RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SLFN13Q68D06 897 aa23■■□□□ 1.27
HPS3-206ENST00000486530 TRMT44Q8IYL2 757 aaKnown RBP23■■□□□ 1.27
HPS3-206ENST00000486530 DPF2Q92785 391 aa23■■□□□ 1.27
HPS3-206ENST00000486530 HDAC9Q9UKV0 1011 aa23■■□□□ 1.27
HPS3-206ENST00000486530 FER1L6Q2WGJ9 1857 aa23■■□□□ 1.27
HPS3-206ENST00000486530 SPDYE2BA6NHP3 402 aa23■■□□□ 1.27
HPS3-206ENST00000486530 USP17L10C9JJH3 530 aa23■■□□□ 1.27
HPS3-206ENST00000486530 MYL1P05976 194 aa23■■□□□ 1.27
HPS3-206ENST00000486530 SPDYE6P0CI01 402 aa23■■□□□ 1.27
HPS3-206ENST00000486530 SKILP12757 684 aa23■■□□□ 1.27
HPS3-206ENST00000486530 SLC16A2P36021 539 aa23■■□□□ 1.27
HPS3-206ENST00000486530 SLC1A4P43007 532 aa23■■□□□ 1.27
HPS3-206ENST00000486530 SEPT2Q15019 361 aa23■■□□□ 1.27
HPS3-206ENST00000486530 AGBL3Q8NEM8 1001 aa23■■□□□ 1.27
HPS3-206ENST00000486530 STAMQ92783 540 aa23■■□□□ 1.27
HPS3-206ENST00000486530 CUL5Q93034 780 aa23■■□□□ 1.27
HPS3-206ENST00000486530 BLZF1Q9H2G9 400 aa23■■□□□ 1.27
HPS3-206ENST00000486530 CUEDC2Q9H467 287 aa23■■□□□ 1.27
HPS3-206ENST00000486530 MAGEF1Q9HAY2 307 aa23■■□□□ 1.27
HPS3-206ENST00000486530 PP2D1A8MPX8 630 aa22.99■■□□□ 1.27
HPS3-206ENST00000486530 SPATA1Q5VX52 437 aa22.99■■□□□ 1.27
HPS3-206ENST00000486530 GMCL1P1Q8NEA9 526 aa22.99■■□□□ 1.27
HPS3-206ENST00000486530 MED15Q96RN5 788 aa22.99■■□□□ 1.27
HPS3-206ENST00000486530 GLT8D2Q9H1C3 349 aa22.99■■□□□ 1.27
HPS3-206ENST00000486530 CD44P16070 742 aaKnown RBP22.98■■□□□ 1.27
HPS3-206ENST00000486530 CDK11BP21127 795 aaKnown RBP22.98■■□□□ 1.27
HPS3-206ENST00000486530 SFPQP23246 707 aaKnown RBP eCLIP22.98■■□□□ 1.27
HPS3-206ENST00000486530 MRPL12P52815 198 aaKnown RBP22.98■■□□□ 1.27
HPS3-206ENST00000486530 SHROOM1Q2M3G4 852 aaPredicted RBP22.98■■□□□ 1.27
HPS3-206ENST00000486530 NAALADL2Q58DX5 795 aa22.98■■□□□ 1.27
HPS3-206ENST00000486530 VSTM4Q8IW00 320 aa22.98■■□□□ 1.27
HPS3-206ENST00000486530 CSRNP1Q96S65 589 aa22.98■■□□□ 1.27
HPS3-206ENST00000486530 SPON1Q9HCB6 807 aa22.98■■□□□ 1.27
HPS3-206ENST00000486530 HERC5Q9UII4 1024 aaKnown RBP22.98■■□□□ 1.27
HPS3-206ENST00000486530 BCS1LQ9Y276 419 aa22.98■■□□□ 1.27
HPS3-206ENST00000486530 MYH7BA7E2Y1 1941 aa22.98■■□□□ 1.27
HPS3-206ENST00000486530 PPP1R3GB7ZBB8 358 aa22.98■■□□□ 1.27
HPS3-206ENST00000486530 GDF11O95390 407 aa22.98■■□□□ 1.27
HPS3-206ENST00000486530 CLK2P49760 499 aaKnown RBP22.98■■□□□ 1.27
HPS3-206ENST00000486530 CABP7Q86V35 215 aa22.98■■□□□ 1.27
HPS3-206ENST00000486530 OGFOD1Q8N543 542 aa22.98■■□□□ 1.27
HPS3-206ENST00000486530 NRDCO43847 1150 aa22.97■■□□□ 1.27
HPS3-206ENST00000486530 RPN1P04843 607 aaKnown RBP22.97■■□□□ 1.27
HPS3-206ENST00000486530 SEMA3FQ13275 785 aa22.97■■□□□ 1.27
HPS3-206ENST00000486530 DLGAP5Q15398 846 aa22.97■■□□□ 1.27
HPS3-206ENST00000486530 RBM26Q5T8P6 1007 aaKnown RBP22.97■■□□□ 1.27
HPS3-206ENST00000486530 POTEDQ86YR6 584 aa22.97■■□□□ 1.27
HPS3-206ENST00000486530 SIAH1Q8IUQ4 282 aa22.97■■□□□ 1.27
HPS3-206ENST00000486530 SYNPO2Q9UMS6 1093 aa22.97■■□□□ 1.27
HPS3-206ENST00000486530 RAD21O60216 631 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 CALCRLQ16602 461 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 ZNF658Q5TYW1 1059 aaPredicted RBP22.96■■□□□ 1.27
HPS3-206ENST00000486530 KLHL10Q6JEL2 608 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 ARMCX5Q6P1M9 558 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 MTMR14Q8NCE2 650 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 JDP2Q8WYK2 163 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 GMCL1Q96IK5 515 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 PRIMPOLQ96LW4 560 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 CIAPIN1Q6FI81 312 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 IGSF22Q8N9C0 903 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 MTMR9Q96QG7 549 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 SAMSN1Q9NSI8 373 aaKnown RBP22.96■■□□□ 1.27
HPS3-206ENST00000486530 KBTBD4Q9NVX7 518 aa22.96■■□□□ 1.27
HPS3-206ENST00000486530 ZNF70Q9UC06 446 aaPredicted RBP22.96■■□□□ 1.27
HPS3-206ENST00000486530 TNNI2P48788 182 aa22.95■■□□□ 1.26
HPS3-206ENST00000486530 QRICH1Q2TAL8 776 aa22.95■■□□□ 1.26
HPS3-206ENST00000486530 SMYD4Q8IYR2 804 aaPredicted RBP22.95■■□□□ 1.26
HPS3-206ENST00000486530 PSTPIP2Q9H939 334 aa22.95■■□□□ 1.26
HPS3-206ENST00000486530 INTS13Q9NVM9 706 aa22.95■■□□□ 1.26
HPS3-206ENST00000486530 F5H6K3 240 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 GH2P01242 217 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 TECP42680 631 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 FXR2P51116 673 aaKnown RBP eCLIP22.94■■□□□ 1.26
HPS3-206ENST00000486530 KLRC3Q07444 240 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 KCNB1Q14721 858 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 CDC37Q16543 378 aaPredicted RBP22.94■■□□□ 1.26
HPS3-206ENST00000486530 UBE2SQ16763 222 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 TMEM266Q2M3C6 531 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 PPP4R3AQ6IN85 833 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 NLGN2Q8NFZ4 835 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 FAM151AQ8WW52 585 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 ZBED3Q96IU2 234 aaPredicted RBP22.94■■□□□ 1.26
HPS3-206ENST00000486530 LTBP3Q9NS15 1303 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 TCP10L2B9ZVM9 353 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 PLCG1P19174 1290 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 SPDYE2Q495Y8 402 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 HSP90AA4PQ58FG1 418 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 NAP1L4Q99733 375 aaKnown RBP22.94■■□□□ 1.26
HPS3-206ENST00000486530 RAB34Q9BZG1 259 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.94■■□□□ 1.26
HPS3-206ENST00000486530 KCND1Q9NSA2 647 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 RWDD2AQ9UIY3 292 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 CTNND2Q9UQB3 1225 aa22.94■■□□□ 1.26
HPS3-206ENST00000486530 CLRN2A0PK11 232 aa22.93■■□□□ 1.26
HPS3-206ENST00000486530 TMEM232C9JQI7 657 aa22.93■■□□□ 1.26
HPS3-206ENST00000486530 TDP2O95551 362 aa22.93■■□□□ 1.26
HPS3-206ENST00000486530 NDUFB10O96000 172 aa22.93■■□□□ 1.26
HPS3-206ENST00000486530 KCNJ6P48051 423 aa22.93■■□□□ 1.26
HPS3-206ENST00000486530 PRELPP51888 382 aa22.93■■□□□ 1.26
HPS3-206ENST00000486530 STX17P56962 302 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms