RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 DDX49Q9Y6V7 483 aaKnown RBP29.26■■■□□ 2.27
HMGN1-217ENST00000489072 E7EWF7 191 aa29.25■■■□□ 2.27
HMGN1-217ENST00000489072 ADCY6O43306 1168 aa29.25■■■□□ 2.27
HMGN1-217ENST00000489072 TRDNQ13061 729 aa29.25■■■□□ 2.27
HMGN1-217ENST00000489072 IFIT1BQ5T764 474 aaKnown RBP29.25■■■□□ 2.27
HMGN1-217ENST00000489072 CLEC4DQ8WXI8 215 aa29.25■■■□□ 2.27
HMGN1-217ENST00000489072 WDR19Q8NEZ3 1342 aa29.24■■■□□ 2.27
HMGN1-217ENST00000489072 MYH6P13533 1939 aa29.24■■■□□ 2.27
HMGN1-217ENST00000489072 ADAMTS4O75173 837 aa29.24■■■□□ 2.27
HMGN1-217ENST00000489072 ADCYAP1R1P41586 468 aa29.24■■■□□ 2.27
HMGN1-217ENST00000489072 ASPRV1Q53RT3 343 aa29.24■■■□□ 2.27
HMGN1-217ENST00000489072 BMP2KLQ5H9B9 411 aa29.24■■■□□ 2.27
HMGN1-217ENST00000489072 ESYT1Q9BSJ8 1104 aa29.24■■■□□ 2.27
HMGN1-217ENST00000489072 LSG1Q9H089 658 aaKnown RBP29.24■■■□□ 2.27
HMGN1-217ENST00000489072 BAATQ14032 418 aaPredicted RBP29.23■■■□□ 2.27
HMGN1-217ENST00000489072 CCDC144BQ3MJ40 725 aa29.23■■■□□ 2.27
HMGN1-217ENST00000489072 FERMT2Q96AC1 680 aa29.23■■■□□ 2.27
HMGN1-217ENST00000489072 PHF24Q9UPV7 400 aa29.23■■■□□ 2.27
HMGN1-217ENST00000489072 SYNRGQ9UMZ2 1314 aa29.22■■■□□ 2.27
HMGN1-217ENST00000489072 ASB14A6NK59 587 aa29.22■■■□□ 2.27
HMGN1-217ENST00000489072 PARP1P09874 1014 aaKnown RBP29.22■■■□□ 2.27
HMGN1-217ENST00000489072 RNF180Q86T96 592 aa29.22■■■□□ 2.27
HMGN1-217ENST00000489072 ADGRF4Q8IZF3 695 aa29.22■■■□□ 2.27
HMGN1-217ENST00000489072 PNMA2Q9UL42 364 aa29.22■■■□□ 2.27
HMGN1-217ENST00000489072 RTP1P59025 263 aa29.21■■■□□ 2.27
HMGN1-217ENST00000489072 CDC37Q16543 378 aaPredicted RBP29.21■■■□□ 2.27
HMGN1-217ENST00000489072 SLC30A10Q6XR72 485 aa29.21■■■□□ 2.27
HMGN1-217ENST00000489072 SLC39A5Q6ZMH5 540 aa29.21■■■□□ 2.27
HMGN1-217ENST00000489072 RALYLQ86SE5 291 aaKnown RBP29.21■■■□□ 2.27
HMGN1-217ENST00000489072 NCOA7Q8NI08 942 aa29.21■■■□□ 2.27
HMGN1-217ENST00000489072 GDF15Q99988 308 aa29.21■■■□□ 2.27
HMGN1-217ENST00000489072 SENP2Q9HC62 589 aa29.21■■■□□ 2.27
HMGN1-217ENST00000489072 DUSP11O75319 330 aaKnown RBP29.2■■■□□ 2.26
HMGN1-217ENST00000489072 IRX5P78411 483 aaPredicted RBP29.2■■■□□ 2.26
HMGN1-217ENST00000489072 USH1GQ495M9 461 aa29.2■■■□□ 2.26
HMGN1-217ENST00000489072 KIAA1211Q6ZU35 1233 aa29.2■■■□□ 2.26
HMGN1-217ENST00000489072 CHST3Q7LGC8 479 aa29.2■■■□□ 2.26
HMGN1-217ENST00000489072 STAG2Q8N3U4 1231 aa29.2■■■□□ 2.26
HMGN1-217ENST00000489072 PTPDC1A2A3K4 754 aa29.19■■■□□ 2.26
HMGN1-217ENST00000489072 MYADML2A6NDP7 307 aa29.19■■■□□ 2.26
HMGN1-217ENST00000489072 IFIT3O14879 490 aaKnown RBP29.19■■■□□ 2.26
HMGN1-217ENST00000489072 FXR1P51114 621 aaKnown RBP eCLIP29.19■■■□□ 2.26
HMGN1-217ENST00000489072 ANTXR2P58335 489 aa29.19■■■□□ 2.26
HMGN1-217ENST00000489072 SNX17Q15036 470 aa29.19■■■□□ 2.26
HMGN1-217ENST00000489072 KLHDC9Q8NEP7 349 aa29.19■■■□□ 2.26
HMGN1-217ENST00000489072 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.18■■■□□ 2.26
HMGN1-217ENST00000489072 MAGEA10P43363 369 aaPredicted RBP29.18■■■□□ 2.26
HMGN1-217ENST00000489072 MB21D2Q8IYB1 491 aaPredicted RBP29.18■■■□□ 2.26
HMGN1-217ENST00000489072 MORC4Q8TE76 937 aa29.18■■■□□ 2.26
HMGN1-217ENST00000489072 JMJD4Q9H9V9 463 aa29.18■■■□□ 2.26
HMGN1-217ENST00000489072 MAD2L2Q9UI95 211 aa29.18■■■□□ 2.26
HMGN1-217ENST00000489072 ATP11BQ9Y2G3 1177 aa29.18■■■□□ 2.26
HMGN1-217ENST00000489072 CALML3P27482 149 aa29.17■■■□□ 2.26
HMGN1-217ENST00000489072 QRICH1Q2TAL8 776 aa29.17■■■□□ 2.26
HMGN1-217ENST00000489072 CCSAPQ6IQ19 270 aaPredicted RBP29.17■■■□□ 2.26
HMGN1-217ENST00000489072 RNF207Q6ZRF8 634 aa29.17■■■□□ 2.26
HMGN1-217ENST00000489072 CCDC136Q96JN2 1154 aa29.17■■■□□ 2.26
HMGN1-217ENST00000489072 UPF3AQ9H1J1 476 aaKnown RBP29.17■■■□□ 2.26
HMGN1-217ENST00000489072 VAT1LQ9HCJ6 419 aa29.17■■■□□ 2.26
HMGN1-217ENST00000489072 BAZ2BQ9UIF8 2168 aaKnown RBP29.17■■■□□ 2.26
HMGN1-217ENST00000489072 A0A1W2PQ45 241 aaPredicted RBP29.16■■■□□ 2.26
HMGN1-217ENST00000489072 A0A1W2PQY0 241 aa29.16■■■□□ 2.26
HMGN1-217ENST00000489072 ALDH5A1P51649 535 aaPredicted RBP29.16■■■□□ 2.26
HMGN1-217ENST00000489072 RPS6P62753 249 aaKnown RBP29.16■■■□□ 2.26
HMGN1-217ENST00000489072 TRIM60Q495X7 471 aa29.16■■■□□ 2.26
HMGN1-217ENST00000489072 EEPD1Q7L9B9 569 aa29.16■■■□□ 2.26
HMGN1-217ENST00000489072 FBXO16Q8IX29 292 aaPredicted RBP29.16■■■□□ 2.26
HMGN1-217ENST00000489072 TSEN34Q9BSV6 310 aaKnown RBP29.16■■■□□ 2.26
HMGN1-217ENST00000489072 PDGFCQ9NRA1 345 aa29.16■■■□□ 2.26
HMGN1-217ENST00000489072 LAMA3Q16787 3333 aa29.15■■■□□ 2.26
HMGN1-217ENST00000489072 DHX16O60231 1041 aaKnown RBP29.15■■■□□ 2.26
HMGN1-217ENST00000489072 ACLYP53396 1101 aa29.15■■■□□ 2.26
HMGN1-217ENST00000489072 GJA9P57773 515 aa29.15■■■□□ 2.26
HMGN1-217ENST00000489072 COL9A3Q14050 684 aaPredicted RBP29.15■■■□□ 2.26
HMGN1-217ENST00000489072 WTAPQ15007 396 aa29.15■■■□□ 2.26
HMGN1-217ENST00000489072 KCNA10Q16322 511 aa29.15■■■□□ 2.26
HMGN1-217ENST00000489072 TAPT1Q6NXT6 567 aa29.15■■■□□ 2.26
HMGN1-217ENST00000489072 IGDCC4Q8TDY8 1250 aa29.15■■■□□ 2.26
HMGN1-217ENST00000489072 ADD3Q9UEY8 706 aaKnown RBP29.15■■■□□ 2.26
HMGN1-217ENST00000489072 ERICH2A1L162 156 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 PALM3A6NDB9 673 aaPredicted RBP29.14■■■□□ 2.26
HMGN1-217ENST00000489072 KLRF2D3W0D1 207 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 SLC27A2O14975 620 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 CTAGE5O15320 804 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 C6orf222P0C671 652 aaPredicted RBP29.14■■■□□ 2.26
HMGN1-217ENST00000489072 PTGS1P23219 599 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 CST5P28325 142 aaPredicted RBP29.14■■■□□ 2.26
HMGN1-217ENST00000489072 BMP8BP34820 402 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 TNFAIP2Q03169 654 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 GRM4Q14833 912 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 SLC35G1Q2M3R5 365 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 C1orf53Q5VUE5 145 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 ANO2Q9NQ90 1003 aa29.14■■■□□ 2.26
HMGN1-217ENST00000489072 ABCB11O95342 1321 aa29.14■■■□□ 2.25
HMGN1-217ENST00000489072 LTBP2Q14767 1821 aa29.13■■■□□ 2.25
HMGN1-217ENST00000489072 SART3Q15020 963 aaKnown RBP29.13■■■□□ 2.25
HMGN1-217ENST00000489072 NECTIN1Q15223 517 aa29.13■■■□□ 2.25
HMGN1-217ENST00000489072 TMEM67Q5HYA8 995 aa29.13■■■□□ 2.25
HMGN1-217ENST00000489072 RGS22Q8NE09 1264 aa29.13■■■□□ 2.25
HMGN1-217ENST00000489072 TBC1D5Q92609 795 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms