RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
SNX21-211ENST00000486336 CCDC144CPQ8IYA2 1237 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 FAM133AQ8N9E0 248 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 FERMT2Q96AC1 680 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 LENG1Q96BZ8 264 aaPredicted RBP12.89□□□□□ -0.35
SNX21-211ENST00000486336 FGD4Q96M96 766 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 PURBQ96QR8 312 aaKnown RBP12.89□□□□□ -0.35
SNX21-211ENST00000486336 LSG1Q9H089 658 aaKnown RBP12.89□□□□□ -0.35
SNX21-211ENST00000486336 CYP39A1Q9NYL5 469 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
SNX21-211ENST00000486336 NFIBO00712 420 aa12.88□□□□□ -0.35
SNX21-211ENST00000486336 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
SNX21-211ENST00000486336 SYN1P17600 705 aa12.88□□□□□ -0.35
SNX21-211ENST00000486336 ADCYAP1R1P41586 468 aa12.88□□□□□ -0.35
SNX21-211ENST00000486336 CDC37Q16543 378 aaPredicted RBP12.88□□□□□ -0.35
SNX21-211ENST00000486336 TMEM67Q5HYA8 995 aa12.88□□□□□ -0.35
SNX21-211ENST00000486336 RNF180Q86T96 592 aa12.88□□□□□ -0.35
SNX21-211ENST00000486336 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
SNX21-211ENST00000486336 ABHD16BQ9H3Z7 469 aa12.88□□□□□ -0.35
SNX21-211ENST00000486336 DDX49Q9Y6V7 483 aaKnown RBP12.88□□□□□ -0.35
SNX21-211ENST00000486336 SLC27A2O14975 620 aa12.87□□□□□ -0.35
SNX21-211ENST00000486336 CDC45O75419 566 aa12.87□□□□□ -0.35
SNX21-211ENST00000486336 CCDC144BQ3MJ40 725 aa12.87□□□□□ -0.35
SNX21-211ENST00000486336 HABP4Q5JVS0 413 aaKnown RBP12.87□□□□□ -0.35
SNX21-211ENST00000486336 CREB3L3Q68CJ9 461 aa12.87□□□□□ -0.35
SNX21-211ENST00000486336 RNF207Q6ZRF8 634 aa12.87□□□□□ -0.35
SNX21-211ENST00000486336 EEPD1Q7L9B9 569 aa12.87□□□□□ -0.35
SNX21-211ENST00000486336 SENP2Q9HC62 589 aa12.87□□□□□ -0.35
SNX21-211ENST00000486336 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
SNX21-211ENST00000486336 CEP290O15078 2479 aa12.87□□□□□ -0.35
SNX21-211ENST00000486336 FRMPD3Q5JV73 1810 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 KLRF2D3W0D1 207 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 QRICH1Q2TAL8 776 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 SLC30A10Q6XR72 485 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 NFXL1Q6ZNB6 911 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 CATIPQ7Z7H3 387 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
SNX21-211ENST00000486336 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 CLEC4DQ8WXI8 215 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 JMJD4Q9H9V9 463 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 SPC25Q9HBM1 224 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 ADD3Q9UEY8 706 aaKnown RBP12.86□□□□□ -0.35
SNX21-211ENST00000486336 MAD2L2Q9UI95 211 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
SNX21-211ENST00000486336 PRC1O43663 620 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 DUSP11O75319 330 aaKnown RBP12.85□□□□□ -0.35
SNX21-211ENST00000486336 C6orf222P0C671 652 aaPredicted RBP12.85□□□□□ -0.35
SNX21-211ENST00000486336 ANTXR2P58335 489 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 RTP1P59025 263 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 TNFAIP2Q03169 654 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 SLC39A5Q6ZMH5 540 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 VTI1AQ96AJ9 217 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 GPHNQ9NQX3 736 aaPredicted RBP12.85□□□□□ -0.35
SNX21-211ENST00000486336 PCDH10Q9P2E7 1040 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 ALPK3Q96L96 1907 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 MCM3APO60318 1980 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 ABCB11O95342 1321 aa12.85□□□□□ -0.35
SNX21-211ENST00000486336 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.84□□□□□ -0.35
SNX21-211ENST00000486336 PALM3A6NDB9 673 aaPredicted RBP12.84□□□□□ -0.35
SNX21-211ENST00000486336 MCM5P33992 734 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 ALDH5A1P51649 535 aaPredicted RBP12.84□□□□□ -0.35
SNX21-211ENST00000486336 RPS6P62753 249 aaKnown RBP12.84□□□□□ -0.35
SNX21-211ENST00000486336 IRX5P78411 483 aaPredicted RBP12.84□□□□□ -0.35
SNX21-211ENST00000486336 GRM4Q14833 912 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 NECTIN1Q15223 517 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 KCNA10Q16322 511 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 HOMER1Q86YM7 354 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 FBXO16Q8IX29 292 aaPredicted RBP12.84□□□□□ -0.35
SNX21-211ENST00000486336 PIBF1Q8WXW3 757 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 TBC1D5Q92609 795 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
SNX21-211ENST00000486336 PRKAG2Q9UGJ0 569 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 PHF24Q9UPV7 400 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 MRPL11Q9Y3B7 192 aaKnown RBP12.84□□□□□ -0.35
SNX21-211ENST00000486336 ASTN1O14525 1302 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 SYNRGQ9UMZ2 1314 aa12.84□□□□□ -0.35
SNX21-211ENST00000486336 MYADML2A6NDP7 307 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 CCDC69A6NI79 296 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 DYNC1LI2O43237 492 aaPredicted RBP12.83□□□□□ -0.36
SNX21-211ENST00000486336 ADCY6O43306 1168 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 ADAMTS4O75173 837 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 PDE4DQ08499 809 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 TRIM60Q495X7 471 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 GNASQ5JWF2 1037 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 MCF2L2Q86YR7 1114 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 MPHOSPH6Q99547 160 aaKnown RBP12.83□□□□□ -0.36
SNX21-211ENST00000486336 TSEN34Q9BSV6 310 aaKnown RBP12.83□□□□□ -0.36
SNX21-211ENST00000486336 MYL10Q9BUA6 226 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 AMNQ9BXJ7 453 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 LRRC2Q9BYS8 371 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 KATNBL1Q9H079 304 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 AP5M1Q9H0R1 490 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 LY9Q9HBG7 655 aa12.83□□□□□ -0.36
SNX21-211ENST00000486336 A0A1W2PQ45 241 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms