RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 SEC23AQ15436 765 aa20.89■□□□□ 0.93
RNF38-207ENST00000484621 ASPRV1Q53RT3 343 aa20.89■□□□□ 0.93
RNF38-207ENST00000484621 ERICH6BQ5W0A0 696 aa20.89■□□□□ 0.93
RNF38-207ENST00000484621 TINF2Q9BSI4 451 aa20.89■□□□□ 0.93
RNF38-207ENST00000484621 DDX20Q9UHI6 824 aaKnown RBP20.89■□□□□ 0.93
RNF38-207ENST00000484621 LAMA2P24043 3122 aaKnown RBP20.88■□□□□ 0.93
RNF38-207ENST00000484621 PARP1P09874 1014 aaKnown RBP20.88■□□□□ 0.93
RNF38-207ENST00000484621 LHX8Q68G74 356 aa20.88■□□□□ 0.93
RNF38-207ENST00000484621 CHST3Q7LGC8 479 aa20.88■□□□□ 0.93
RNF38-207ENST00000484621 UBA5Q9GZZ9 404 aa20.88■□□□□ 0.93
RNF38-207ENST00000484621 SLC27A2O14975 620 aa20.87■□□□□ 0.93
RNF38-207ENST00000484621 TAL1P17542 331 aaPredicted RBP20.87■□□□□ 0.93
RNF38-207ENST00000484621 WTAPQ15007 396 aa20.87■□□□□ 0.93
RNF38-207ENST00000484621 MUM1L1Q5H9M0 696 aa20.87■□□□□ 0.93
RNF38-207ENST00000484621 CREB3L3Q68CJ9 461 aa20.87■□□□□ 0.93
RNF38-207ENST00000484621 CPVLQ9H3G5 476 aa20.87■□□□□ 0.93
RNF38-207ENST00000484621 A1CFQ9NQ94 594 aaKnown RBP20.87■□□□□ 0.93
RNF38-207ENST00000484621 CNPY2Q9Y2B0 182 aa20.87■□□□□ 0.93
RNF38-207ENST00000484621 SEPT4O43236 478 aa20.86■□□□□ 0.93
RNF38-207ENST00000484621 DHX16O60231 1041 aaKnown RBP20.86■□□□□ 0.93
RNF38-207ENST00000484621 TMEM67Q5HYA8 995 aa20.86■□□□□ 0.93
RNF38-207ENST00000484621 NSMFQ6X4W1 530 aa20.86■□□□□ 0.93
RNF38-207ENST00000484621 MSL3Q8N5Y2 521 aaKnown RBP20.86■□□□□ 0.93
RNF38-207ENST00000484621 NRBP1Q9UHY1 535 aa20.86■□□□□ 0.93
RNF38-207ENST00000484621 PNMA2Q9UL42 364 aa20.86■□□□□ 0.93
RNF38-207ENST00000484621 CNTN2Q02246 1040 aa20.85■□□□□ 0.93
RNF38-207ENST00000484621 NECTIN1Q15223 517 aa20.85■□□□□ 0.93
RNF38-207ENST00000484621 RNF20Q5VTR2 975 aa20.85■□□□□ 0.93
RNF38-207ENST00000484621 ANO1Q5XXA6 986 aa20.85■□□□□ 0.93
RNF38-207ENST00000484621 ZNF467Q7Z7K2 595 aaPredicted RBP20.85■□□□□ 0.93
RNF38-207ENST00000484621 MB21D2Q8IYB1 491 aaPredicted RBP20.85■□□□□ 0.93
RNF38-207ENST00000484621 SYNGAP1Q96PV0 1343 aa20.84■□□□□ 0.93
RNF38-207ENST00000484621 ANTXR2P58335 489 aa20.84■□□□□ 0.93
RNF38-207ENST00000484621 FAM109BQ6ICB4 259 aaPredicted RBP20.84■□□□□ 0.93
RNF38-207ENST00000484621 ADGRF4Q8IZF3 695 aa20.84■□□□□ 0.93
RNF38-207ENST00000484621 CDX2Q99626 313 aaPredicted RBP20.84■□□□□ 0.93
RNF38-207ENST00000484621 PRDM6Q9NQX0 595 aa20.84■□□□□ 0.93
RNF38-207ENST00000484621 RAPGEFL1Q9UHV5 662 aa20.84■□□□□ 0.93
RNF38-207ENST00000484621 BAZ2BQ9UIF8 2168 aaKnown RBP20.84■□□□□ 0.93
RNF38-207ENST00000484621 PRUNE2Q8WUY3 3088 aa20.84■□□□□ 0.93
RNF38-207ENST00000484621 WDR19Q8NEZ3 1342 aa20.83■□□□□ 0.93
RNF38-207ENST00000484621 LCTP09848 1927 aa20.83■□□□□ 0.93
RNF38-207ENST00000484621 MCM5P33992 734 aa20.83■□□□□ 0.93
RNF38-207ENST00000484621 CDC37Q16543 378 aaPredicted RBP20.83■□□□□ 0.93
RNF38-207ENST00000484621 MAMDC4Q6UXC1 1216 aa20.83■□□□□ 0.93
RNF38-207ENST00000484621 FAM133AQ8N9E0 248 aa20.83■□□□□ 0.93
RNF38-207ENST00000484621 SENP2Q9HC62 589 aa20.83■□□□□ 0.93
RNF38-207ENST00000484621 VAT1LQ9HCJ6 419 aa20.83■□□□□ 0.93
RNF38-207ENST00000484621 CYP39A1Q9NYL5 469 aa20.83■□□□□ 0.93
RNF38-207ENST00000484621 NFIBO00712 420 aa20.82■□□□□ 0.92
RNF38-207ENST00000484621 PRC1O43663 620 aa20.82■□□□□ 0.92
RNF38-207ENST00000484621 SNAI1O95863 264 aaPredicted RBP20.82■□□□□ 0.92
RNF38-207ENST00000484621 MYCNP04198 464 aaPredicted RBP20.82■□□□□ 0.92
RNF38-207ENST00000484621 USH1GQ495M9 461 aa20.82■□□□□ 0.92
RNF38-207ENST00000484621 CATIPQ7Z7H3 387 aa20.82■□□□□ 0.92
RNF38-207ENST00000484621 STAG2Q8N3U4 1231 aa20.82■□□□□ 0.92
RNF38-207ENST00000484621 ARRDC4Q8NCT1 418 aa20.82■□□□□ 0.92
RNF38-207ENST00000484621 FGD4Q96M96 766 aa20.82■□□□□ 0.92
RNF38-207ENST00000484621 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.82■□□□□ 0.92
RNF38-207ENST00000484621 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
RNF38-207ENST00000484621 PTPDC1A2A3K4 754 aa20.81■□□□□ 0.92
RNF38-207ENST00000484621 KLRF2D3W0D1 207 aa20.81■□□□□ 0.92
RNF38-207ENST00000484621 ZNF865P0CJ78 1059 aaPredicted RBP20.81■□□□□ 0.92
RNF38-207ENST00000484621 RARBP10826 455 aa20.81■□□□□ 0.92
RNF38-207ENST00000484621 ARMCX2Q7L311 632 aa20.81■□□□□ 0.92
RNF38-207ENST00000484621 IGDCC4Q8TDY8 1250 aa20.81■□□□□ 0.92
RNF38-207ENST00000484621 MYLIPQ8WY64 445 aa20.81■□□□□ 0.92
RNF38-207ENST00000484621 MAD2L2Q9UI95 211 aa20.81■□□□□ 0.92
RNF38-207ENST00000484621 SOWAHBA6NEL2 793 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 ASB14A6NK59 587 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 AKR1A1P14550 325 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 BAATQ14032 418 aaPredicted RBP20.8■□□□□ 0.92
RNF38-207ENST00000484621 GRM4Q14833 912 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 QRICH1Q2TAL8 776 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 C9orf50Q5SZB4 431 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 GJC2Q5T442 439 aaPredicted RBP20.8■□□□□ 0.92
RNF38-207ENST00000484621 NFXL1Q6ZNB6 911 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 CCDC144CPQ8IYA2 1237 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 MAFAQ8NHW3 353 aaPredicted RBP20.8■□□□□ 0.92
RNF38-207ENST00000484621 CLEC4DQ8WXI8 215 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 MTA3Q9BTC8 594 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 TTYH1Q9H313 450 aaPredicted RBP20.8■□□□□ 0.92
RNF38-207ENST00000484621 ABHD16BQ9H3Z7 469 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 JMJD4Q9H9V9 463 aa20.8■□□□□ 0.92
RNF38-207ENST00000484621 PALM3A6NDB9 673 aaPredicted RBP20.79■□□□□ 0.92
RNF38-207ENST00000484621 KBTBD13C9JR72 458 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 DNM1LO00429 736 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 ATN1P54259 1190 aaPredicted RBP20.79■□□□□ 0.92
RNF38-207ENST00000484621 ACVR2BQ13705 512 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 ZNF697Q5TEC3 545 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 RNF207Q6ZRF8 634 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 FBXO11Q86XK2 927 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 NUP133Q8WUM0 1156 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 TMEM87BQ96K49 555 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 LY9Q9HBG7 655 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 XPNPEP3Q9NQH7 507 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 GPHNQ9NQX3 736 aaPredicted RBP20.79■□□□□ 0.92
RNF38-207ENST00000484621 FAM184BQ9ULE4 1060 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 DNAH12Q6ZR08 3092 aa20.79■□□□□ 0.92
RNF38-207ENST00000484621 ABCB11O95342 1321 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms