RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 GABPAQ06546 454 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 CSPP1Q1MSJ5 1256 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 SLC43A3Q8NBI5 491 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 MEIS3Q99687 375 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 TRPV6Q9H1D0 765 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 ADAMTS5Q9UNA0 930 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 COL4A4P53420 1690 aaPredicted RBP11.18□□□□□ -0.62
SSBP1-212ENST00000489378 SCN5AQ14524 2016 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 GRIN2DO15399 1336 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
SSBP1-212ENST00000489378 ZAP70P43403 619 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 ACVR2BQ13705 512 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 CCDC144BQ3MJ40 725 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 CXCL17Q6UXB2 119 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 MAMDC4Q6UXC1 1216 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 RPUSD2Q8IZ73 545 aaKnown RBP11.18□□□□□ -0.62
SSBP1-212ENST00000489378 MSL3Q8N5Y2 521 aaKnown RBP11.18□□□□□ -0.62
SSBP1-212ENST00000489378 AGBL1Q96MI9 1066 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 KCNH6Q9H252 994 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 SPC25Q9HBM1 224 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 ZNF214Q9UL59 606 aaPredicted RBP11.18□□□□□ -0.62
SSBP1-212ENST00000489378 SPTBN4Q9H254 2564 aa11.17□□□□□ -0.62
SSBP1-212ENST00000489378 B4GALT4O60513 344 aa11.17□□□□□ -0.62
SSBP1-212ENST00000489378 ALADP13716 330 aa11.17□□□□□ -0.62
SSBP1-212ENST00000489378 IL9P15248 144 aa11.17□□□□□ -0.62
SSBP1-212ENST00000489378 TTC39AQ5SRH9 613 aa11.17□□□□□ -0.62
SSBP1-212ENST00000489378 C6orf132Q5T0Z8 1188 aa11.17□□□□□ -0.62
SSBP1-212ENST00000489378 REPS2Q8NFH8 660 aa11.17□□□□□ -0.62
SSBP1-212ENST00000489378 EPAS1Q99814 870 aa11.17□□□□□ -0.62
SSBP1-212ENST00000489378 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
SSBP1-212ENST00000489378 UBE2ZQ9H832 354 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-212ENST00000489378 VCPKMTQ9H867 229 aa11.17□□□□□ -0.62
SSBP1-212ENST00000489378 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-212ENST00000489378 ASTN1O14525 1302 aa11.16□□□□□ -0.62
SSBP1-212ENST00000489378 DNAJC25-GNG10A0A024R161 153 aa11.16□□□□□ -0.62
SSBP1-212ENST00000489378 VWA5AO00534 786 aa11.16□□□□□ -0.62
SSBP1-212ENST00000489378 WDR46O15213 610 aaKnown RBP11.16□□□□□ -0.62
SSBP1-212ENST00000489378 ITGA7Q13683 1181 aa11.16□□□□□ -0.62
SSBP1-212ENST00000489378 DEFB128Q7Z7B8 93 aa11.16□□□□□ -0.62
SSBP1-212ENST00000489378 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.16□□□□□ -0.62
SSBP1-212ENST00000489378 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
SSBP1-212ENST00000489378 FGD4Q96M96 766 aa11.16□□□□□ -0.62
SSBP1-212ENST00000489378 HDAC5Q9UQL6 1122 aa11.16□□□□□ -0.62
SSBP1-212ENST00000489378 TMX2Q9Y320 296 aa11.16□□□□□ -0.62
SSBP1-212ENST00000489378 NAV1Q8NEY1 1877 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 TRIOO75962 3097 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-212ENST00000489378 IDH1O75874 414 aaKnown RBP11.15□□□□□ -0.62
SSBP1-212ENST00000489378 POLR3DP05423 398 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-212ENST00000489378 PTGS1P23219 599 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 PSMC6P62333 389 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 NKX3-2P78367 333 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 MTX1Q13505 466 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 LEXMQ3ZCV2 418 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 TMEM179Q6ZVK1 233 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 MAGEB6Q8N7X4 407 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 GDPD5Q8WTR4 605 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 PPP1R9AQ9ULJ8 1098 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 RIPK3Q9Y572 518 aa11.15□□□□□ -0.62
SSBP1-212ENST00000489378 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.14□□□□□ -0.63
SSBP1-212ENST00000489378 DCXO43602 365 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 CYP2D6P10635 497 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 AKR1B1P15121 316 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 KCNA5P22460 613 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 COPB2P35606 906 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 ICA1Q05084 483 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 CCDC158Q5M9N0 1113 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 HFE2Q6ZVN8 426 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 HERC6Q8IVU3 1022 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 TET1Q8NFU7 2136 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 SLC9A7Q96T83 725 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 KATNBL1Q9H079 304 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 ABHD16BQ9H3Z7 469 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 ARHGEF10LQ9HCE6 1279 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 MRS2Q9HD23 443 aa11.14□□□□□ -0.63
SSBP1-212ENST00000489378 ZFHX2Q9C0A1 2572 aaPredicted RBP11.14□□□□□ -0.63
SSBP1-212ENST00000489378 LCHNA4D1U4 455 aa11.13□□□□□ -0.63
SSBP1-212ENST00000489378 CABYRO75952 493 aa11.13□□□□□ -0.63
SSBP1-212ENST00000489378 PFKMP08237 780 aa11.13□□□□□ -0.63
SSBP1-212ENST00000489378 CYP2C9P11712 490 aa11.13□□□□□ -0.63
SSBP1-212ENST00000489378 G3BP1Q13283 466 aaKnown RBP eCLIP11.13□□□□□ -0.63
SSBP1-212ENST00000489378 SNRNP48Q6IEG0 339 aaKnown RBP11.13□□□□□ -0.63
SSBP1-212ENST00000489378 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
SSBP1-212ENST00000489378 ARMCX2Q7L311 632 aa11.13□□□□□ -0.63
SSBP1-212ENST00000489378 CERS3Q8IU89 383 aa11.13□□□□□ -0.63
SSBP1-212ENST00000489378 RIOK1Q9BRS2 568 aaKnown RBP11.13□□□□□ -0.63
SSBP1-212ENST00000489378 SMC4Q9NTJ3 1288 aa11.13□□□□□ -0.63
SSBP1-212ENST00000489378 MCM9Q9NXL9 1143 aa11.13□□□□□ -0.63
SSBP1-212ENST00000489378 KIAA1468Q9P260 1216 aa11.13□□□□□ -0.63
SSBP1-212ENST00000489378 PTPRSQ13332 1948 aa11.13□□□□□ -0.63
SSBP1-212ENST00000489378 PTPRZ1P23471 2315 aaPredicted RBP11.13□□□□□ -0.63
SSBP1-212ENST00000489378 CACNA1HO95180 2353 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 MYH8P13535 1937 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 PNMA6EA0A0J9YXQ4 647 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 IGSF3O75054 1194 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 FSCN1Q16658 493 aaKnown RBP11.12□□□□□ -0.63
SSBP1-212ENST00000489378 TNNI3KQ59H18 835 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 FAM83BQ5T0W9 1011 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 NOL8Q76FK4 1167 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms