RNA–Protein interactions for RNA: ENST00000485682.6

TSSC4-209, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 2

Gene TSSC4, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-209ENST00000485682 PAK6Q9NQU5 681 aaPredicted RBP20.34■□□□□ 0.85
TSSC4-209ENST00000485682 PFASO15067 1338 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 PLXNA1Q9UIW2 1896 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 ZBTB5O15062 677 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 CYTH3O43739 400 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 SEC24BO95487 1268 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 CYP2C19P33261 490 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 ANAPC15P60006 121 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 FGD1P98174 961 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 APOA5Q6Q788 366 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 RUFY3Q7L099 469 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 FBXO11Q86XK2 927 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 FAM133AQ8N9E0 248 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 FANCBQ8NB91 859 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 CLEC4DQ8WXI8 215 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 TINF2Q9BSI4 451 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 AGXT2Q9BYV1 514 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.33■□□□□ 0.85
TSSC4-209ENST00000485682 BRPF3Q9ULD4 1205 aa20.33■□□□□ 0.85
TSSC4-209ENST00000485682 RBBP6Q7Z6E9 1792 aaKnown RBP20.33■□□□□ 0.84
TSSC4-209ENST00000485682 MYH6P13533 1939 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 POTEB2H3BUK9 544 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 NFIBO00712 420 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 RXRAP19793 462 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 RGS19P49795 217 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 USH1GQ495M9 461 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 C8orf34Q49A92 452 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 NSMFQ6X4W1 530 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 ZNF467Q7Z7K2 595 aaPredicted RBP20.32■□□□□ 0.84
TSSC4-209ENST00000485682 MICU3Q86XE3 530 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 MSL3Q8N5Y2 521 aaKnown RBP20.32■□□□□ 0.84
TSSC4-209ENST00000485682 PIGSQ96S52 555 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 SPZ1Q9BXG8 430 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 AMNQ9BXJ7 453 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 CYP39A1Q9NYL5 469 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 GTF3C3Q9Y5Q9 886 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 CYP46A1Q9Y6A2 500 aa20.32■□□□□ 0.84
TSSC4-209ENST00000485682 ABCB11O95342 1321 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 GJA8P48165 433 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 RCAN1P53805 252 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 MAMDC4Q6UXC1 1216 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 RAB11FIP4Q86YS3 637 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 CCDC144CPQ8IYA2 1237 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 RGS22Q8NE09 1264 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 BRF1Q92994 677 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 FGD4Q96M96 766 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 DEFB118Q96PH6 123 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 MAF1Q9H063 256 aa20.31■□□□□ 0.84
TSSC4-209ENST00000485682 PNMA6FA0A0J9YX94 578 aa20.3■□□□□ 0.84
TSSC4-209ENST00000485682 KLF18A0A0U1RQI7 1052 aa20.3■□□□□ 0.84
TSSC4-209ENST00000485682 ZBTB43O43298 467 aa20.3■□□□□ 0.84
TSSC4-209ENST00000485682 PLEKHA8P1O95397 391 aa20.3■□□□□ 0.84
TSSC4-209ENST00000485682 SGPL1O95470 568 aa20.3■□□□□ 0.84
TSSC4-209ENST00000485682 CAPN2P17655 700 aa20.3■□□□□ 0.84
TSSC4-209ENST00000485682 EN2P19622 333 aaPredicted RBP20.3■□□□□ 0.84
TSSC4-209ENST00000485682 CCND3P30281 292 aaPredicted RBP20.3■□□□□ 0.84
TSSC4-209ENST00000485682 CNTN2Q02246 1040 aa20.3■□□□□ 0.84
TSSC4-209ENST00000485682 TRAF1Q13077 416 aa20.3■□□□□ 0.84
TSSC4-209ENST00000485682 HOMER1Q86YM7 354 aa20.3■□□□□ 0.84
TSSC4-209ENST00000485682 SRBD1Q8N5C6 995 aaKnown RBP20.3■□□□□ 0.84
TSSC4-209ENST00000485682 U2AF1L4Q8WU68 220 aaKnown RBP20.3■□□□□ 0.84
TSSC4-209ENST00000485682 NRBP1Q9UHY1 535 aa20.3■□□□□ 0.84
TSSC4-209ENST00000485682 MRPL11Q9Y3B7 192 aaKnown RBP20.3■□□□□ 0.84
TSSC4-209ENST00000485682 PPP1R11O60927 126 aaPredicted RBP20.29■□□□□ 0.84
TSSC4-209ENST00000485682 CYBAP13498 195 aa20.29■□□□□ 0.84
TSSC4-209ENST00000485682 BAATQ14032 418 aaPredicted RBP20.29■□□□□ 0.84
TSSC4-209ENST00000485682 RNF207Q6ZRF8 634 aa20.29■□□□□ 0.84
TSSC4-209ENST00000485682 TMTC3Q6ZXV5 915 aa20.29■□□□□ 0.84
TSSC4-209ENST00000485682 TRPV1Q8NER1 839 aa20.29■□□□□ 0.84
TSSC4-209ENST00000485682 IL17RAQ96F46 866 aa20.29■□□□□ 0.84
TSSC4-209ENST00000485682 RBM28Q9NW13 759 aaKnown RBP20.29■□□□□ 0.84
TSSC4-209ENST00000485682 PCDHA1Q9Y5I3 950 aa20.29■□□□□ 0.84
TSSC4-209ENST00000485682 SYNGAP1Q96PV0 1343 aa20.28■□□□□ 0.84
TSSC4-209ENST00000485682 PTPDC1A2A3K4 754 aa20.28■□□□□ 0.84
TSSC4-209ENST00000485682 SOWAHBA6NEL2 793 aa20.28■□□□□ 0.84
TSSC4-209ENST00000485682 EVCP57679 992 aa20.28■□□□□ 0.84
TSSC4-209ENST00000485682 APOBRQ0VD83 1088 aa20.28■□□□□ 0.84
TSSC4-209ENST00000485682 PPP2R5BQ15173 497 aa20.28■□□□□ 0.84
TSSC4-209ENST00000485682 RTN1Q16799 776 aa20.28■□□□□ 0.84
TSSC4-209ENST00000485682 RRP36Q96EU6 259 aaKnown RBP20.28■□□□□ 0.84
TSSC4-209ENST00000485682 UPF3BQ9BZI7 483 aaKnown RBP20.28■□□□□ 0.84
TSSC4-209ENST00000485682 CRISPLD2Q9H0B8 497 aa20.28■□□□□ 0.84
TSSC4-209ENST00000485682 BRCA2P51587 3418 aa20.28■□□□□ 0.84
TSSC4-209ENST00000485682 GOLGA8AA7E2F4 631 aa20.27■□□□□ 0.84
TSSC4-209ENST00000485682 GOLGA8BA8MQT2 603 aa20.27■□□□□ 0.84
TSSC4-209ENST00000485682 SNAI1O95863 264 aaPredicted RBP20.27■□□□□ 0.84
TSSC4-209ENST00000485682 RPS6P62753 249 aaKnown RBP20.27■□□□□ 0.84
TSSC4-209ENST00000485682 PRAMEF19Q5SWL8 479 aa20.27■□□□□ 0.84
TSSC4-209ENST00000485682 MCF2L2Q86YR7 1114 aa20.27■□□□□ 0.84
TSSC4-209ENST00000485682 CMTR1Q8N1G2 835 aaKnown RBP20.27■□□□□ 0.84
TSSC4-209ENST00000485682 SHISA4Q96DD7 197 aa20.27■□□□□ 0.84
TSSC4-209ENST00000485682 ADD3Q9UEY8 706 aaKnown RBP20.27■□□□□ 0.84
TSSC4-209ENST00000485682 ASB14A6NK59 587 aa20.26■□□□□ 0.83
TSSC4-209ENST00000485682 CALML3P27482 149 aa20.26■□□□□ 0.83
TSSC4-209ENST00000485682 CNGA1P29973 690 aa20.26■□□□□ 0.83
TSSC4-209ENST00000485682 TOB2Q14106 344 aaPredicted RBP20.26■□□□□ 0.83
TSSC4-209ENST00000485682 SLC30A10Q6XR72 485 aa20.26■□□□□ 0.83
TSSC4-209ENST00000485682 ARMCX2Q7L311 632 aa20.26■□□□□ 0.83
TSSC4-209ENST00000485682 PIBF1Q8WXW3 757 aa20.26■□□□□ 0.83
TSSC4-209ENST00000485682 TBC1D5Q92609 795 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms