RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 LRIT3Q3SXY7 679 aa15.78■□□□□ 0.12
LMO4-203ENST00000489303 SKAP1Q86WV1 359 aa15.78■□□□□ 0.12
LMO4-203ENST00000489303 DEFB123Q8N688 67 aa15.78■□□□□ 0.12
LMO4-203ENST00000489303 PLXNA1Q9UIW2 1896 aa15.78■□□□□ 0.12
LMO4-203ENST00000489303 LTBP2Q14767 1821 aa15.78■□□□□ 0.12
LMO4-203ENST00000489303 LAMA4Q16363 1823 aa15.78■□□□□ 0.12
LMO4-203ENST00000489303 DHX16O60231 1041 aaKnown RBP15.77■□□□□ 0.12
LMO4-203ENST00000489303 CDC45O75419 566 aa15.77■□□□□ 0.12
LMO4-203ENST00000489303 RARBP10826 455 aa15.77■□□□□ 0.12
LMO4-203ENST00000489303 AKR1A1P14550 325 aa15.77■□□□□ 0.12
LMO4-203ENST00000489303 LRRC41Q15345 812 aa15.77■□□□□ 0.12
LMO4-203ENST00000489303 MAMDC4Q6UXC1 1216 aa15.77■□□□□ 0.12
LMO4-203ENST00000489303 NSMFQ6X4W1 530 aa15.77■□□□□ 0.12
LMO4-203ENST00000489303 SLC39A5Q6ZMH5 540 aa15.77■□□□□ 0.12
LMO4-203ENST00000489303 CYB5R4Q7L1T6 521 aa15.77■□□□□ 0.12
LMO4-203ENST00000489303 SH3RF1Q7Z6J0 888 aa15.77■□□□□ 0.12
LMO4-203ENST00000489303 LSG1Q9H089 658 aaKnown RBP15.77■□□□□ 0.12
LMO4-203ENST00000489303 A1CFQ9NQ94 594 aaKnown RBP15.77■□□□□ 0.12
LMO4-203ENST00000489303 ASB14A6NK59 587 aa15.76■□□□□ 0.11
LMO4-203ENST00000489303 KBTBD13C9JR72 458 aa15.76■□□□□ 0.11
LMO4-203ENST00000489303 PGK1P00558 417 aa15.76■□□□□ 0.11
LMO4-203ENST00000489303 IRX5P78411 483 aaPredicted RBP15.76■□□□□ 0.11
LMO4-203ENST00000489303 WTAPQ15007 396 aa15.76■□□□□ 0.11
LMO4-203ENST00000489303 TRIM60Q495X7 471 aa15.76■□□□□ 0.11
LMO4-203ENST00000489303 RNF20Q5VTR2 975 aa15.76■□□□□ 0.11
LMO4-203ENST00000489303 UBA5Q9GZZ9 404 aa15.76■□□□□ 0.11
LMO4-203ENST00000489303 ZHX1Q9UKY1 873 aaPredicted RBP15.76■□□□□ 0.11
LMO4-203ENST00000489303 FAM184BQ9ULE4 1060 aa15.76■□□□□ 0.11
LMO4-203ENST00000489303 LAMA2P24043 3122 aaKnown RBP15.75■□□□□ 0.11
LMO4-203ENST00000489303 WDR19Q8NEZ3 1342 aa15.75■□□□□ 0.11
LMO4-203ENST00000489303 ZNF865P0CJ78 1059 aaPredicted RBP15.75■□□□□ 0.11
LMO4-203ENST00000489303 ITGB8P26012 769 aa15.75■□□□□ 0.11
LMO4-203ENST00000489303 SEC23AQ15436 765 aa15.75■□□□□ 0.11
LMO4-203ENST00000489303 MUM1L1Q5H9M0 696 aa15.75■□□□□ 0.11
LMO4-203ENST00000489303 TMEM67Q5HYA8 995 aa15.75■□□□□ 0.11
LMO4-203ENST00000489303 ERICH6BQ5W0A0 696 aa15.75■□□□□ 0.11
LMO4-203ENST00000489303 FAM133AQ8N9E0 248 aa15.75■□□□□ 0.11
LMO4-203ENST00000489303 ABHD16BQ9H3Z7 469 aa15.75■□□□□ 0.11
LMO4-203ENST00000489303 MTMR10Q9NXD2 777 aa15.75■□□□□ 0.11
LMO4-203ENST00000489303 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.75■□□□□ 0.11
LMO4-203ENST00000489303 CYP39A1Q9NYL5 469 aa15.75■□□□□ 0.11
LMO4-203ENST00000489303 PTPDC1A2A3K4 754 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 TRIM43BA6NCK2 446 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 SNAI1O95863 264 aaPredicted RBP15.74■□□□□ 0.11
LMO4-203ENST00000489303 CNTN2Q02246 1040 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 ACVR2BQ13705 512 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 CDC37Q16543 378 aaPredicted RBP15.74■□□□□ 0.11
LMO4-203ENST00000489303 C9orf50Q5SZB4 431 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 ARMCX2Q7L311 632 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 CATIPQ7Z7H3 387 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 RNF180Q86T96 592 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 ADGRF4Q8IZF3 695 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 SLC17A8Q8NDX2 589 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 TRIM43Q96BQ3 446 aaPredicted RBP15.74■□□□□ 0.11
LMO4-203ENST00000489303 MPHOSPH6Q99547 160 aaKnown RBP15.74■□□□□ 0.11
LMO4-203ENST00000489303 XPNPEP3Q9NQH7 507 aa15.74■□□□□ 0.11
LMO4-203ENST00000489303 PRDM5Q9NQX1 630 aaPredicted RBP15.74■□□□□ 0.11
LMO4-203ENST00000489303 ADD3Q9UEY8 706 aaKnown RBP15.74■□□□□ 0.11
LMO4-203ENST00000489303 SLC27A2O14975 620 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 ADCY6O43306 1168 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 MCM5P33992 734 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 SNX17Q15036 470 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 SHHQ15465 462 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 USH1GQ495M9 461 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 CREB3L3Q68CJ9 461 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 STOX1Q6ZVD7 989 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 CHST3Q7LGC8 479 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 CCDC144CPQ8IYA2 1237 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 BADQ92934 168 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 FAM161BQ96MY7 647 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 LBHD1Q9BQE6 289 aaPredicted RBP15.73■□□□□ 0.11
LMO4-203ENST00000489303 MTA3Q9BTC8 594 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 SPC25Q9HBM1 224 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 VAT1LQ9HCJ6 419 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 PDLIM7Q9NR12 457 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 PPP4R2Q9NY27 417 aa15.73■□□□□ 0.11
LMO4-203ENST00000489303 ABCB11O95342 1321 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 MYADML2A6NDP7 307 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 SOWAHBA6NEL2 793 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 B4DLN1 442 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 KLRF2D3W0D1 207 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 MRPL12P52815 198 aaKnown RBP15.72■□□□□ 0.11
LMO4-203ENST00000489303 TLE2Q04725 743 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 BAATQ14032 418 aaPredicted RBP15.72■□□□□ 0.11
LMO4-203ENST00000489303 NECTIN1Q15223 517 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 RNF207Q6ZRF8 634 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 MB21D2Q8IYB1 491 aaPredicted RBP15.72■□□□□ 0.11
LMO4-203ENST00000489303 TMTC2Q8N394 836 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 FGD4Q96M96 766 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 MAF1Q9H063 256 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 CPVLQ9H3G5 476 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 TAF6LQ9Y6J9 622 aa15.72■□□□□ 0.11
LMO4-203ENST00000489303 DDX49Q9Y6V7 483 aaKnown RBP15.72■□□□□ 0.11
LMO4-203ENST00000489303 LOC102724159A0A0B4J2E5 919 aa15.71■□□□□ 0.11
LMO4-203ENST00000489303 NFIBO00712 420 aa15.71■□□□□ 0.11
LMO4-203ENST00000489303 PRC1O43663 620 aa15.71■□□□□ 0.11
LMO4-203ENST00000489303 CALML3P27482 149 aa15.71■□□□□ 0.11
LMO4-203ENST00000489303 TRAF1Q13077 416 aa15.71■□□□□ 0.11
LMO4-203ENST00000489303 GRM4Q14833 912 aa15.71■□□□□ 0.11
LMO4-203ENST00000489303 PWP2Q15269 919 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms