RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 PTGS1P23219 599 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 MCM5P33992 734 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 FOSBP53539 338 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 KLRC3Q07444 240 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 PPARAQ07869 468 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 SBK1Q52WX2 424 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 Q7L0L9 218 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 ZNF589Q86UQ0 364 aaPredicted RBP6.85□□□□□ -1.31
CNOT9-207ENST00000489687 TRMT44Q8IYL2 757 aaKnown RBP6.85□□□□□ -1.31
CNOT9-207ENST00000489687 IFNL3Q8IZI9 196 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 CPXCR1Q8N123 301 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 MB21D1Q8N884 522 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 SHCBP1Q8NEM2 672 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 MAML3Q96JK9 1138 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 NAPBQ9H115 298 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 RAVER2Q9HCJ3 691 aaKnown RBP6.85□□□□□ -1.31
CNOT9-207ENST00000489687 HOXC10Q9NYD6 342 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 ATP11BQ9Y2G3 1177 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 SPTBN5Q9NRC6 3674 aaKnown RBP6.84□□□□□ -1.31
CNOT9-207ENST00000489687 ADCY6O43306 1168 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 PGK1P00558 417 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 IGHA2P01877 340 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 TSPY3P0CV98 308 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 TSPY8P0CW00 308 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 STAT3P40763 770 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 PDE1AP54750 535 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 RTP1P59025 263 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 HAND2P61296 217 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 IRX6P78412 446 aaPredicted RBP6.84□□□□□ -1.31
CNOT9-207ENST00000489687 IKQ13123 557 aaPredicted RBP6.84□□□□□ -1.31
CNOT9-207ENST00000489687 NMIQ13287 307 aaPredicted RBP6.84□□□□□ -1.31
CNOT9-207ENST00000489687 KCTD2Q14681 263 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 TRIM60Q495X7 471 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 RRP12Q5JTH9 1297 aaKnown RBP6.84□□□□□ -1.31
CNOT9-207ENST00000489687 OLFML2BQ68BL8 750 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 KCTD1Q719H9 257 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 RIOX2Q8IUF8 465 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 ZNF454Q8N9F8 522 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 EXOC6Q8TAG9 804 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 PPP1R9BQ96SB3 815 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 GDF15Q99988 308 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 TEX13BQ9BXU2 312 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 MROH8Q9H579 483 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 YY1AP1Q9H869 796 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 PRDM5Q9NQX1 630 aaPredicted RBP6.84□□□□□ -1.31
CNOT9-207ENST00000489687 TOMM22Q9NS69 142 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 MTMR4Q9NYA4 1195 aa6.84□□□□□ -1.31
CNOT9-207ENST00000489687 ZHX1Q9UKY1 873 aaPredicted RBP6.84□□□□□ -1.31
CNOT9-207ENST00000489687 MYO9BQ13459 2157 aa6.84□□□□□ -1.32
CNOT9-207ENST00000489687 MYADML2A6NDP7 307 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 PATL2C9JE40 543 aaKnown RBP6.83□□□□□ -1.32
CNOT9-207ENST00000489687 KBTBD13C9JR72 458 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 RBAK-RBAKDNI3L0D1 243 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 DNM1LO00429 736 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 SEPT4O43236 478 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 ZNF500O60304 480 aaPredicted RBP6.83□□□□□ -1.32
CNOT9-207ENST00000489687 RANBP6O60518 1105 aaKnown RBP6.83□□□□□ -1.32
CNOT9-207ENST00000489687 TTLL1O95922 423 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 GNAT2P19087 354 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 MCCP23508 829 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 ADCYAP1R1P41586 468 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 TFAP4Q01664 338 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 LRRC41Q15345 812 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 CCDC96Q2M329 555 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 SLFN13Q68D06 897 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 GIMAP6Q6P9H5 292 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 CCDC174Q6PII3 467 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 TBC1D10CQ8IV04 446 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 ZNF444Q8N0Y2 327 aaPredicted RBP6.83□□□□□ -1.32
CNOT9-207ENST00000489687 FGD4Q96M96 766 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 CCDC94Q9BW85 323 aaPredicted RBP6.83□□□□□ -1.32
CNOT9-207ENST00000489687 NACAP1Q9BZK3 213 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 UBE2OQ9C0C9 1292 aaKnown RBP6.83□□□□□ -1.32
CNOT9-207ENST00000489687 NYAP2Q9P242 653 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 ADAMTS5Q9UNA0 930 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 STX8Q9UNK0 236 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.83□□□□□ -1.32
CNOT9-207ENST00000489687 PCDHGA10Q9Y5H3 936 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 MUC3AQ02505 3323 aa6.83□□□□□ -1.32
CNOT9-207ENST00000489687 NEDD4P46934 1319 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 FRMPD2Q68DX3 1309 aaPredicted RBP6.82□□□□□ -1.32
CNOT9-207ENST00000489687 SYNRGQ9UMZ2 1314 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 REV3LO60673 3130 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 TSPY2A6NKD2 308 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 TRIM6-TRIM34B2RNG4 842 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 TMEM232C9JQI7 657 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 CLGNO14967 610 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 STRNO43815 780 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 SLC25A27O95847 323 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 IGHDP01880 384 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 SLC16A2P36021 539 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 CNTN2Q02246 1040 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 PDE4BQ07343 736 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 HDAC1Q13547 482 aaPredicted RBP6.82□□□□□ -1.32
CNOT9-207ENST00000489687 CSPP1Q1MSJ5 1256 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 ZNF792Q3KQV3 632 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 C6orf132Q5T0Z8 1188 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 AXDND1Q5T1B0 1012 aaPredicted RBP6.82□□□□□ -1.32
CNOT9-207ENST00000489687 SH3RF1Q7Z6J0 888 aa6.82□□□□□ -1.32
CNOT9-207ENST00000489687 CREBRFQ8IUR6 639 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms