RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 ESR1P03372 595 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 POU3F3P20264 500 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-214ENST00000483925 ETV3P41162 512 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 FAM50AQ14320 339 aaKnown RBP5.77□□□□□ -1.49
PTCD3-214ENST00000483925 RALGPS1Q5JS13 557 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 AXDND1Q5T1B0 1012 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-214ENST00000483925 SLC6A19Q695T7 634 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 LILRA6Q6PI73 481 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 SPATC1Q76KD6 591 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 AMIGO3Q86WK7 504 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 TEX2Q8IWB9 1127 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 MRPL41Q8IXM3 137 aaKnown RBP5.77□□□□□ -1.49
PTCD3-214ENST00000483925 RAVER1Q8IY67 606 aaKnown RBP5.77□□□□□ -1.49
PTCD3-214ENST00000483925 C19orf47Q8N9M1 422 aaKnown RBP5.77□□□□□ -1.49
PTCD3-214ENST00000483925 ATL2Q8NHH9 583 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 GATAD2BQ8WXI9 593 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 MYLIPQ8WY64 445 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 SCYL1Q96KG9 808 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 ZNF700Q9H0M5 742 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 MIR1-1HGQ9H1L0 117 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 ARNT2Q9HBZ2 717 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 TMEM59LQ9UK28 342 aa5.77□□□□□ -1.49
PTCD3-214ENST00000483925 PDE8AO60658 829 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 WDHD1O75717 1129 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-214ENST00000483925 F13A1P00488 732 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 PGRP06401 933 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 ATF3P18847 181 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 HK2P52789 917 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 ATG14Q6ZNE5 492 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 EEPD1Q7L9B9 569 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 C11orf96Q7Z7L8 435 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 CREG2Q8IUH2 290 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 FAM178BQ8IXR5 827 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 MYO1HQ8N1T3 1032 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 IL17RAQ96F46 866 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 KCNK12Q9HB15 430 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 TJP2Q9UDY2 1190 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 MAPRE3Q9UPY8 281 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 PCDHB5Q9Y5E4 795 aa5.76□□□□□ -1.49
PTCD3-214ENST00000483925 A0A087X0B3 334 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 TCAF2A6NFQ2 919 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 IFRD1O00458 451 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-214ENST00000483925 HPXP02790 462 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 MED14OSP0DP75 135 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 GUCY2FP51841 1108 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 ERVFC1P60507 584 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 IRX6P78412 446 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-214ENST00000483925 DHX8Q14562 1220 aaKnown RBP5.75□□□□□ -1.49
PTCD3-214ENST00000483925 KCNA10Q16322 511 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 C21orf62-AS1Q17RA5 79 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 BNC2Q6ZN30 1099 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-214ENST00000483925 LSRQ86X29 649 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-214ENST00000483925 MCATQ8IVS2 390 aaKnown RBP5.75□□□□□ -1.49
PTCD3-214ENST00000483925 CHPFQ8IZ52 775 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 KCNN1Q92952 543 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 TMEM87BQ96K49 555 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 DPH2Q9BQC3 489 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-214ENST00000483925 ADAMTS10Q9H324 1103 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 TRIT1Q9H3H1 467 aaKnown RBP5.75□□□□□ -1.49
PTCD3-214ENST00000483925 CD320Q9NPF0 282 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 GNL3LQ9NVN8 582 aaKnown RBP5.75□□□□□ -1.49
PTCD3-214ENST00000483925 SLC12A7Q9Y666 1083 aa5.75□□□□□ -1.49
PTCD3-214ENST00000483925 E2F8A0AVK6 867 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 SHTN1A0MZ66 631 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 FAM221AA4D161 298 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 IQCA1LA6NCM1 817 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 GOLGA6CA6NDK9 693 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 GOLGA6BA6NDN3 693 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 RBAK-RBAKDNI3L0D1 243 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 ETV2O00321 342 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-214ENST00000483925 IRS4O14654 1257 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-214ENST00000483925 MAFGO15525 162 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 BPNT1O95861 308 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 SCGB1D2O95969 90 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 GOLGA6DP0CG33 693 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 GLDCP23378 1020 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 TPP2P29144 1249 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-214ENST00000483925 PDE4BQ07343 736 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 MCL1Q07820 350 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 PABPC4Q13310 644 aaKnown RBP eCLIP5.74□□□□□ -1.49
PTCD3-214ENST00000483925 SYCP2LQ5T4T6 812 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 CIAPIN1Q6FI81 312 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 GK5Q6ZS86 529 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 TTLL10Q6ZVT0 673 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 REC114Q7Z4M0 266 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 RNF180Q86T96 592 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 LRRC47Q8N1G4 583 aaKnown RBP5.74□□□□□ -1.49
PTCD3-214ENST00000483925 ZBTB38Q8NAP3 1195 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-214ENST00000483925 FBXO27Q8NI29 283 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 Q96M66 194 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 NAP1L4Q99733 375 aaKnown RBP5.74□□□□□ -1.49
PTCD3-214ENST00000483925 SPATA9Q9BWV2 254 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 FAM126AQ9BYI3 521 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-214ENST00000483925 DUSP15Q9H1R2 295 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-214ENST00000483925 BRMS1Q9HCU9 246 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 GOLGA6AQ9NYA3 693 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 RAPGEFL1Q9UHV5 662 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 PNMA2Q9UL42 364 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 CEP131Q9UPN4 1083 aa5.74□□□□□ -1.49
PTCD3-214ENST00000483925 CCDC189A1A4V9 331 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms