RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 DNAJC25-GNG10A0A024R161 153 aa13.72□□□□□ -0.21
GGPS1-207ENST00000489692 KDM4AO75164 1064 aa13.72□□□□□ -0.21
GGPS1-207ENST00000489692 C6orf222P0C671 652 aaPredicted RBP13.72□□□□□ -0.21
GGPS1-207ENST00000489692 NUCB2P80303 420 aa13.72□□□□□ -0.21
GGPS1-207ENST00000489692 CCDC178Q5BJE1 867 aa13.72□□□□□ -0.21
GGPS1-207ENST00000489692 ZNF467Q7Z7K2 595 aaPredicted RBP13.72□□□□□ -0.21
GGPS1-207ENST00000489692 CCDC144CPQ8IYA2 1237 aa13.72□□□□□ -0.21
GGPS1-207ENST00000489692 TTC14Q96N46 770 aa13.72□□□□□ -0.21
GGPS1-207ENST00000489692 ABHD16BQ9H3Z7 469 aa13.72□□□□□ -0.21
GGPS1-207ENST00000489692 KAT14Q9H8E8 782 aa13.72□□□□□ -0.21
GGPS1-207ENST00000489692 A1CFQ9NQ94 594 aaKnown RBP13.72□□□□□ -0.21
GGPS1-207ENST00000489692 A0A0G2JMZ2 1700 aa13.72□□□□□ -0.21
GGPS1-207ENST00000489692 CEP290O15078 2479 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 ZNF536O15090 1300 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 MYH8P13535 1937 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 PTPDC1A2A3K4 754 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 ASB14A6NK59 587 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 B4E1Z4 1266 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 DHX16O60231 1041 aaKnown RBP13.71□□□□□ -0.21
GGPS1-207ENST00000489692 PQBP1O60828 265 aaKnown RBP13.71□□□□□ -0.21
GGPS1-207ENST00000489692 ICAM1P05362 532 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 GOLGA8HP0CJ92 632 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 BMP8BP34820 402 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 CCDC144BQ3MJ40 725 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 MUM1L1Q5H9M0 696 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 MAMDC4Q6UXC1 1216 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 KIAA1211Q6ZU35 1233 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 TDHQ8IZJ6 230 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 KCNB2Q92953 911 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 TNPO1Q92973 898 aaKnown RBP13.71□□□□□ -0.21
GGPS1-207ENST00000489692 UBAC1Q9BSL1 405 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 DSCC1Q9BVC3 393 aa13.71□□□□□ -0.21
GGPS1-207ENST00000489692 SYNRGQ9UMZ2 1314 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 A0A1W2PQ45 241 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-207ENST00000489692 A0A1W2PQY0 241 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 DUSP11O75319 330 aaKnown RBP13.7□□□□□ -0.22
GGPS1-207ENST00000489692 PDHBP11177 359 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 NOVP48745 357 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 CUL4AQ13619 759 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 EEPD1Q7L9B9 569 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 LRCH3Q96II8 777 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 KRT23Q9C075 422 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 RANBP17Q9H2T7 1088 aaKnown RBP13.7□□□□□ -0.22
GGPS1-207ENST00000489692 STARD7Q9NQZ5 370 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 PHF24Q9UPV7 400 aa13.7□□□□□ -0.22
GGPS1-207ENST00000489692 ZNF236Q9UL36 1845 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 SOX1O00570 391 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-207ENST00000489692 CALML3P27482 149 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 NEK4P51957 841 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 ACLYP53396 1101 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 TLE2Q04725 743 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 ZNF543Q08ER8 600 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 TRDNQ13061 729 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 BAATQ14032 418 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-207ENST00000489692 KCNA10Q16322 511 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 GNASQ5JWF2 1037 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 BTNL9Q6UXG8 535 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.69□□□□□ -0.22
GGPS1-207ENST00000489692 DGKHQ86XP1 1220 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 FAM133AQ8N9E0 248 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 PNMA1Q8ND90 353 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 INTS4Q96HW7 963 aaKnown RBP13.69□□□□□ -0.22
GGPS1-207ENST00000489692 FGD4Q96M96 766 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 ZSCAN10Q96SZ4 725 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-207ENST00000489692 UBA5Q9GZZ9 404 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 IL25Q9H293 177 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 CNNM2Q9H8M5 875 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 CYP39A1Q9NYL5 469 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 PNMA2Q9UL42 364 aa13.69□□□□□ -0.22
GGPS1-207ENST00000489692 RLFQ13129 1914 aa13.68□□□□□ -0.22
GGPS1-207ENST00000489692 SOWAHBA6NEL2 793 aa13.68□□□□□ -0.22
GGPS1-207ENST00000489692 ADAMTS4O75173 837 aa13.68□□□□□ -0.22
GGPS1-207ENST00000489692 TNFAIP2Q03169 654 aa13.68□□□□□ -0.22
GGPS1-207ENST00000489692 USH1GQ495M9 461 aa13.68□□□□□ -0.22
GGPS1-207ENST00000489692 GPATCH4Q5T3I0 446 aaKnown RBP13.68□□□□□ -0.22
GGPS1-207ENST00000489692 PCSK9Q8NBP7 692 aaKnown RBP13.68□□□□□ -0.22
GGPS1-207ENST00000489692 GLT1D1Q96MS3 346 aa13.68□□□□□ -0.22
GGPS1-207ENST00000489692 PURBQ96QR8 312 aaKnown RBP13.68□□□□□ -0.22
GGPS1-207ENST00000489692 TSEN34Q9BSV6 310 aaKnown RBP13.68□□□□□ -0.22
GGPS1-207ENST00000489692 TM6SF1Q9BZW5 370 aa13.68□□□□□ -0.22
GGPS1-207ENST00000489692 AP5M1Q9H0R1 490 aa13.68□□□□□ -0.22
GGPS1-207ENST00000489692 ADD3Q9UEY8 706 aaKnown RBP13.68□□□□□ -0.22
GGPS1-207ENST00000489692 DDX49Q9Y6V7 483 aaKnown RBP13.68□□□□□ -0.22
GGPS1-207ENST00000489692 TRIOBPQ9H2D6 2365 aa13.68□□□□□ -0.22
GGPS1-207ENST00000489692 GREB1LQ9C091 1923 aaPredicted RBP13.68□□□□□ -0.22
GGPS1-207ENST00000489692 MYADML2A6NDP7 307 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 DCDC2CA8MYV0 355 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 NFIBO00712 420 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 CLTBP09497 229 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 NT5C2P49902 561 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 SKOR2Q2VWA4 1001 aaPredicted RBP13.67□□□□□ -0.22
GGPS1-207ENST00000489692 IFIT1BQ5T764 474 aaKnown RBP13.67□□□□□ -0.22
GGPS1-207ENST00000489692 RNF207Q6ZRF8 634 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 FBXO16Q8IX29 292 aaPredicted RBP13.67□□□□□ -0.22
GGPS1-207ENST00000489692 BADQ92934 168 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 MPHOSPH6Q99547 160 aaKnown RBP13.67□□□□□ -0.22
GGPS1-207ENST00000489692 CPVLQ9H3G5 476 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms