000490471 GPHNQ9NQX3 736 aaPredicted RBP13.32□□□□□ -0.28
CDCP1-203ENST00000490471 IL17RBQ9NRM6 502 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 MTMR10Q9NXD2 777 aa13.32□□□□□ -0.28
CDCP1-203ENST00000490471 TRIOBPQ9H2D6 2365 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 TMEM265A0A087WTH1 108 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 ARVCFO00192 962 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 NOVP48745 357 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 NUBP1P53384 320 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 TRAF1Q13077 416 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 VPS53Q5VIR6 699 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 RUFY2Q8WXA3 655 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 RNPC3Q96LT9 517 aaKnown RBP13.31□□□□□ -0.28
CDCP1-203ENST00000490471 FAM227BQ96M60 508 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 TMEM47Q9BQJ4 181 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 KRT23Q9C075 422 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 RANBP17Q9H2T7 1088 aaKnown RBP13.31□□□□□ -0.28
CDCP1-203ENST00000490471 KAT14Q9H8E8 782 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 CEP290O15078 2479 aa13.31□□□□□ -0.28
CDCP1-203ENST00000490471 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.3□□□□□ -0.28
CDCP1-203ENST00000490471 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.3□□□□□ -0.28
CDCP1-203ENST00000490471 PTPDC1A2A3K4 754 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 NKRFO15226 690 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDCP1-203ENST00000490471 KPNA6O60684 536 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 TIMP1P01033 207 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 SUPT20HL2P0C7V6 817 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 NKX3-2P78367 333 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 NUCB1Q02818 461 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 TRDNQ13061 729 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 SHHQ15465 462 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 KIAA1211Q6ZU35 1233 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 GPCPD1Q9NPB8 672 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 POLR3EQ9NVU0 708 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 CENPFP49454 3210 aa13.3□□□□□ -0.28
CDCP1-203ENST00000490471 A0A0D9SFI3 127 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 TRIM43BA6NCK2 446 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 DYNC1LI2O43237 492 aaPredicted RBP13.29□□□□□ -0.28
CDCP1-203ENST00000490471 NMT2O60551 498 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 CPT1AP50416 773 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 HAND2P61296 217 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 CNTN2Q02246 1040 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 PDE4DQ08499 809 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 CWC27Q6UX04 472 aaKnown RBP13.29□□□□□ -0.28
CDCP1-203ENST00000490471 RNF207Q6ZRF8 634 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 TLK2Q86UE8 772 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 MCF2L2Q86YR7 1114 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 DNERQ8NFT8 737 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 TRIM43Q96BQ3 446 aaPredicted RBP13.29□□□□□ -0.28
CDCP1-203ENST00000490471 CHMP4CQ96CF2 233 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 UBAC1Q9BSL1 405 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 DSCC1Q9BVC3 393 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 ZNF536O15090 1300 aa13.29□□□□□ -0.28
CDCP1-203ENST00000490471 WDR19Q8NEZ3 1342 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms