RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-208ENST00000483564 NFU1Q9UMS0 254 aa10.25□□□□□ -0.77
GABRE-208ENST00000483564 CAPN6Q9Y6Q1 641 aa10.25□□□□□ -0.77
GABRE-208ENST00000483564 NCK2O43639 380 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 GLI1P08151 1106 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 NR1D1P20393 614 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 SSRP1Q08945 709 aaKnown RBP10.24□□□□□ -0.77
GABRE-208ENST00000483564 QPCTQ16769 361 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 ALS2CLQ60I27 953 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 KDM7AQ6ZMT4 941 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 CCDC121Q6ZUS5 278 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 SH3RF1Q7Z6J0 888 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 SPATS2Q86XZ4 545 aaKnown RBP10.24□□□□□ -0.77
GABRE-208ENST00000483564 IRF2BP1Q8IU81 584 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 CCDC50Q8IVM0 306 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 IQCKQ8N0W5 287 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 IP6K1Q92551 441 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 EPAS1Q99814 870 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 BATF3Q9NR55 127 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 HOMER3Q9NSC5 361 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 HEG1Q9ULI3 1381 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 A0A1B0GVG6 124 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 ZNF263O14978 683 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 SEMA3EO15041 775 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 PLEKP08567 350 aaPredicted RBP10.24□□□□□ -0.77
GABRE-208ENST00000483564 MDH1P40925 334 aaKnown RBP10.24□□□□□ -0.77
GABRE-208ENST00000483564 EPHB4P54760 987 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 PLCB4Q15147 1175 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 CCDC70Q6NSX1 233 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 CHADLQ6NUI6 762 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 IGDCC4Q8TDY8 1250 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 NELFBQ8WX92 580 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 HOOK2Q96ED9 719 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 MS4A14Q96JA4 679 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 KDM4CQ9H3R0 1056 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 NHEJ1Q9H9Q4 299 aaPredicted RBP10.24□□□□□ -0.77
GABRE-208ENST00000483564 STIM2Q9P246 746 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 LRWD1Q9UFC0 647 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 SNX12Q9UMY4 172 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 GDAQ9Y2T3 454 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 L3MBTL1Q9Y468 752 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 PCDHGC5Q9Y5F6 944 aa10.24□□□□□ -0.77
GABRE-208ENST00000483564 ZNF335Q9H4Z2 1342 aaPredicted RBP10.23□□□□□ -0.77
GABRE-208ENST00000483564 SMNDC1O75940 238 aaKnown RBP eCLIP10.23□□□□□ -0.778e-7■□□□□ 8.5
GABRE-208ENST00000483564 MOCS3O95396 460 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 ABCD1P33897 745 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 ZAP70P43403 619 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 PMS1P54277 932 aaKnown RBP10.23□□□□□ -0.77
GABRE-208ENST00000483564 SAFBQ15424 915 aaKnown RBP eCLIP10.23□□□□□ -0.77
GABRE-208ENST00000483564 RILPL1Q5EBL4 403 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 C1orf141Q5JVX7 400 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 CFAP58Q5T655 872 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 ZNF579Q8NAF0 562 aaKnown RBP10.23□□□□□ -0.77
GABRE-208ENST00000483564 CYFIP2Q96F07 1278 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 GSDMAQ96QA5 445 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 DNAJC7Q99615 494 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 MTRQ99707 1265 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 ZKSCAN3Q9BRR0 538 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 NUP58Q9BVL2 599 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 RBM12Q9NTZ6 932 aaKnown RBP10.23□□□□□ -0.77
GABRE-208ENST00000483564 MYH8P13535 1937 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 hCG_1642624A0A1W2PR95 340 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 SPDYE3A6NKU9 549 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 FAM107AO95990 144 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 TMOD1P28289 359 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 DNA2P51530 1060 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 EMBQ6PCB8 327 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 ARMCX6Q7L4S7 300 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 SPATA21Q7Z572 469 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 MYLK4Q86YV6 388 aaPredicted RBP10.23□□□□□ -0.77
GABRE-208ENST00000483564 ANKRD13CQ8N6S4 541 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 MB21D1Q8N884 522 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 TBC1D5Q92609 795 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 PAGR1Q9BTK6 254 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 TMX4Q9H1E5 349 aaPredicted RBP10.23□□□□□ -0.77
GABRE-208ENST00000483564 SUDS3Q9H7L9 328 aaPredicted RBP10.23□□□□□ -0.77
GABRE-208ENST00000483564 LY9Q9HBG7 655 aa10.23□□□□□ -0.77
GABRE-208ENST00000483564 XDHP47989 1333 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 RASSF10A6NK89 507 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 NKRFO15226 690 aaKnown RBP eCLIP10.22□□□□□ -0.77
GABRE-208ENST00000483564 GCP02774 474 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 PARP1P09874 1014 aaKnown RBP10.22□□□□□ -0.77
GABRE-208ENST00000483564 NEFHP12036 1026 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 PAPOLAP51003 745 aaKnown RBP10.22□□□□□ -0.77
GABRE-208ENST00000483564 KRT83P78385 493 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 FOXO4P98177 505 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 TSR1Q2NL82 804 aaKnown RBP10.22□□□□□ -0.77
GABRE-208ENST00000483564 TMEM67Q5HYA8 995 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 SHISA4Q96DD7 197 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 NOD2Q9HC29 1040 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 GNAT1P11488 350 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 CASP7P55210 303 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 PAK1Q13153 545 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 NCAPG2Q86XI2 1143 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 OR2W6PQ8NHA6 318 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 MAGEC3Q8TD91 643 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 CCDC85AQ96PX6 553 aaPredicted RBP10.22□□□□□ -0.77
GABRE-208ENST00000483564 OSBPL9Q96SU4 736 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 EPB41L5Q9HCM4 733 aa10.22□□□□□ -0.77
GABRE-208ENST00000483564 PAPOLBQ9NRJ5 636 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms