RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.09■□□□□ 0.01
HDAC1-209ENST00000484305 ZHX1Q9UKY1 873 aaPredicted RBP15.09■□□□□ 0.01
HDAC1-209ENST00000484305 DDX49Q9Y6V7 483 aaKnown RBP15.09■□□□□ 0.01
HDAC1-209ENST00000484305 ASTN1O14525 1302 aa15.09■□□□□ 0.01
HDAC1-209ENST00000484305 KBTBD13C9JR72 458 aa15.08■□□□□ 0
HDAC1-209ENST00000484305 IFIT3O14879 490 aaKnown RBP15.08■□□□□ 0
HDAC1-209ENST00000484305 PGK1P00558 417 aa15.08■□□□□ 0
HDAC1-209ENST00000484305 ANTXR2P58335 489 aa15.08■□□□□ 0
HDAC1-209ENST00000484305 ACVR2BQ13705 512 aa15.08■□□□□ 0
HDAC1-209ENST00000484305 BAATQ14032 418 aaPredicted RBP15.08■□□□□ 0
HDAC1-209ENST00000484305 STAG2Q8N3U4 1231 aa15.08■□□□□ 0
HDAC1-209ENST00000484305 CLEC4DQ8WXI8 215 aa15.08■□□□□ 0
HDAC1-209ENST00000484305 ABHD16BQ9H3Z7 469 aa15.08■□□□□ 0
HDAC1-209ENST00000484305 FAM184BQ9ULE4 1060 aa15.08■□□□□ 0
HDAC1-209ENST00000484305 WDR19Q8NEZ3 1342 aa15.08■□□□□ 0
HDAC1-209ENST00000484305 CDC37Q16543 378 aaPredicted RBP15.07■□□□□ 0
HDAC1-209ENST00000484305 CCDC144BQ3MJ40 725 aa15.07■□□□□ 0
HDAC1-209ENST00000484305 HABP4Q5JVS0 413 aaKnown RBP15.07■□□□□ 0
HDAC1-209ENST00000484305 CHRDL2Q6WN34 429 aa15.07■□□□□ 0
HDAC1-209ENST00000484305 MB21D2Q8IYB1 491 aaPredicted RBP15.07■□□□□ 0
HDAC1-209ENST00000484305 KATNBL1Q9H079 304 aa15.07■□□□□ 0
HDAC1-209ENST00000484305 VAT1LQ9HCJ6 419 aa15.07■□□□□ 0
HDAC1-209ENST00000484305 ANO2Q9NQ90 1003 aa15.07■□□□□ 0
HDAC1-209ENST00000484305 BAZ2BQ9UIF8 2168 aaKnown RBP15.07■□□□□ 0
HDAC1-209ENST00000484305 LRRC37A2A6NM11 1700 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 ERICH2A1L162 156 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 PTPDC1A2A3K4 754 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 ASB14A6NK59 587 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 SLC27A2O14975 620 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 ADCY6O43306 1168 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 NEFLP07196 543 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 SYN1P17600 705 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 ADCYAP1R1P41586 468 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 ATN1P54259 1190 aaPredicted RBP15.06■□□□□ 0
HDAC1-209ENST00000484305 COL9A3Q14050 684 aaPredicted RBP15.06■□□□□ 0
HDAC1-209ENST00000484305 WTAPQ15007 396 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 NECTIN1Q15223 517 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 USH1GQ495M9 461 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 SLC30A10Q6XR72 485 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 IGDCC4Q8TDY8 1250 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 FERMT2Q96AC1 680 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 JMJD4Q9H9V9 463 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 MAD2L2Q9UI95 211 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 PNMA2Q9UL42 364 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 ZMYND8Q9ULU4 1186 aaPredicted RBP15.06■□□□□ 0
HDAC1-209ENST00000484305 DNAH12Q6ZR08 3092 aa15.06■□□□□ 0
HDAC1-209ENST00000484305 KLRF2D3W0D1 207 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 DHX16O60231 1041 aaKnown RBP15.05■□□□□ -0
HDAC1-209ENST00000484305 ADAMTS4O75173 837 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 KCNA4P22459 653 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 CALML3P27482 149 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 SART3Q15020 963 aaKnown RBP15.05■□□□□ -0
HDAC1-209ENST00000484305 QRICH1Q2TAL8 776 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 TMEM67Q5HYA8 995 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 CREB3L3Q68CJ9 461 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 RNF207Q6ZRF8 634 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 RNF180Q86T96 592 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 PCDH10Q9P2E7 1040 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 SYNRGQ9UMZ2 1314 aa15.05■□□□□ -0
HDAC1-209ENST00000484305 TRIOBPQ9H2D6 2365 aa15.04■□□□□ -0
HDAC1-209ENST00000484305 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.04■□□□□ -0
HDAC1-209ENST00000484305 PALM3A6NDB9 673 aaPredicted RBP15.04■□□□□ -0
HDAC1-209ENST00000484305 MYADML2A6NDP7 307 aa15.04■□□□□ -0
HDAC1-209ENST00000484305 DUSP11O75319 330 aaKnown RBP15.04■□□□□ -0
HDAC1-209ENST00000484305 CDC45O75419 566 aa15.04■□□□□ -0
HDAC1-209ENST00000484305 RPS6P62753 249 aaKnown RBP15.04■□□□□ -0
HDAC1-209ENST00000484305 IRX5P78411 483 aaPredicted RBP15.04■□□□□ -0
HDAC1-209ENST00000484305 GRM4Q14833 912 aa15.04■□□□□ -0
HDAC1-209ENST00000484305 SLC39A5Q6ZMH5 540 aa15.04■□□□□ -0
HDAC1-209ENST00000484305 EEPD1Q7L9B9 569 aa15.04■□□□□ -0
HDAC1-209ENST00000484305 MORC4Q8TE76 937 aa15.04■□□□□ -0
HDAC1-209ENST00000484305 PRO3102Q9H379 93 aa15.04■□□□□ -0
HDAC1-209ENST00000484305 GPHNQ9NQX3 736 aaPredicted RBP15.04■□□□□ -0
HDAC1-209ENST00000484305 RBM27Q9P2N5 1060 aaKnown RBP15.04■□□□□ -0
HDAC1-209ENST00000484305 PHF24Q9UPV7 400 aa15.04■□□□□ -0
HDAC1-209ENST00000484305 ABCB11O95342 1321 aa15.03■□□□□ -0
HDAC1-209ENST00000484305 PRC1O43663 620 aa15.03■□□□□ -0
HDAC1-209ENST00000484305 ALDH5A1P51649 535 aaPredicted RBP15.03■□□□□ -0
HDAC1-209ENST00000484305 RTP1P59025 263 aa15.03■□□□□ -0
HDAC1-209ENST00000484305 TROAPQ12815 778 aa15.03■□□□□ -0
HDAC1-209ENST00000484305 SLC35G1Q2M3R5 365 aa15.03■□□□□ -0
HDAC1-209ENST00000484305 CASC1Q6TDU7 716 aa15.03■□□□□ -0
HDAC1-209ENST00000484305 FBXO16Q8IX29 292 aaPredicted RBP15.03■□□□□ -0
HDAC1-209ENST00000484305 KLHDC9Q8NEP7 349 aa15.03■□□□□ -0
HDAC1-209ENST00000484305 TBC1D5Q92609 795 aa15.03■□□□□ -0
HDAC1-209ENST00000484305 LY9Q9HBG7 655 aa15.03■□□□□ -0
HDAC1-209ENST00000484305 PDGFCQ9NRA1 345 aa15.03■□□□□ -0
HDAC1-209ENST00000484305 ADD3Q9UEY8 706 aaKnown RBP15.03■□□□□ -0
HDAC1-209ENST00000484305 MCM5P33992 734 aa15.02■□□□□ -0
HDAC1-209ENST00000484305 TNFAIP2Q03169 654 aa15.02■□□□□ -0
HDAC1-209ENST00000484305 KCNA10Q16322 511 aa15.02■□□□□ -0
HDAC1-209ENST00000484305 CCSAPQ6IQ19 270 aaPredicted RBP15.02■□□□□ -0
HDAC1-209ENST00000484305 TAPT1Q6NXT6 567 aa15.02■□□□□ -0
HDAC1-209ENST00000484305 FBXO11Q86XK2 927 aa15.02■□□□□ -0
HDAC1-209ENST00000484305 RGS22Q8NE09 1264 aa15.02■□□□□ -0
HDAC1-209ENST00000484305 MTMR8Q96EF0 704 aa15.02■□□□□ -0
HDAC1-209ENST00000484305 UPF3AQ9H1J1 476 aaKnown RBP15.02■□□□□ -0
HDAC1-209ENST00000484305 ATP11BQ9Y2G3 1177 aa15.02■□□□□ -0
HDAC1-209ENST00000484305 RANBP2P49792 3224 aaKnown RBP15.01□□□□□ -0.01
HDAC1-209ENST00000484305 A0A1W2PQ45 241 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms